BLASTX nr result

ID: Bupleurum21_contig00014370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014370
         (1300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878388.1| hypothetical protein ARALYDRAFT_486638 [Arab...   536   e-150
ref|NP_191712.1| Phosphoenolpyruvate carboxylase family protein ...   530   e-148
ref|XP_002276965.1| PREDICTED: 3-methyl-2-oxobutanoate hydroxyme...   525   e-146
ref|NP_182135.1| ketopantoate hydroxymethyltransferase 1 [Arabid...   521   e-145
ref|XP_002320828.1| ketopantoate hydroxymethyltransferase [Popul...   521   e-145

>ref|XP_002878388.1| hypothetical protein ARALYDRAFT_486638 [Arabidopsis lyrata subsp.
            lyrata] gi|297324226|gb|EFH54647.1| hypothetical protein
            ARALYDRAFT_486638 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score =  536 bits (1381), Expect = e-150
 Identities = 273/348 (78%), Positives = 299/348 (85%), Gaps = 2/348 (0%)
 Frame = +3

Query: 33   MASFLSLKPHRLRNLLTTAVRTLSNIPENTVYGGPKS--PNQRVTLTQLRQKHRRNEPIT 206
            MA+ L     R    +TT VR +SN+PENTVYGGPKS  PNQRVTLTQLRQKHR+ EPIT
Sbjct: 1    MAASLVRSCSRASRAITT-VRFMSNVPENTVYGGPKSQNPNQRVTLTQLRQKHRKGEPIT 59

Query: 207  MVTAYDYPSAVHLDTAGIDIALVGDSAAMVVHGHDTTLPITVDEMLVHCRAVARGAKSPL 386
            MVTAYDYPSAVH+DTAGID+ LVGDSAAMVVHG+DTTLPI++DEMLVHCRAVARGAK PL
Sbjct: 60   MVTAYDYPSAVHIDTAGIDVCLVGDSAAMVVHGYDTTLPISLDEMLVHCRAVARGAKRPL 119

Query: 387  LVGDLPFGSYESSTQQAVDTAVRVLKEGEMDAIKLEGGAPSRITAAKSIVDAGIAVMGHV 566
            LVGDLPFG+YESST QAVDTAVRVLKEG MDAIKLEGG+PSRITAAKSIV+AGIAVMGHV
Sbjct: 120  LVGDLPFGTYESSTNQAVDTAVRVLKEGGMDAIKLEGGSPSRITAAKSIVEAGIAVMGHV 179

Query: 567  GLTPQAISVLGGFKPQGRNIVSAVKVVETAILLQEAGCFSVVLECXXXXXXXXXTSALNI 746
            GLTPQAISVLGGF+PQG+NI SAVKVVETA+ LQEAGCFSVVLEC         TSALNI
Sbjct: 180  GLTPQAISVLGGFRPQGKNIASAVKVVETAMALQEAGCFSVVLECVPPPVAAAATSALNI 239

Query: 747  FTIGIGAGPYCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQYGQVGDVINKALIEYKDEVT 926
             TIGIGAGP+CSGQVLVYHDLLGMMQHPHHAKVTPKFCKQY QVG+VINKAL+EYK+EV+
Sbjct: 240  PTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQYAQVGEVINKALLEYKEEVS 299

Query: 927  KGTFPGPAHSPYKISGDDVEGFLKELQKLGLDQXXXXXXXXXXKMELS 1070
            K  FPGP+HSPYKI+  D++GFL ELQ LGLD+          KME S
Sbjct: 300  KHLFPGPSHSPYKIASSDLDGFLSELQNLGLDKAASAAAASAEKMEPS 347


>ref|NP_191712.1| Phosphoenolpyruvate carboxylase family protein [Arabidopsis thaliana]
            gi|42572757|ref|NP_974474.1| Phosphoenolpyruvate
            carboxylase family protein [Arabidopsis thaliana]
            gi|6850844|emb|CAB71083.1| 3-methyl-2-oxobutanoate
            hydroxy-methyl-transferase-like protein [Arabidopsis
            thaliana] gi|21593121|gb|AAM65070.1|
            3-methyl-2-oxobutanoate hydroxy-methyl-transferase-like
            protein [Arabidopsis thaliana] gi|94442441|gb|ABF19008.1|
            At3g61530 [Arabidopsis thaliana]
            gi|332646697|gb|AEE80218.1| Phosphoenolpyruvate
            carboxylase family protein [Arabidopsis thaliana]
            gi|332646698|gb|AEE80219.1| Phosphoenolpyruvate
            carboxylase family protein [Arabidopsis thaliana]
          Length = 354

 Score =  530 bits (1365), Expect = e-148
 Identities = 265/331 (80%), Positives = 292/331 (88%), Gaps = 2/331 (0%)
 Frame = +3

Query: 84   TAVRTLSNIPENTVYGGPK--SPNQRVTLTQLRQKHRRNEPITMVTAYDYPSAVHLDTAG 257
            T VR +SN+PE+TVYGGPK  + NQRVTLTQLRQKHR+ EPITMVTAYDYPSAVH+DTAG
Sbjct: 18   TTVRFMSNVPEDTVYGGPKPQNSNQRVTLTQLRQKHRKGEPITMVTAYDYPSAVHIDTAG 77

Query: 258  IDIALVGDSAAMVVHGHDTTLPITVDEMLVHCRAVARGAKSPLLVGDLPFGSYESSTQQA 437
            ID+ LVGDSAAMVVHG+DTTLPI+++EMLVHCRAVARGAK PLLVGDLPFG+YESST QA
Sbjct: 78   IDVCLVGDSAAMVVHGYDTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQA 137

Query: 438  VDTAVRVLKEGEMDAIKLEGGAPSRITAAKSIVDAGIAVMGHVGLTPQAISVLGGFKPQG 617
            VDTAVRVLKEG MDAIKLEGG+PSRITAAKSIV+AGIAVMGHVGLTPQAISVLGGF+PQG
Sbjct: 138  VDTAVRVLKEGGMDAIKLEGGSPSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRPQG 197

Query: 618  RNIVSAVKVVETAILLQEAGCFSVVLECXXXXXXXXXTSALNIFTIGIGAGPYCSGQVLV 797
            +NI SAVKVVETA+ LQEAGCFSVVLEC         TSALNI TIGIGAGP+CSGQVLV
Sbjct: 198  KNIASAVKVVETAMALQEAGCFSVVLECVPPPVAAAATSALNIPTIGIGAGPFCSGQVLV 257

Query: 798  YHDLLGMMQHPHHAKVTPKFCKQYGQVGDVINKALIEYKDEVTKGTFPGPAHSPYKISGD 977
            YHDLLGMMQHPHHAKVTPKFCKQY QVG+VINKAL+EYK+EV+K  FPGP+HSPYKIS  
Sbjct: 258  YHDLLGMMQHPHHAKVTPKFCKQYAQVGEVINKALLEYKEEVSKHLFPGPSHSPYKISSS 317

Query: 978  DVEGFLKELQKLGLDQXXXXXXXXXXKMELS 1070
            D++GFL ELQKLGLD+          KM+ S
Sbjct: 318  DLDGFLSELQKLGLDKAASDAAASAEKMDHS 348


>ref|XP_002276965.1| PREDICTED: 3-methyl-2-oxobutanoate hydroxymethyltransferase [Vitis
            vinifera]
          Length = 363

 Score =  525 bits (1352), Expect = e-146
 Identities = 262/334 (78%), Positives = 290/334 (86%), Gaps = 2/334 (0%)
 Frame = +3

Query: 78   LTTAVRTLSNIPENTVYGGPK--SPNQRVTLTQLRQKHRRNEPITMVTAYDYPSAVHLDT 251
            L T ++ LSN+PENTVYGGPK  +PNQRVTL  LRQKHRR EP TMVTAYDYPSAVHLD 
Sbjct: 20   LHTHLKWLSNLPENTVYGGPKPQNPNQRVTLNHLRQKHRRGEPFTMVTAYDYPSAVHLDL 79

Query: 252  AGIDIALVGDSAAMVVHGHDTTLPITVDEMLVHCRAVARGAKSPLLVGDLPFGSYESSTQ 431
            AGIDI LVGDSA+MVVHGHDTTLPI+++EMLVHCRAVARGAK PLLVGDLPFG+YESS+ 
Sbjct: 80   AGIDICLVGDSASMVVHGHDTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSSN 139

Query: 432  QAVDTAVRVLKEGEMDAIKLEGGAPSRITAAKSIVDAGIAVMGHVGLTPQAISVLGGFKP 611
            QAVD AVR+LKEG MDAIKLEGG+PSRITAAKSIV+AGIAVMGHVGLTPQAISVLGGF+P
Sbjct: 140  QAVDAAVRILKEGTMDAIKLEGGSPSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRP 199

Query: 612  QGRNIVSAVKVVETAILLQEAGCFSVVLECXXXXXXXXXTSALNIFTIGIGAGPYCSGQV 791
            QG+NI SAVKVVETA+ LQEAGCF+VVLEC         TSAL I TIGIGAGP+CSGQV
Sbjct: 200  QGKNIASAVKVVETAMALQEAGCFAVVLECVPAPVAAATTSALRIPTIGIGAGPFCSGQV 259

Query: 792  LVYHDLLGMMQHPHHAKVTPKFCKQYGQVGDVINKALIEYKDEVTKGTFPGPAHSPYKIS 971
            LVYHDLLGMMQHPHHAKVTPKFCK+YGQVG+VINKAL+EYK+EVT G+FPGPAHSPYKI 
Sbjct: 260  LVYHDLLGMMQHPHHAKVTPKFCKRYGQVGEVINKALLEYKEEVTNGSFPGPAHSPYKIC 319

Query: 972  GDDVEGFLKELQKLGLDQXXXXXXXXXXKMELSK 1073
              +V+GFL ELQKLGLD+          K+E S+
Sbjct: 320  SAEVDGFLNELQKLGLDKAASAAAEAAEKIETSE 353


>ref|NP_182135.1| ketopantoate hydroxymethyltransferase 1 [Arabidopsis thaliana]
            gi|3702336|gb|AAC62893.1| 3-methyl-2-oxobutanoate
            hydroxy-methyl-transferase [Arabidopsis thaliana]
            gi|28466955|gb|AAO44086.1| At2g46110 [Arabidopsis
            thaliana] gi|110735692|dbj|BAE99826.1|
            3-methyl-2-oxobutanoate hydroxy-methyl-transferase
            [Arabidopsis thaliana] gi|330255551|gb|AEC10645.1|
            ketopantoate hydroxymethyltransferase 1 [Arabidopsis
            thaliana]
          Length = 347

 Score =  521 bits (1342), Expect = e-145
 Identities = 265/349 (75%), Positives = 295/349 (84%), Gaps = 2/349 (0%)
 Frame = +3

Query: 33   MASFLSLKPHRLRNLLTTAVRTLSNIPENTVYGGPK--SPNQRVTLTQLRQKHRRNEPIT 206
            MAS L+    R    ++  VR +SN+PENTVYGGPK  +PNQRVTLT LRQKHRR EPIT
Sbjct: 1    MASSLTRNCSRFSKAIS--VRFMSNLPENTVYGGPKPQNPNQRVTLTHLRQKHRRGEPIT 58

Query: 207  MVTAYDYPSAVHLDTAGIDIALVGDSAAMVVHGHDTTLPITVDEMLVHCRAVARGAKSPL 386
            +VTAYDYPSAVHLDTAGID+ LVGDSA+MVVHGHDTTLPI++DEMLVHCRAVARGAK PL
Sbjct: 59   VVTAYDYPSAVHLDTAGIDVCLVGDSASMVVHGHDTTLPISLDEMLVHCRAVARGAKRPL 118

Query: 387  LVGDLPFGSYESSTQQAVDTAVRVLKEGEMDAIKLEGGAPSRITAAKSIVDAGIAVMGHV 566
            LVGDLPFG+YESS+ QAVDTAVRVLKEG MDAIKLEGG+ SRITAAK+IV+AGIAV+GHV
Sbjct: 119  LVGDLPFGTYESSSSQAVDTAVRVLKEGGMDAIKLEGGSASRITAAKAIVEAGIAVIGHV 178

Query: 567  GLTPQAISVLGGFKPQGRNIVSAVKVVETAILLQEAGCFSVVLECXXXXXXXXXTSALNI 746
            GLTPQAISVLGGF+PQGRNI SAVKVVETA+ LQEAGCFSVVLEC         TSAL I
Sbjct: 179  GLTPQAISVLGGFRPQGRNIASAVKVVETAMALQEAGCFSVVLECVPPPVAAAATSALKI 238

Query: 747  FTIGIGAGPYCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQYGQVGDVINKALIEYKDEVT 926
             TIGIGAGP+CSGQVLVYHDLLGMMQHPHHAKVTPKFCKQY  VG+VINKAL+EYK+EV+
Sbjct: 239  PTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQYANVGEVINKALMEYKEEVS 298

Query: 927  KGTFPGPAHSPYKISGDDVEGFLKELQKLGLDQXXXXXXXXXXKMELSK 1073
            K  FPGP+HSPYKI+  +++GFL ELQKLG D+           ME SK
Sbjct: 299  KKVFPGPSHSPYKITASELDGFLTELQKLGFDKAASAAALAAENMEPSK 347


>ref|XP_002320828.1| ketopantoate hydroxymethyltransferase [Populus trichocarpa]
            gi|222861601|gb|EEE99143.1| ketopantoate
            hydroxymethyltransferase [Populus trichocarpa]
          Length = 360

 Score =  521 bits (1342), Expect = e-145
 Identities = 260/343 (75%), Positives = 294/343 (85%), Gaps = 2/343 (0%)
 Frame = +3

Query: 48   SLKPHRLRNLLTTAVRTLSNIPENTVYGGPK--SPNQRVTLTQLRQKHRRNEPITMVTAY 221
            +LKP  L   L    R +SN+PENTVYGGPK  +P+QRVTLT L+QKH++ +PIT+VTAY
Sbjct: 13   TLKPTTLLRHL----RFMSNVPENTVYGGPKPQNPHQRVTLTHLKQKHKKGDPITVVTAY 68

Query: 222  DYPSAVHLDTAGIDIALVGDSAAMVVHGHDTTLPITVDEMLVHCRAVARGAKSPLLVGDL 401
            DYPSAVHLDTAGID+ LVGDSA+MVVHGHDTTLPI++DEMLVHCRAVARGAK PLLVGDL
Sbjct: 69   DYPSAVHLDTAGIDVCLVGDSASMVVHGHDTTLPISLDEMLVHCRAVARGAKRPLLVGDL 128

Query: 402  PFGSYESSTQQAVDTAVRVLKEGEMDAIKLEGGAPSRITAAKSIVDAGIAVMGHVGLTPQ 581
            PFG+YESS+ QAVDTAVR+LKEG MDAIKLEGG+PSRITAAK+IV+AGIAVMGHVGLTPQ
Sbjct: 129  PFGTYESSSNQAVDTAVRILKEGGMDAIKLEGGSPSRITAAKAIVEAGIAVMGHVGLTPQ 188

Query: 582  AISVLGGFKPQGRNIVSAVKVVETAILLQEAGCFSVVLECXXXXXXXXXTSALNIFTIGI 761
            AISVLGGF+PQG+NI SAVKVVETA+ LQEAGCFSVVLEC         TSAL I TIGI
Sbjct: 189  AISVLGGFRPQGKNIASAVKVVETALALQEAGCFSVVLECVPAPVAAAATSALKIPTIGI 248

Query: 762  GAGPYCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQYGQVGDVINKALIEYKDEVTKGTFP 941
            GAGP+CSGQVLVYHDLLGMMQHPHHAKVTPKFCKQY  VGDVINKAL+EYK+EV  G+FP
Sbjct: 249  GAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQYAHVGDVINKALVEYKEEVANGSFP 308

Query: 942  GPAHSPYKISGDDVEGFLKELQKLGLDQXXXXXXXXXXKMELS 1070
            GPAHSPYKIS  ++ GF+ ELQKLGLD+          K+++S
Sbjct: 309  GPAHSPYKISETEINGFMSELQKLGLDKAAASTAAAAEKIKMS 351


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