BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014091
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|2VLC|A Chain A, Crystal Structure Of Natural Cinnamomin (Iso...    84   2e-14
gb|AAK82460.1| type 2 ribosome-inactivating protein cinnamomin I...    84   2e-14
gb|AAK82459.1| type 2 ribosome-inactivating protein cinnamomin I...    82   5e-14
gb|AAK82458.1| type 2 ribosome-inactivating protein cinnamomin I...    82   5e-14
gb|ACV85691.1| ricin-like protein 3 [synthetic construct]              82   6e-14

>pdb|2VLC|A Chain A, Crystal Structure Of Natural Cinnamomin (Isoform Iii)
           gi|223365706|pdb|2VLC|B Chain B, Crystal Structure Of
           Natural Cinnamomin (Isoform Iii)
          Length = 570

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
 Frame = -3

Query: 357 YPVIPFDTAHATVRRYRRFITNVREELESGNTAHGIPVLYNPTKLSNSDRYLLVALYN-S 181
           Y  + F T +AT   Y +FI  +R +L SG   HGIPV+   + + +S R++LV L N +
Sbjct: 23  YQTVTFTTKNATKTSYTQFIEALRAQLASGEEPHGIPVMRERSTVPDSKRFILVELSNWA 82

Query: 180 AGARITLAIDKTNTYVIGYRTEFKAVFFPEFDNSDTS--NVFPGIPRDVLPFESRFSKME 7
           A + +TLA+D TN YV+ YRT  ++ F  E DN D +  N+ P   R   PF   ++ +E
Sbjct: 83  ADSPVTLAVDVTNAYVVAYRTGSQSFFLRE-DNPDPAIENLLPDTKRYTFPFSGSYTDLE 141

Query: 6   KI 1
           ++
Sbjct: 142 RV 143


>gb|AAK82460.1| type 2 ribosome-inactivating protein cinnamomin III precursor
           [Cinnamomum camphora]
          Length = 580

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
 Frame = -3

Query: 357 YPVIPFDTAHATVRRYRRFITNVREELESGNTAHGIPVLYNPTKLSNSDRYLLVALYN-S 181
           Y  + F T +AT   Y +FI  +R +L SG   HGIPV+   + + +S R++LV L N +
Sbjct: 33  YQTVTFTTKNATKTSYTQFIEALRAQLASGEEPHGIPVMRERSTVPDSKRFILVELSNWA 92

Query: 180 AGARITLAIDKTNTYVIGYRTEFKAVFFPEFDNSDTS--NVFPGIPRDVLPFESRFSKME 7
           A + +TLA+D TN YV+ YRT  ++ F  E DN D +  N+ P   R   PF   ++ +E
Sbjct: 93  ADSPVTLAVDVTNAYVVAYRTGSQSFFLRE-DNPDPAIENLLPDTKRYTFPFSGSYTDLE 151

Query: 6   KI 1
           ++
Sbjct: 152 RV 153


>gb|AAK82459.1| type 2 ribosome-inactivating protein cinnamomin II precursor
           [Cinnamomum camphora]
          Length = 580

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
 Frame = -3

Query: 357 YPVIPFDTAHATVRRYRRFITNVREELESGNTAHGIPVLYNPTKLSNSDRYLLVALYN-S 181
           Y  + F T +AT   Y +FI  +R +L SG   HGIPV+ + + + +S R++LV L N +
Sbjct: 33  YQTVTFTTKNATKTSYTQFIEALRAQLASGEEPHGIPVMRDGSTVPDSKRFILVELSNWA 92

Query: 180 AGARITLAIDKTNTYVIGYRTEFKAVFFPEFDNSDTS--NVFPGIPRDVLPFESRFSKME 7
           A + + LA+D TN YV+ YRT  ++ F  E DN D +  N+ P   R   PF   ++ +E
Sbjct: 93  ADSPVALAVDVTNAYVVAYRTGSQSFFLRE-DNPDPAIENLLPDTKRYTFPFSGSYTDLE 151

Query: 6   KI 1
           ++
Sbjct: 152 RV 153


>gb|AAK82458.1| type 2 ribosome-inactivating protein cinnamomin I precursor
           [Cinnamomum camphora]
          Length = 581

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
 Frame = -3

Query: 357 YPVIPFDTAHATVRRYRRFITNVREELESGNTAHGIPVLYNPTKLSNSDRYLLVALYN-S 181
           Y  + F T +AT   Y +FI  +R +L SG   HGIPV+   + + +S R++LV L N +
Sbjct: 33  YQTVTFTTKNATKTSYTQFIEALRAQLASGEEPHGIPVMRERSTVPDSKRFILVELSNWA 92

Query: 180 AGARITLAIDKTNTYVIGYRTEFKAVFFPEFDNSDTS--NVFPGIPRDVLPFESRFSKME 7
           A + +TLA+D TN YV+ YRT  ++ F  E DN D +  N+ P   R   PF   ++ +E
Sbjct: 93  ADSPVTLAVDVTNAYVVAYRTGSQSFFLRE-DNPDPAIENLLPDTKRYTFPFSGSYTDLE 151

Query: 6   KI 1
            +
Sbjct: 152 GV 153


>gb|ACV85691.1| ricin-like protein 3 [synthetic construct]
          Length = 276

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
 Frame = -3

Query: 357 YPVIPFDTAHATVRRYRRFITNVREELESG-NTAHGIPVLYNPTKLSNSDRYLLVALYNS 181
           YP+I F TA AT + Y  FI  VR  L +G +  H IPVL N   LS S R++L+ L N 
Sbjct: 7   YPIINFTTAGATAQSYTTFIRAVRSHLTTGADVRHEIPVLSNRVGLSISQRFILIELSNH 66

Query: 180 AGARITLAIDKTNTYVIGYRTEFKAVFFPEFDNSDT---SNVFPGIPRD-VLPFESRFSK 13
           A   +TLA+D TN YV+GYR    A FF   +  D    +++F  +P      F   + +
Sbjct: 67  AELSVTLALDVTNVYVVGYRAGNSAYFFHPDNQEDAEAITHLFTDVPNPYTFAFGGNYDR 126

Query: 12  MEKI 1
           +E++
Sbjct: 127 LEQL 130