BLASTX nr result

ID: Bupleurum21_contig00014180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014180
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520755.1| PREDICTED: uncharacterized protein LOC100793...   194   3e-47
ref|XP_003554553.1| PREDICTED: uncharacterized protein LOC100814...   194   4e-47
ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246...   190   5e-46
ref|XP_003625979.1| INO80 complex subunit B [Medicago truncatula...   183   7e-44
ref|XP_002282065.2| PREDICTED: uncharacterized protein LOC100247...   181   2e-43

>ref|XP_003520755.1| PREDICTED: uncharacterized protein LOC100793005 [Glycine max]
          Length = 587

 Score =  194 bits (493), Expect = 3e-47
 Identities = 129/295 (43%), Positives = 174/295 (58%), Gaps = 38/295 (12%)
 Frame = +3

Query: 303  MDEYGRTRLDNIANAVRRKRSQTSRRPKPESMMLSDNHDQSSLSSTPLSDDIAKVSSDEN 482
            M++ G T+ D ++NAVRRKRSQTSRRP+P+S   S+  + S LSSTP S+D  K SSDEN
Sbjct: 1    MEDLGGTQFDGLSNAVRRKRSQTSRRPRPDSQHASEGQELSPLSSTP-SEDAGKASSDEN 59

Query: 483  SGYDGSSKRKVFNLNQCISR-SSASRVEGEDAFKKI-KDGESSILYGSGGLEDGNGIDQG 656
             GYD +SKRK FNLN C+S+ SS +  E E + KK  KDG     Y +  +  G+  ++ 
Sbjct: 60   VGYDANSKRKEFNLNHCVSQTSSGTGAEDEKSHKKSKKDGGFHTFYSNEPVRSGSN-NKR 118

Query: 657  QNEGVIASSN----------------QSDMSG----------------SGVVQETKFKKV 740
             +EGV+A +N                 +D+ G                 G+  E + KKV
Sbjct: 119  CSEGVLAPANWKGSSKTKDSLDSELRNADLYGGRNPESMSLAQFGGSQDGLGNENRVKKV 178

Query: 741  KLIVGGVTRTIQTSQAT---SESGSSTKSVRLAEATRPLRKPSPQDDSEEDNLGFPSKKS 911
            KL VGGVTRTIQ + AT   S SG++ KS R ++A+RP +K   Q  + +DN     K+S
Sbjct: 179  KLKVGGVTRTIQANSATNGASGSGTTMKS-RSSDASRPRQK---QQSNSDDNNSPSDKRS 234

Query: 912  ELQGIPWKDFSRVGFSLKKDDPSTGKMPEKTSYKKHGEKSE-LHKSKRVTKKRDL 1073
             LQG+PWKDFSR GF L K++   GK+  K +  K G+KSE + KSKRV K+R L
Sbjct: 235  RLQGVPWKDFSRGGFGLGKEESLMGKISGKNTTSKLGDKSEPVRKSKRVPKRRVL 289


>ref|XP_003554553.1| PREDICTED: uncharacterized protein LOC100814323 [Glycine max]
          Length = 573

 Score =  194 bits (492), Expect = 4e-47
 Identities = 124/281 (44%), Positives = 166/281 (59%), Gaps = 24/281 (8%)
 Frame = +3

Query: 303  MDEYGRTRLDNIANAVRRKRSQTSRRPKPESMMLSDNHDQSSLSSTPLSDDIAKVSSDEN 482
            M++ G TR D ++NAVRRKRSQTSRRP+P+S   S+  + S LSSTP S+D  K SSDEN
Sbjct: 1    MEDLGGTRFDGLSNAVRRKRSQTSRRPRPDSQHASEGQELSPLSSTP-SEDTGKASSDEN 59

Query: 483  SGYDGSSKRKVFNLNQCISRSSASRVEGEDAF------------KKIKDGESSILYGSGG 626
             GYD +SKRK FNLN C+S++S+   EG   F            K+  +G  +     G 
Sbjct: 60   VGYDANSKRKEFNLNHCVSQTSSD--EGFHTFYNNEPVRSGLNNKRCSEGVLAPANWKGS 117

Query: 627  LEDGNGIDQG-QNEGVIASSNQSDM-------SGSGVVQETKFKKVKLIVGGVTRTIQTS 782
             +  + +D   +N  +    N   M       S  G+  E + KKVKL VGGVTRTIQ +
Sbjct: 118  SKVKDSLDSELRNADLYGGRNPESMGLAQFGGSQDGLGNENRVKKVKLKVGGVTRTIQAN 177

Query: 783  QAT---SESGSSTKSVRLAEATRPLRKPSPQDDSEEDNLGFPSKKSELQGIPWKDFSRVG 953
             AT   S SGS+ K+ R ++A+RP +K   Q  + +DN     K+S LQG+PWKDFSR G
Sbjct: 178  SATNGASGSGSTMKNSRSSDASRPRQK---QQSNSDDNNSPSDKRSRLQGVPWKDFSRGG 234

Query: 954  FSLKKDDPSTGKMPEKTSYKKHGEKSE-LHKSKRVTKKRDL 1073
            F L K++   GK+  K +  K G+KSE + KSKRV K+R L
Sbjct: 235  FGLGKEESLMGKISGKNTSSKLGDKSEPVRKSKRVPKRRVL 275


>ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246939 [Vitis vinifera]
          Length = 586

 Score =  190 bits (483), Expect = 5e-46
 Identities = 134/293 (45%), Positives = 169/293 (57%), Gaps = 36/293 (12%)
 Frame = +3

Query: 303  MDEYGRTRLDNIANAVRRKRSQTSRRPKPESMMLSDNHDQSSLSSTPLSDDIAKVSSDEN 482
            M+E+G TRLD I N VR+KRS+ SRRP+PES   +++ D SS   TP SDD+ KVSSDEN
Sbjct: 1    MEEFGGTRLDGIGNTVRKKRSRASRRPRPESQPHTESWDHSS---TPPSDDVCKVSSDEN 57

Query: 483  SGYDGSSKRKVFNLNQCISRS-SASRVEGEDAFKKIK--DGESSILYGSGGLED---GNG 644
            +  D SS+RK FNLNQC +++ S  R E E   K+IK  DG  +   G G + +     G
Sbjct: 58   AACDASSRRKEFNLNQCAAKAVSVGRAECESPNKRIKKEDGGYNNEQGRGRVNNKRCSEG 117

Query: 645  I------------------------DQGQNEGVIASSNQS--DMSGSGVVQETKFKKVKL 746
            +                           Q  G   SS QS  D+ GSG   E+K KKVKL
Sbjct: 118  VLAPANWKSIGKVKESPEPQSRATDHPSQRNGESQSSRQSGVDLDGSG--HESKVKKVKL 175

Query: 747  IVGGVTRTIQT---SQATSESGSSTKSVRLAEATRPLRKPSPQDDSEEDNLGFPSKKSEL 917
             VGGVTRTIQ    S   +  GSS KS R  +A RP +K   QD+S+ D+   P K+S L
Sbjct: 176  KVGGVTRTIQAQSLSNGAASGGSSRKSSRSLDAPRPRQKLILQDNSD-DSHSPPDKRSGL 234

Query: 918  QGIPWKDFSRVGFSLKKDDPSTGKMPEKTSYKKHGEKSE-LHKSKRVTKKRDL 1073
            QGIPW+DFSR GFSL K+D S GK+       K G+KS+ + KSKRV K+R L
Sbjct: 235  QGIPWRDFSRGGFSLGKEDSSMGKIS-----GKQGDKSDPVRKSKRVPKRRVL 282


>ref|XP_003625979.1| INO80 complex subunit B [Medicago truncatula]
            gi|355500994|gb|AES82197.1| INO80 complex subunit B
            [Medicago truncatula]
          Length = 566

 Score =  183 bits (464), Expect = 7e-44
 Identities = 119/274 (43%), Positives = 163/274 (59%), Gaps = 17/274 (6%)
 Frame = +3

Query: 303  MDEYGRTRLDNIANAVRRKRSQTSRRPKPESMMLSD--NHDQSSLSSTPLSDDIAK--VS 470
            M++ G TR D I+NAVRRKRSQTSRRP+P+S  + D    D S  SSTP S++ A   VS
Sbjct: 1    MEDLGSTRFDGISNAVRRKRSQTSRRPRPDSQPIPDPEGRDFSPSSSTPPSEEAADKVVS 60

Query: 471  SDENSGYDGS-SKRKVFNLNQCISRSSASRVEGEDAFKKIKDGESSIL----YGSGGLED 635
            SDEN GYD + SKRK FNLN C+++ S++   G  +    +  E  +      GS     
Sbjct: 61   SDENDGYDNTGSKRKEFNLNHCVTQPSSAG--GRSSLNNRRSSEGVLAPANWKGSSSKFK 118

Query: 636  GNGIDQGQNEGVIASSNQSDMS----GSGVVQETKFKKVKLIVGGVTRTIQTSQAT---S 794
             +   + +N  +    N    S      G+  E + KKVKL VGGVTRTIQ + A+   S
Sbjct: 119  DSFDSESKNADIYGGRNPESTSLGQLQDGLGSENRVKKVKLKVGGVTRTIQANSASNSAS 178

Query: 795  ESGSSTKSVRLAEATRPLRKPSPQDDSEEDNLGFPSKKSELQGIPWKDFSRVGFSLKKDD 974
             SGS++KS RL++++RP +K   Q  + +DN+   +KK  L+G PWKDF R GF L K++
Sbjct: 179  GSGSTSKSSRLSDSSRPRQK---QQSNSDDNISPSAKKRGLKGFPWKDFKRGGFGLGKEE 235

Query: 975  PSTGKMPEKTSYKKHGEKSE-LHKSKRVTKKRDL 1073
             S GK+  K +  K G+KSE + KSKRV K+R L
Sbjct: 236  TSMGKISIKNTSVKQGDKSEPVRKSKRVPKRRVL 269


>ref|XP_002282065.2| PREDICTED: uncharacterized protein LOC100247652 [Vitis vinifera]
          Length = 584

 Score =  181 bits (460), Expect = 2e-43
 Identities = 127/293 (43%), Positives = 161/293 (54%), Gaps = 36/293 (12%)
 Frame = +3

Query: 303  MDEYGRTRLDNIANAVRRKRSQTSRRPKPESMMLSDNHDQSSLSSTPLSDDIAKVSSDEN 482
            M+ +G    + I +  R++RS TSRRP+ ES   SD  D SS SSTP SD ++KVSSDEN
Sbjct: 1    MEGFGGFGFNGIGSTARKRRSNTSRRPRNESQSFSDYRDVSSWSSTPPSDHMSKVSSDEN 60

Query: 483  SGYDGSSKRKVFNLNQCISRSSASRVEGEDAFKKIKDGESSILYGSGGLEDGNGIDQGQ- 659
            +GY  SS+ K   LNQC S++S+  V GE   K  K+ +    +G       NG  QG  
Sbjct: 61   TGYVSSSRNK--ELNQCSSKASSVNVTGETTQKMFKNEDGG--FGESNEASINGSFQGLT 116

Query: 660  ------------NEGVIASSNQS--DMSGSGVVQ----------------ETKFKKVKLI 749
                        +EGV+A +N    D   SG++                 E K KKVKL 
Sbjct: 117  EQRHSGSDSKRCSEGVLAPANWKIRDTHTSGMISGTCDSGPEAVVDGLGNENKLKKVKLK 176

Query: 750  VGGVTRTIQ---TSQATSESGSS-TKSVRLAEATRPLRKPSPQDDSEEDNLGFPSKKSEL 917
            VGGVT TI    TS   S  GSS TKS R ++A R  +K   QDDS++DN   P K S L
Sbjct: 177  VGGVTHTIHAKSTSDGASVGGSSSTKSSRASDAPRQRQKLILQDDSDDDNSPPPVKGSGL 236

Query: 918  QGIPWKDFSRVGFSLKKDDPSTGKMPEK-TSYKKHGEKSELHKSKRVTKKRDL 1073
            +G+PWKDFSR GFS+ K D   GKMPE+  S K+ G+   + KSKRV KKR L
Sbjct: 237  RGVPWKDFSRSGFSVAKGDSLKGKMPEEGFSMKQAGKYEPVRKSKRVPKKRVL 289


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