BLASTX nr result

ID: Bupleurum21_contig00014411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014411
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              399   e-109
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   364   2e-98
ref|XP_004146849.1| PREDICTED: transcription factor tau subunit ...   360   3e-97
ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|2...   339   8e-91
ref|XP_003540640.1| PREDICTED: general transcription factor 3C p...   330   4e-88

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  399 bits (1026), Expect = e-109
 Identities = 214/401 (53%), Positives = 271/401 (67%), Gaps = 46/401 (11%)
 Frame = +3

Query: 39   VSPEVARKLGDATLHYANERYDEAICLLKEVIRLDPYLPDPYHTLGLVYNAIGDKKKQIG 218
            +SPEV RKLG+A LHYA+ RY+EAI +LKEV+RL P LPD YHT GLVYNA GDKK+ + 
Sbjct: 89   LSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKRALN 148

Query: 219  CYMLAAHSSPKDGSLWKHLVTWSIEEGNNEQAMYCLSKAITAEPEDISLRFHRASLYVEL 398
             YMLAAH +PKD SLWK LVTWSIE+GN  QA YCLSKAITA+PEDISLRFHRASLYVEL
Sbjct: 149  FYMLAAHLTPKDSSLWKLLVTWSIEQGNTGQARYCLSKAITADPEDISLRFHRASLYVEL 208

Query: 399  GHYQKAAESYEQISQLRPELVEALKTAATLYQKCCQRERAVSILEEYVKRNKNEADMSVV 578
            G YQKAAESYEQISQL PE VEA KT A LY+KC Q ER+VSILE+Y+K +  +AD+S+V
Sbjct: 209  GEYQKAAESYEQISQLFPENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADLSIV 268

Query: 579  HLLVSIHIEGNEYLKALNHIEHAKQVYGACKELPLSLNIKAGVCEVHMGNLEKAEAIFSV 758
             +L ++ +E N + +AL HIEHA+ +Y + K+LPL L IKAG+C +H+GN+EKAEA+FSV
Sbjct: 269  DMLAAVCMENNVHDRALQHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKAEALFSV 328

Query: 759  LQSGNACDDPHIIAEVADSLAYRKHFELALKYYMMLEAKDYDVSGVQYSSMAQCYLFLGD 938
            LQ    CD   +I+EVADS    + ++ ALKYY+MLE      +G  +  +AQCYL L +
Sbjct: 329  LQR-ETCDHAGLISEVADSFMSLELYDFALKYYLMLEGNVGRDNGFLHLKIAQCYLSLKE 387

Query: 939  RLRSIECYYK----------------------------------------------ALPK 980
            R+++I  +YK                                               L  
Sbjct: 388  RVQAIPFFYKENQEADRLAKRGASIPIKCSEDFFFSLGSPCKLMIVILFLVSIFFYTLDV 447

Query: 981  LNDGVDVRLNLASLLVQESRDNEAISLLCPPTNPECTNEQN 1103
            L D +D RL LA+LL++ ++++EAI LL PP N E T + N
Sbjct: 448  LQDNIDARLTLATLLLEGAKEDEAILLLSPPKNLESTVDPN 488


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Vitis vinifera]
          Length = 1110

 Score =  364 bits (934), Expect = 2e-98
 Identities = 182/277 (65%), Positives = 222/277 (80%)
 Frame = +3

Query: 39  VSPEVARKLGDATLHYANERYDEAICLLKEVIRLDPYLPDPYHTLGLVYNAIGDKKKQIG 218
           +SPEV RKLG+A LHYA+ RY+EAI +LKEV+RL P LPD YHT GLVYNA GDKK+ + 
Sbjct: 129 LSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKRALN 188

Query: 219 CYMLAAHSSPKDGSLWKHLVTWSIEEGNNEQAMYCLSKAITAEPEDISLRFHRASLYVEL 398
            YMLAAH +PKD SLWK LVTWSIE+GN  QA YCLSKAITA+PEDISLRFHRASLYVEL
Sbjct: 189 FYMLAAHLTPKDSSLWKLLVTWSIEQGNTGQARYCLSKAITADPEDISLRFHRASLYVEL 248

Query: 399 GHYQKAAESYEQISQLRPELVEALKTAATLYQKCCQRERAVSILEEYVKRNKNEADMSVV 578
           G YQKAAESYEQISQL PE VEA KT A LY+KC Q ER+VSILE+Y+K +  +AD+S+V
Sbjct: 249 GEYQKAAESYEQISQLFPENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADLSIV 308

Query: 579 HLLVSIHIEGNEYLKALNHIEHAKQVYGACKELPLSLNIKAGVCEVHMGNLEKAEAIFSV 758
            +L ++ +E N + +AL HIEHA+ +Y + K+LPL L IKAG+C +H+GN+EKAEA+FSV
Sbjct: 309 DMLAAVCMENNVHDRALQHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKAEALFSV 368

Query: 759 LQSGNACDDPHIIAEVADSLAYRKHFELALKYYMMLE 869
           LQ    CD   +I+EVADS    + ++ ALKYY+MLE
Sbjct: 369 LQR-ETCDHAGLISEVADSFMSLELYDFALKYYLMLE 404



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 34/78 (43%), Positives = 50/78 (64%)
 Frame = +3

Query: 846  LKYYMMLEAKDYDVSGVQYSSMAQCYLFLGDRLRSIECYYKALPKLNDGVDVRLNLASLL 1025
            LKY  +L        G  +  +AQCYL L +R+++I  +YKAL  L D +D RL LA+LL
Sbjct: 621  LKYSFILSLWS---EGFLHLKIAQCYLSLKERVQAIPFFYKALDVLQDNIDARLTLATLL 677

Query: 1026 VQESRDNEAISLLCPPTN 1079
            ++ ++++EAI LL PP N
Sbjct: 678  LEGAKEDEAILLLSPPKN 695


>ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis
            sativus]
          Length = 927

 Score =  360 bits (925), Expect = 3e-97
 Identities = 189/355 (53%), Positives = 249/355 (70%), Gaps = 2/355 (0%)
 Frame = +3

Query: 48   EVARKLGDATLHYANERYDEAICLLKEVIRLDPYLPDPYHTLGLVYNAIGDKKKQIGCYM 227
            +V + LGDATL YA   +++AI LL++V+   P LPD YHTLGLVYNAIGD  K +G YM
Sbjct: 156  DVTKLLGDATLCYAQGEHEKAISLLRQVVLRAPDLPDSYHTLGLVYNAIGDDVKAMGFYM 215

Query: 228  LAAHSSPKDGSLWKHLVTWSIEEGNNEQAMYCLSKAITAEPEDISLRFHRASLYVELGHY 407
            LAAH  PKD SLWK L +WSI+ G+ +QA YCLSKAI AEP+DI+L FHRASLY+E G  
Sbjct: 216  LAAHLMPKDSSLWKLLFSWSIDRGDIDQASYCLSKAIKAEPDDINLLFHRASLYLERGDC 275

Query: 408  QKAAESYEQISQLRPELVEALKTAATLYQKCCQRERAVSILEEYVKRNKNEADMSVVHLL 587
            +KAAE+Y+QI Q     VEAL T A LYQKC   ERA+ ILE+Y+K + +EAD+ VV LL
Sbjct: 276  EKAAETYDQIHQQCLGNVEALMTGAKLYQKCGHLERAICILEDYIKGHPSEADLDVVDLL 335

Query: 588  VSIHIEGNEYLKALNHIEHAKQVYGACKELPLSLNIKAGVCEVHMGNLEKAEAIFSVLQS 767
             S+++   E+ KAL  IEHA +VY A  ELPL+L  KAG+C  H+G+LEKAE +F+ L+ 
Sbjct: 336  ASLYMGSKEFSKALERIEHADRVYCAGNELPLNLTTKAGICHAHLGDLEKAECLFANLRR 395

Query: 768  GNACDDPHIIAEVADSLAYRKHFELALKYYMMLEAKDYDVSGVQYSSMAQCYLFLGDRLR 947
                D  +++ EVADSL   KH+  ALKYY+M E    +V+G+ Y  +A+CYL   +R +
Sbjct: 396  ETTYDHSNLMIEVADSLMSLKHYSWALKYYLMSE----EVNGILYLKIAECYLSTNEREQ 451

Query: 948  SIECYYKALPKLNDGVDVRLNLASLLVQESRDNEAISLLCPP--TNPECTNEQNL 1106
            +I  +YK L  + D ++ RL LASLL++E+RD EAISLL PP  +NP  ++   L
Sbjct: 452  AIVFFYKVLQHVEDNINARLTLASLLLEEARDKEAISLLSPPKDSNPTSSSSSKL 506


>ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|222872248|gb|EEF09379.1|
            predicted protein [Populus trichocarpa]
          Length = 686

 Score =  339 bits (869), Expect = 8e-91
 Identities = 176/346 (50%), Positives = 241/346 (69%), Gaps = 1/346 (0%)
 Frame = +3

Query: 39   VSPEVARKLGDATLHYANERYDEAICLLKEVIRLDPYLPDPYHTLGLVYNAIGDKKKQIG 218
            +SPE+ R LGDATLHYA+  Y+EA+ +L EV++  P + D YHTLGLV+ A+G+ +K + 
Sbjct: 139  LSPEITRMLGDATLHYAHGNYEEALTVLSEVVKRAPLVADSYHTLGLVHKALGNTEKAMK 198

Query: 219  CYMLAAHSSPKDGSLWKHLVTWSIEEGNNEQAMYCLSKAITAEPEDISLRFHRASLYVEL 398
             Y +AA   PKD SLWK L +W +E+G+  +A  CLSKAI+A+P+DISLR   A  Y EL
Sbjct: 199  FYRIAAFLRPKDSSLWKLLFSWHVEQGDIARAWKCLSKAISADPDDISLRSLHALFYDEL 258

Query: 399  GHYQKAAESYEQISQLRPELVEALKTAATLYQKCCQRERAVSILEEYVKRNKNEADMSVV 578
            G +Q+AAESYEQI ++ PE VEA+KTAA ++  C Q +R V ILE+Y+K + +EAD+SV+
Sbjct: 259  GDHQRAAESYEQIVRICPEDVEAIKTAAKMHLNCGQIKRCVGILEDYLKGHPSEADLSVI 318

Query: 579  HLLVSIHIEGNEYLKALNHIEHAKQVYGACKELPLSLNIKAGVCEVHMGNLEKAEAIFSV 758
             LL  + +E + +  AL HIEHA+ +Y + KELPL L IKAG+C V +GN+EKAE  FS 
Sbjct: 319  ILLADVFMEIDAHNNALQHIEHAQMIYYSGKELPLELMIKAGICHVFLGNIEKAEIHFSA 378

Query: 759  LQSGNACDDPHIIAEVADSLAYRKHFELALKYYMMLEAK-DYDVSGVQYSSMAQCYLFLG 935
            LQ  N    P  I +VAD+    + F  ALKYY MLE     D  G  +  +AQCYL L 
Sbjct: 379  LQQENFSIHPEFITKVADAFMSTECFHSALKYYHMLELNVGADNEGEIHVKIAQCYLSLN 438

Query: 936  DRLRSIECYYKALPKLNDGVDVRLNLASLLVQESRDNEAISLLCPP 1073
            DR ++I  +YKALP L D +D R+ LASL++++++++EAISLL PP
Sbjct: 439  DRAKAIMFFYKALPMLKDSIDARVALASLILEDAKEDEAISLLSPP 484


>ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 919

 Score =  330 bits (846), Expect = 4e-88
 Identities = 173/355 (48%), Positives = 243/355 (68%), Gaps = 6/355 (1%)
 Frame = +3

Query: 39   VSPEVARKLGDATLHYANERYDEAICLLKEVIRLDPYLPDPYHTLGLVYNAIGDKKKQIG 218
            V P++ +  GDAT HYA   YD A  +L EVIRL P L + YHTLGLVY ++ D K+ + 
Sbjct: 142  VDPKLTQMQGDATFHYACGDYDRAKAVLCEVIRLAPNLHESYHTLGLVYTSLQDYKRAMA 201

Query: 219  CYMLAAHSSPKDGSLWKHLVTWSI------EEGNNEQAMYCLSKAITAEPEDISLRFHRA 380
             Y++AAH  PK+  LWK + TWSI      E+G  +QA YCL KAI A+P+D++LRFH A
Sbjct: 202  LYLIAAHLDPKESPLWKTIFTWSITFFKCREQGYVDQAGYCLLKAIKADPKDVTLRFHLA 261

Query: 381  SLYVELGHYQKAAESYEQISQLRPELVEALKTAATLYQKCCQRERAVSILEEYVKRNKNE 560
             LY ELGHYQKAA +YEQ+ +L  E ++ALK AA  Y+KC Q E ++ ILE+Y+K   + 
Sbjct: 262  RLYAELGHYQKAAVTYEQVHKLCCENIDALKAAAKFYKKCGQVEYSIQILEDYIKSQPDG 321

Query: 561  ADMSVVHLLVSIHIEGNEYLKALNHIEHAKQVYGACKELPLSLNIKAGVCEVHMGNLEKA 740
            A++SVV LL ++ +E   + +AL HIEHA+ V  A KELPL+L IKAG+C  H+GN+E+A
Sbjct: 322  ANVSVVDLLGTVLMETKAHDRALQHIEHAQTV-NARKELPLNLKIKAGICHAHLGNMERA 380

Query: 741  EAIFSVLQSGNACDDPHIIAEVADSLAYRKHFELALKYYMMLEAKDYDVSGVQYSSMAQC 920
            +A+F+ L+  NA     ++ +VADSL   +H+  AL YY+MLE      +G+ Y  +A+C
Sbjct: 381  QALFNDLKPENASKHIDLVTKVADSLMGLEHYNPALNYYLMLEGNIEKENGLLYLKIARC 440

Query: 921  YLFLGDRLRSIECYYKALPKLNDGVDVRLNLASLLVQESRDNEAISLLCPPTNPE 1085
            Y+ L +R ++I  Y KAL  L D VD R+ LASLL++E++++EAISLL PP + +
Sbjct: 441  YMSLKERSQAILFYSKALETLQDDVDARITLASLLLEEAKEDEAISLLSPPKDSD 495


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