BLASTX nr result

ID: Bupleurum21_contig00014182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014182
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524920.1| PREDICTED: putative acyl-CoA synthetase YngI...   239   7e-61
ref|XP_002298670.1| predicted protein [Populus trichocarpa] gi|2...   235   9e-60
ref|XP_002328916.1| predicted protein [Populus trichocarpa] gi|2...   234   1e-59
ref|XP_003537522.1| PREDICTED: long-chain-fatty-acid--CoA ligase...   233   5e-59
ref|XP_002885598.1| hypothetical protein ARALYDRAFT_898924 [Arab...   232   6e-59

>ref|XP_003524920.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
          Length = 733

 Score =  239 bits (609), Expect = 7e-61
 Identities = 124/196 (63%), Positives = 147/196 (75%), Gaps = 1/196 (0%)
 Frame = +3

Query: 207 SPLSFVSKSCDNRRYAVHFFISGGTIQINPLGNCKRSGGYAVSRPKFRVSCEIQAEEIQL 386
           SP +F   +   R+Y V     GG    +PL +             FRV C+ + E +++
Sbjct: 26  SPCNFSRITFSRRKYGV-----GGPAPSSPLSH-------------FRVFCQSKTEILEI 67

Query: 387 RRCSPFLESALL-SQDNVLSSEWKAIPDIWRSSAQKYGDRVALEDPYHNPPTTMTYKQLE 563
           R+CSPFLES+LL     V S EWKA+PDIWRSSA+KYG+ VAL DPYH+PPTTMTY QLE
Sbjct: 68  RKCSPFLESSLLLGNGGVASDEWKAVPDIWRSSAEKYGNNVALVDPYHDPPTTMTYTQLE 127

Query: 564 EEILDFSEGLRVIGLNPYEKLALFADNSCRWLVADQGIMATGAINVVRGSRSSVDELLQI 743
           + ILDF+EGLRVIG+ P EKLALFADNSCRWLVADQG+MA+GAINVVRGSRSSV+ELLQI
Sbjct: 128 QAILDFAEGLRVIGVRPDEKLALFADNSCRWLVADQGMMASGAINVVRGSRSSVEELLQI 187

Query: 744 YNHSESVALTVDNPEL 791
           YNHSESVAL VDNPE+
Sbjct: 188 YNHSESVALVVDNPEM 203


>ref|XP_002298670.1| predicted protein [Populus trichocarpa] gi|222845928|gb|EEE83475.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score =  235 bits (599), Expect = 9e-60
 Identities = 119/162 (73%), Positives = 144/162 (88%), Gaps = 1/162 (0%)
 Frame = +3

Query: 309 KRSGGYAVSRPKFRVSCEIQAEEIQLRRCSPFLESALLSQDNVLSSE-WKAIPDIWRSSA 485
           +R+ G++  R  FRVSCE   +EI++RRCSP LESAL+S++  L+S+ W+A+PDIWRSSA
Sbjct: 6   QRNYGFSARRG-FRVSCE--TKEIKIRRCSPNLESALVSRNGALTSDDWRAVPDIWRSSA 62

Query: 486 QKYGDRVALEDPYHNPPTTMTYKQLEEEILDFSEGLRVIGLNPYEKLALFADNSCRWLVA 665
           +KYGD+VA+ DP+H+PPT+MTYKQLEEEILDFSEGLRVIG+ P EKLALFADNS RWLVA
Sbjct: 63  EKYGDQVAVVDPHHDPPTSMTYKQLEEEILDFSEGLRVIGVKPDEKLALFADNSYRWLVA 122

Query: 666 DQGIMATGAINVVRGSRSSVDELLQIYNHSESVALTVDNPEL 791
           DQG+MA GA++VVRGSRSSV+ELLQIYNHSESVAL VDNPEL
Sbjct: 123 DQGMMAMGAVDVVRGSRSSVEELLQIYNHSESVALAVDNPEL 164


>ref|XP_002328916.1| predicted protein [Populus trichocarpa] gi|222839346|gb|EEE77683.1|
           predicted protein [Populus trichocarpa]
          Length = 706

 Score =  234 bits (598), Expect = 1e-59
 Identities = 112/154 (72%), Positives = 136/154 (88%), Gaps = 1/154 (0%)
 Frame = +3

Query: 333 SRPKFRVSCEIQAEEIQLRRCSPFLESALLSQDNVLSSE-WKAIPDIWRSSAQKYGDRVA 509
           SR  FR+SCE + EEI++RRCSP+LE  L+S +  L+S+ W+A+PDIWRSSA+KYGDR+A
Sbjct: 23  SRRGFRLSCETKTEEIKIRRCSPYLERTLVSSNGALTSDDWRAVPDIWRSSAEKYGDRIA 82

Query: 510 LEDPYHNPPTTMTYKQLEEEILDFSEGLRVIGLNPYEKLALFADNSCRWLVADQGIMATG 689
           + DPYH+PPT++TYKQLE+EILDFSEGLRVIG+ P EKLALFADNS RWLV DQG+MA G
Sbjct: 83  VVDPYHDPPTSLTYKQLEQEILDFSEGLRVIGVKPDEKLALFADNSYRWLVTDQGMMAMG 142

Query: 690 AINVVRGSRSSVDELLQIYNHSESVALTVDNPEL 791
           A++VVRGSRSS++ELLQIY HSESVAL VDNPEL
Sbjct: 143 AVDVVRGSRSSIEELLQIYIHSESVALAVDNPEL 176


>ref|XP_003537522.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Glycine
           max]
          Length = 720

 Score =  233 bits (593), Expect = 5e-59
 Identities = 114/150 (76%), Positives = 134/150 (89%), Gaps = 3/150 (2%)
 Frame = +3

Query: 351 VSCEIQAEEIQ--LRRCSPFLESALLSQDN-VLSSEWKAIPDIWRSSAQKYGDRVALEDP 521
           V C++Q+E  +   RRCSPFLES+LLS +  V S+EWKA+PDIWRSSA+KYGD++AL DP
Sbjct: 41  VFCQLQSETEKPLTRRCSPFLESSLLSGNGGVASNEWKAVPDIWRSSAEKYGDKIALVDP 100

Query: 522 YHNPPTTMTYKQLEEEILDFSEGLRVIGLNPYEKLALFADNSCRWLVADQGIMATGAINV 701
           YH+PP+TMTYKQLE+ ILDF+EGLRVIG+ P EKLALFADNSCRWLVADQG+MA GAINV
Sbjct: 101 YHDPPSTMTYKQLEDAILDFAEGLRVIGVRPNEKLALFADNSCRWLVADQGMMACGAINV 160

Query: 702 VRGSRSSVDELLQIYNHSESVALTVDNPEL 791
           VRGSRSS++ELLQIYNHSESVAL VDNPE+
Sbjct: 161 VRGSRSSIEELLQIYNHSESVALAVDNPEM 190


>ref|XP_002885598.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
           lyrata] gi|297331438|gb|EFH61857.1| hypothetical protein
           ARALYDRAFT_898924 [Arabidopsis lyrata subsp. lyrata]
          Length = 722

 Score =  232 bits (592), Expect = 6e-59
 Identities = 114/157 (72%), Positives = 132/157 (84%), Gaps = 1/157 (0%)
 Frame = +3

Query: 321 GYAVSRPKFRVSCEIQAEEIQLRRCSPFLESALLSQDNVL-SSEWKAIPDIWRSSAQKYG 497
           G   SR  FRV CE + +E +LRRCSPFLE   L ++  L S+EWKA+PDIWRSS +KYG
Sbjct: 36  GRRTSRKGFRVRCESKIQEKELRRCSPFLERLSLPREAALGSNEWKAVPDIWRSSVEKYG 95

Query: 498 DRVALEDPYHNPPTTMTYKQLEEEILDFSEGLRVIGLNPYEKLALFADNSCRWLVADQGI 677
           DRVA+ DPYH+PP+T TY+QLE+EILDF EGLRV+G+   EK+ALFADNSCRWLVADQGI
Sbjct: 96  DRVAVVDPYHDPPSTFTYRQLEQEILDFVEGLRVVGVKADEKIALFADNSCRWLVADQGI 155

Query: 678 MATGAINVVRGSRSSVDELLQIYNHSESVALTVDNPE 788
           MATGA+NVVRGSRSSV+ELLQIY HSESVAL VDNPE
Sbjct: 156 MATGAVNVVRGSRSSVEELLQIYCHSESVALVVDNPE 192


Top