BLASTX nr result

ID: Bupleurum21_contig00014519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014519
         (1347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochond...   429   e-117
ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloropla...   421   e-115
ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putat...   410   e-112
ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloropla...   384   e-104
ref|XP_002313020.1| inner membrane protein [Populus trichocarpa]...   350   5e-94

>ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochondrial-like [Cucumis
            sativus]
          Length = 573

 Score =  429 bits (1102), Expect = e-117
 Identities = 213/383 (55%), Positives = 267/383 (69%), Gaps = 1/383 (0%)
 Frame = +1

Query: 55   RSYRDQFMLFRNERRAVGCPSFLWLGAYISVQFPCFLLWMTTIRKMSLDNYTGFECGGAL 234
            RSY DQ  LFR ER+A+GCPSFLW  AY  +Q PCFLLWM TIRKMSLD+Y GF+ GGAL
Sbjct: 191  RSYIDQISLFRKERKAIGCPSFLWFAAYFFIQVPCFLLWMVTIRKMSLDHYPGFDYGGAL 250

Query: 235  WFQNLTELPHGVSGSIFPLLIAGLHFASVQISFHTASAGKISGLLGFLVKGYKFYLNAMT 414
            WFQNLTE PHGV G IFP LIA LHF +VQ+SF  +S  K +G++G L K YK YLN +T
Sbjct: 251  WFQNLTEYPHGVFGPIFPFLIASLHFINVQLSFRKSSLEKETGIIGILAKYYKLYLNLLT 310

Query: 415  LPILCAAFCVPQGSLVYWLTNSSVTLIQQLCLNDTNVRQRLGLPEKKDLVPAKDTHNLVA 594
            +P+    +C+PQGSLVYW+TNSS T IQQL L    VR +LGLP +   V          
Sbjct: 311  VPLFFIGYCIPQGSLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNN 370

Query: 595  PVSFS-DFSHKQRKVSIKSRSPDELVMLSVQLLAKGHXXXXXXXXXXXXXXDPEHTRALI 771
            P     + + K +K+S++  SP EL+ LSVQLL+KG               +PE+ RAL+
Sbjct: 371  PGKIPLETTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALV 430

Query: 772  IMGQTLFQDGVLEEAIDHLERAISKLFLLGYPAEVKEVDLLIVASQWAGSCYVQQGKYTE 951
            +MGQTL Q+    EA  +LERAISKLFL G+P EV+ VDLLI+ASQWAG  +++QGK  E
Sbjct: 431  VMGQTLLQNAQPAEATVYLERAISKLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMVE 490

Query: 952  ALIHFERLGHIKEPEESRSKSHYYDGLVMLASALSHEDRKAEAVKYLRKAAEYNTSYKVY 1131
             + H ER+ ++KEPEE +SK+HYYDGLV+LASAL +E RKAEA KYL+ A  YN +YK Y
Sbjct: 491  GIAHLERVANLKEPEEPKSKAHYYDGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKEY 550

Query: 1132 LEELENEEGNFASDLVNSRRGDY 1200
            L++ E++      DLV+SRRGDY
Sbjct: 551  LDQCEDDNDKLVGDLVSSRRGDY 573


>ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloroplastic [Vitis vinifera]
            gi|297735304|emb|CBI17666.3| unnamed protein product
            [Vitis vinifera]
          Length = 572

 Score =  421 bits (1082), Expect = e-115
 Identities = 218/406 (53%), Positives = 281/406 (69%), Gaps = 24/406 (5%)
 Frame = +1

Query: 55   RSYRDQFMLFRNERRAVGCPSFLWLGAYISVQFPCFLLWMTTIRKMSLDNYTGFECGGAL 234
            RSY DQ  LFR E+RA+GCPSFLW  A +S Q PCF+LWM +IR MSLD++ GF+ GGAL
Sbjct: 169  RSYFDQISLFRKEKRAIGCPSFLWFLASLSTQVPCFILWMMSIRWMSLDHHPGFDSGGAL 228

Query: 235  WFQNLTELPHGVSGSIFPLLIAGLHFASVQISFHTASAGKISGLLGFLVKGYKFYLNAMT 414
            WFQNLTE P+GV G IFP+LI+GLHF +VQISF T+S G++ GLLG L K YKFYL  +T
Sbjct: 229  WFQNLTEFPNGVLGPIFPILISGLHFINVQISFSTSSVGQVPGLLGLLAKYYKFYLEILT 288

Query: 415  LPILCAAFCVPQGSLVYWLTNSSVTLIQQLCLNDTNVRQRLGLPEKK-DLVPAKDTH--- 582
            +PI    F +PQGSLVYW+TNSS++ IQQL +    VR +LGLP+K+     AK+ H   
Sbjct: 289  VPIFFTGFYIPQGSLVYWVTNSSLSAIQQLTIRHPTVRAKLGLPDKQAPNAAAKEMHTPG 348

Query: 583  ----------NLVAPVSFSDFS----------HKQRKVSIKSRSPDELVMLSVQLLAKGH 702
                        ++P S S              KQ ++ I+S SP +L+ LSVQ+L+KG 
Sbjct: 349  EGSLGPPTKQQYISPESVSPQELPGIKSMYPRRKQHQIPIESLSPRDLIALSVQILSKGD 408

Query: 703  XXXXXXXXXXXXXXDPEHTRALIIMGQTLFQDGVLEEAIDHLERAISKLFLLGYPAEVKE 882
                          DP + RAL++MGQTL Q   +EEA D+LERA++KLFL+G+P E  E
Sbjct: 409  KDGAIPFIRMALDKDPNYVRALVVMGQTLLQKEQVEEASDYLERAVTKLFLIGHPTE-DE 467

Query: 883  VDLLIVASQWAGSCYVQQGKYTEALIHFERLGHIKEPEESRSKSHYYDGLVMLASALSHE 1062
            VDL+I+ASQWAG+  V+QGK  E L+H ER+ ++KEP+E +SK+HY+DGL++LAS L  E
Sbjct: 468  VDLMILASQWAGAACVRQGKTAEGLVHLERIANLKEPDEPKSKAHYFDGLLLLASTLYRE 527

Query: 1063 DRKAEAVKYLRKAAEYNTSYKVYLEELENEEGNFASDLVNSRRGDY 1200
             R AEA K+LRKAA YN +YK YLEE E E+G F +DLV+SRRGDY
Sbjct: 528  GRNAEAAKHLRKAAAYNPAYKEYLEECEREDG-FVNDLVSSRRGDY 572


>ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
            gi|223548578|gb|EEF50069.1| cytochrome oxidase biogenesis
            protein, putative [Ricinus communis]
          Length = 548

 Score =  410 bits (1054), Expect = e-112
 Identities = 201/382 (52%), Positives = 267/382 (69%)
 Frame = +1

Query: 55   RSYRDQFMLFRNERRAVGCPSFLWLGAYISVQFPCFLLWMTTIRKMSLDNYTGFECGGAL 234
            +S+ DQ  LF  ERRA+GCPS+LW  AY+S Q PCFLLWMT+IR+MSLD++ GF+CGG L
Sbjct: 168  KSFVDQISLFHKERRALGCPSYLWFLAYVSAQVPCFLLWMTSIRRMSLDHHPGFDCGGTL 227

Query: 235  WFQNLTELPHGVSGSIFPLLIAGLHFASVQISFHTASAGKISGLLGFLVKGYKFYLNAMT 414
            WFQNLTE PHG++G IFPLLIA LH+ ++Q++F   S  K +GLL  L K YK YL+ +T
Sbjct: 228  WFQNLTEYPHGIAGPIFPLLIACLHYINIQLAFEKFSVQKTTGLLSLLAKYYKLYLDLLT 287

Query: 415  LPILCAAFCVPQGSLVYWLTNSSVTLIQQLCLNDTNVRQRLGLPEKKDLVPAKDTHNLVA 594
            LP+    +C+PQGSLVYW+TNSS+++IQQ+ L    VR +LGLP K     + D+  + +
Sbjct: 288  LPLFFIGYCIPQGSLVYWVTNSSLSVIQQMSLKHPAVRAKLGLPAKDAPAASADSEEMGS 347

Query: 595  PVSFSDFSHKQRKVSIKSRSPDELVMLSVQLLAKGHXXXXXXXXXXXXXXDPEHTRALII 774
            P +  D   K  KV +++ +P +L+ +SVQLL+  H              DP +  AL++
Sbjct: 348  PQASLDAPSKNGKVPVENLNPKQLLAISVQLLSNQHRERAIPLLQLALQKDPNYIGALVV 407

Query: 775  MGQTLFQDGVLEEAIDHLERAISKLFLLGYPAEVKEVDLLIVASQWAGSCYVQQGKYTEA 954
            MGQTL Q  +  EA DHLERAISKLFL G P EVK+VDLLI+ASQWAG   ++QG+  E 
Sbjct: 408  MGQTLLQKEMYAEARDHLERAISKLFLAGNPTEVKDVDLLILASQWAGVACIRQGENAEG 467

Query: 955  LIHFERLGHIKEPEESRSKSHYYDGLVMLASALSHEDRKAEAVKYLRKAAEYNTSYKVYL 1134
            + HFER+ +++EPE+ + K HY+D L+ LASAL +E RKAEA  YLR A  +N ++K  L
Sbjct: 468  VAHFERVANLEEPEDPKCKVHYFDTLIFLASALYNEGRKAEAANYLRLAVAFNPAFKELL 527

Query: 1135 EELENEEGNFASDLVNSRRGDY 1200
            E+ EN+E  F SDLVNSRR DY
Sbjct: 528  EQCENDE-EFGSDLVNSRRRDY 548


>ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Cucumis
            sativus]
          Length = 366

 Score =  384 bits (987), Expect = e-104
 Identities = 193/353 (54%), Positives = 245/353 (69%), Gaps = 1/353 (0%)
 Frame = +1

Query: 145  VQFPCFLLWMTTIRKMSLDNYTGFECGGALWFQNLTELPHGVSGSIFPLLIAGLHFASVQ 324
            +Q PCFLLWM TIRKMSLD+Y GF+ GGALWFQNLTE PHGV G IFP LIA LHF +VQ
Sbjct: 14   MQVPCFLLWMVTIRKMSLDHYPGFDYGGALWFQNLTEYPHGVFGPIFPFLIASLHFINVQ 73

Query: 325  ISFHTASAGKISGLLGFLVKGYKFYLNAMTLPILCAAFCVPQGSLVYWLTNSSVTLIQQL 504
            +SF  +S  K +G++G L K YK YLN +T+P+    +C+PQGSLVYW+TNSS T IQQL
Sbjct: 74   LSFRKSSLEKETGIIGILAKYYKLYLNLLTVPLFFIGYCIPQGSLVYWVTNSSFTAIQQL 133

Query: 505  CLNDTNVRQRLGLPEKKDLVPAKDTHNLVAPVSFS-DFSHKQRKVSIKSRSPDELVMLSV 681
             L    VR +LGLP +   V          P     + + K +K+S++  SP EL+ LSV
Sbjct: 134  TLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTTKWKKISVEKLSPKELLALSV 193

Query: 682  QLLAKGHXXXXXXXXXXXXXXDPEHTRALIIMGQTLFQDGVLEEAIDHLERAISKLFLLG 861
            QLL+KG               +PE+ RAL++MGQTL Q+    EA  +LERAISKLFL G
Sbjct: 194  QLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNAQPAEATVYLERAISKLFLSG 253

Query: 862  YPAEVKEVDLLIVASQWAGSCYVQQGKYTEALIHFERLGHIKEPEESRSKSHYYDGLVML 1041
            +P EV+ VDLLI+ASQWAG  +++QGK  E + H ER+ ++KEPEE +SK+HYYDGLV+L
Sbjct: 254  HPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYYDGLVLL 313

Query: 1042 ASALSHEDRKAEAVKYLRKAAEYNTSYKVYLEELENEEGNFASDLVNSRRGDY 1200
            ASAL +E RKAEA KYL+ A  YN +YK YL++ E++      DLV+SRRGDY
Sbjct: 314  ASALYNEGRKAEATKYLKSAVAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 366


>ref|XP_002313020.1| inner membrane protein [Populus trichocarpa]
            gi|222849428|gb|EEE86975.1| inner membrane protein
            [Populus trichocarpa]
          Length = 499

 Score =  350 bits (898), Expect = 5e-94
 Identities = 190/368 (51%), Positives = 240/368 (65%), Gaps = 6/368 (1%)
 Frame = +1

Query: 55   RSYRDQFMLFRNERRAVGCPSFLWLGAYISVQFPCFLLWMTTIRKMSLDNYTGFECGGAL 234
            RSY +Q  LFRNERRA+GCPS+LW  A++SVQ PCFLLWMT+IR+M LDN+ GF+CGGAL
Sbjct: 159  RSYIEQISLFRNERRAIGCPSYLWFLAFLSVQIPCFLLWMTSIRRMCLDNHPGFDCGGAL 218

Query: 235  WFQNLTELPHGVSGSIFPLLIAGLHFASVQISFHTASAGKISGLLGFLVKGYKFYLNAMT 414
            WFQNLTELPHGV G IFP LIAGLH                    G  V  Y+ YLN M 
Sbjct: 219  WFQNLTELPHGVLGPIFPFLIAGLH--------------------GVNVHYYRKYLNFMM 258

Query: 415  LPILCAAFCVPQGSLVYWLTNSSVTLIQQLCLNDTNVRQRLGLPEKKDLVPAKDTHNLVA 594
            LP+    +C+PQGSLVYW+TNSS+T IQQ+ L    VR +LGL + KD   A        
Sbjct: 259  LPLFFIGYCIPQGSLVYWVTNSSLTAIQQVSLKLPVVRAKLGLLD-KDFPKA-------P 310

Query: 595  PVSFSDFSHKQRKVSIKSRSPDEL------VMLSVQLLAKGHXXXXXXXXXXXXXXDPEH 756
             +S    +H+ RKVS ++ SP EL      V LSV+LL+ GH              D  H
Sbjct: 311  ALSAEMVAHELRKVSPENLSPHELLVVSGAVQLSVKLLSSGHRARAIPLLQMALEKDSGH 370

Query: 757  TRALIIMGQTLFQDGVLEEAIDHLERAISKLFLLGYPAEVKEVDLLIVASQWAGSCYVQQ 936
             +ALI+MGQ   Q+G+  EA DHLERAIS L L G+P   ++VD LI+ASQWAG   ++Q
Sbjct: 371  VKALIVMGQARLQEGLHAEATDHLERAISNLILTGHPT-AEDVDHLILASQWAGVACIRQ 429

Query: 937  GKYTEALIHFERLGHIKEPEESRSKSHYYDGLVMLASALSHEDRKAEAVKYLRKAAEYNT 1116
            GK  E ++H ER+  ++EPE+ +SK+HY+DGL++LASALS EDR AEAVKYLR    Y+ 
Sbjct: 430  GKNAEGIMHLERITSLEEPEDPKSKAHYFDGLLLLASALSKEDRNAEAVKYLRLVVAYDP 489

Query: 1117 SYKVYLEE 1140
            S K +L++
Sbjct: 490  SRKEFLDQ 497


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