BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014481
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326752.1| predicted protein [Populus trichocarpa] gi|2...   247   8e-64
ref|XP_003612704.1| Pentatricopeptide repeat-containing protein ...   243   9e-63
ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containi...   238   3e-61
emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]   236   2e-60
ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containi...   234   7e-60

>ref|XP_002326752.1| predicted protein [Populus trichocarpa] gi|222834074|gb|EEE72551.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  247 bits (630), Expect = 8e-64
 Identities = 115/163 (70%), Positives = 139/163 (85%)
 Frame = -3

Query: 489 NLMQMKSNKVSDYLVLSNMYAEAQRWEDVAVTRTKMAQTGLIQMPGFSSVEVDKKIYKFV 310
           +L ++ S+   DY+VLSNMYA A+RWEDVA  RT+MA+ G  Q PGFS V+V++KIYKFV
Sbjct: 381 SLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFV 440

Query: 309 SQDMSQPQCNGVHDMLHQMEWQLRFEGYSADTSQVLLDVDEEEKKERISRHSQKLAIAFA 130
           SQDMS PQC G+++M+HQMEWQL+FEGYS DTSQVL DVDEEEK++R+  HSQKLA+AFA
Sbjct: 441 SQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFA 500

Query: 129 LIHTSEGSPIRIVRNLKMCTDCHTYTKYISKIYERTITVRDRN 1
           LIHTS+G+PIRI RNL+MC DCHTYTK IS IY+R ITVRDRN
Sbjct: 501 LIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREITVRDRN 543


>ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514039|gb|AES95662.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 572

 Score =  243 bits (621), Expect = 9e-63
 Identities = 114/162 (70%), Positives = 135/162 (83%)
 Frame = -3

Query: 489 NLMQMKSNKVSDYLVLSNMYAEAQRWEDVAVTRTKMAQTGLIQMPGFSSVEVDKKIYKFV 310
           NL  +  N   DYLVL+NMYA+AQ+W+DVA  RTK+A+  L+Q PGFS +E  +K+YKFV
Sbjct: 394 NLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFV 453

Query: 309 SQDMSQPQCNGVHDMLHQMEWQLRFEGYSADTSQVLLDVDEEEKKERISRHSQKLAIAFA 130
           SQD S PQ N +++M+HQMEWQL+FEGY  DTSQVLLDVD+EEKKER+  HSQKLAIAF 
Sbjct: 454 SQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLDVDDEEKKERLKFHSQKLAIAFG 513

Query: 129 LIHTSEGSPIRIVRNLKMCTDCHTYTKYISKIYERTITVRDR 4
           LIHTSEGSP+RI RNL+MC+DCHTYTKYIS IYER ITVRDR
Sbjct: 514 LIHTSEGSPLRITRNLRMCSDCHTYTKYISMIYEREITVRDR 555


>ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera] gi|297742017|emb|CBI33804.3| unnamed
           protein product [Vitis vinifera]
          Length = 605

 Score =  238 bits (608), Expect = 3e-61
 Identities = 115/162 (70%), Positives = 136/162 (83%)
 Frame = -3

Query: 486 LMQMKSNKVSDYLVLSNMYAEAQRWEDVAVTRTKMAQTGLIQMPGFSSVEVDKKIYKFVS 307
           L ++ S K SDY+VLSNMYA+AQRWEDVA TRT M   GL Q PGFS VEV +K+++FVS
Sbjct: 428 LFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVS 487

Query: 306 QDMSQPQCNGVHDMLHQMEWQLRFEGYSADTSQVLLDVDEEEKKERISRHSQKLAIAFAL 127
           QD   PQ   V++ML+QMEWQL+FEGYS DT+QVL DVDEEEKK+R+S HSQKLAIA+AL
Sbjct: 488 QDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYAL 547

Query: 126 IHTSEGSPIRIVRNLKMCTDCHTYTKYISKIYERTITVRDRN 1
           IHTS+GSPIRIVRNL+MC DCHTYTK IS I++R ITVRDR+
Sbjct: 548 IHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITVRDRH 589


>emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
          Length = 562

 Score =  236 bits (601), Expect = 2e-60
 Identities = 113/162 (69%), Positives = 135/162 (83%)
 Frame = -3

Query: 486 LMQMKSNKVSDYLVLSNMYAEAQRWEDVAVTRTKMAQTGLIQMPGFSSVEVDKKIYKFVS 307
           L ++ S K SDY+VLSNMYA+AQRWEDVA TRT M   GL Q PGFS VEV +K+++FVS
Sbjct: 385 LFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVS 444

Query: 306 QDMSQPQCNGVHDMLHQMEWQLRFEGYSADTSQVLLDVDEEEKKERISRHSQKLAIAFAL 127
           QD   PQ   V++ML+QMEWQL+FEGY  DT+QVL DVDEEEKK+R+S HSQKLAIA+AL
Sbjct: 445 QDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYAL 504

Query: 126 IHTSEGSPIRIVRNLKMCTDCHTYTKYISKIYERTITVRDRN 1
           IHTS+GSP+RIVRNL+MC DCHTYTK IS I++R ITVRDR+
Sbjct: 505 IHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITVRDRH 546


>ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Cucumis sativus]
           gi|449508034|ref|XP_004163198.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g31920-like [Cucumis sativus]
          Length = 606

 Score =  234 bits (596), Expect = 7e-60
 Identities = 113/163 (69%), Positives = 131/163 (80%)
 Frame = -3

Query: 489 NLMQMKSNKVSDYLVLSNMYAEAQRWEDVAVTRTKMAQTGLIQMPGFSSVEVDKKIYKFV 310
           NL ++ S+  SDYLVLSNMYA AQ+WE+ A  RTKM   GLIQ PG+S VEV  K+YKFV
Sbjct: 428 NLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFV 487

Query: 309 SQDMSQPQCNGVHDMLHQMEWQLRFEGYSADTSQVLLDVDEEEKKERISRHSQKLAIAFA 130
           SQD S  +   ++ M+HQMEWQLRFEGY  DTSQV+LDVDEEEK ER+  HSQKLAIAFA
Sbjct: 488 SQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQKLAIAFA 547

Query: 129 LIHTSEGSPIRIVRNLKMCTDCHTYTKYISKIYERTITVRDRN 1
           LIHTS+GS IRI+RNL+MC DCH+YTK +S IYER ITVRDRN
Sbjct: 548 LIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIYEREITVRDRN 590