BLASTX nr result

ID: Bupleurum21_contig00014013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014013
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527396.1| nucleic acid binding protein, putative [Rici...   232   4e-59
ref|XP_003590506.1| Zinc finger protein [Medicago truncatula] gi...   230   1e-58
ref|XP_002519549.1| nucleic acid binding protein, putative [Rici...   228   4e-58
ref|XP_004154868.1| PREDICTED: zinc finger protein MAGPIE-like [...   228   5e-58
ref|XP_004146819.1| PREDICTED: zinc finger protein MAGPIE-like [...   228   5e-58

>ref|XP_002527396.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533206|gb|EEF34962.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 552

 Score =  232 bits (591), Expect = 4e-59
 Identities = 113/166 (68%), Positives = 120/166 (72%)
 Frame = +3

Query: 66  RNLPGNPDPDAEVIALSPKTLMATNRFVCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 245
           RNLPGNPDPDAEVIALSPKTLMATNRFVCE                              
Sbjct: 61  RNLPGNPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQL---------------- 104

Query: 246 XXXHRRGHNLPWKLKQRTNKDVVKKKVYICPETTCVHHDASRALGDLTGIKKHFSRKHGX 425
              HRRGHNLPWKLKQRTNK+V++KKVY+CPET+CVHHD SRALGDLTGIKKHFSRKHG 
Sbjct: 105 ---HRRGHNLPWKLKQRTNKEVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFSRKHGE 161

Query: 426 XXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFIT 563
                      YAVQSDWKAHSKTCGTREY+CDCGTLFSR+DSFIT
Sbjct: 162 KKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFIT 207


>ref|XP_003590506.1| Zinc finger protein [Medicago truncatula]
           gi|355479554|gb|AES60757.1| Zinc finger protein
           [Medicago truncatula]
          Length = 500

 Score =  230 bits (586), Expect = 1e-58
 Identities = 113/166 (68%), Positives = 118/166 (71%)
 Frame = +3

Query: 66  RNLPGNPDPDAEVIALSPKTLMATNRFVCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 245
           RNLPG PDPDAEVIALSPKTLMATNRF+CE                              
Sbjct: 41  RNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQL---------------- 84

Query: 246 XXXHRRGHNLPWKLKQRTNKDVVKKKVYICPETTCVHHDASRALGDLTGIKKHFSRKHGX 425
              HRRGHNLPWKL+QR+NKDV+KKKVYICPE TCVHHD SRALGDLTGIKKHFSRKHG 
Sbjct: 85  ---HRRGHNLPWKLRQRSNKDVIKKKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGE 141

Query: 426 XXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFIT 563
                      YAVQSDWKAH+KTCGTREYKCDCGTLFSRKDSFIT
Sbjct: 142 KKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFIT 187


>ref|XP_002519549.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223541412|gb|EEF42963.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 525

 Score =  228 bits (582), Expect = 4e-58
 Identities = 116/166 (69%), Positives = 118/166 (71%)
 Frame = +3

Query: 66  RNLPGNPDPDAEVIALSPKTLMATNRFVCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 245
           RNLPG PDPDAEVIALSPKTLMATNRF+CE                              
Sbjct: 44  RNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQL---------------- 87

Query: 246 XXXHRRGHNLPWKLKQRTNKDVVKKKVYICPETTCVHHDASRALGDLTGIKKHFSRKHGX 425
              HRRGHNLPWKLKQRTNK+V KKKVYICPE TCVHHDASRALGDLTGIKKHFSRKHG 
Sbjct: 88  ---HRRGHNLPWKLKQRTNKEV-KKKVYICPEKTCVHHDASRALGDLTGIKKHFSRKHGE 143

Query: 426 XXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFIT 563
                      YAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFIT
Sbjct: 144 KKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFIT 189


>ref|XP_004154868.1| PREDICTED: zinc finger protein MAGPIE-like [Cucumis sativus]
          Length = 490

 Score =  228 bits (581), Expect = 5e-58
 Identities = 111/166 (66%), Positives = 118/166 (71%)
 Frame = +3

Query: 66  RNLPGNPDPDAEVIALSPKTLMATNRFVCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 245
           RNLPGNPDPDAEVIALSPKTLMATNRFVCE                              
Sbjct: 23  RNLPGNPDPDAEVIALSPKTLMATNRFVCEICSKGFQRDQNLQL---------------- 66

Query: 246 XXXHRRGHNLPWKLKQRTNKDVVKKKVYICPETTCVHHDASRALGDLTGIKKHFSRKHGX 425
              HRRGHNLPWKLKQR NK+V++KKVY+CPET+CVHHD SRALGDLTGIKKHF RKHG 
Sbjct: 67  ---HRRGHNLPWKLKQRANKEVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGE 123

Query: 426 XXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFIT 563
                      YAVQSDWKAHSKTCGTREY+CDCGTLFSR+DSFIT
Sbjct: 124 KKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFIT 169


>ref|XP_004146819.1| PREDICTED: zinc finger protein MAGPIE-like [Cucumis sativus]
          Length = 527

 Score =  228 bits (581), Expect = 5e-58
 Identities = 111/166 (66%), Positives = 118/166 (71%)
 Frame = +3

Query: 66  RNLPGNPDPDAEVIALSPKTLMATNRFVCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 245
           RNLPGNPDPDAEVIALSPKTLMATNRFVCE                              
Sbjct: 58  RNLPGNPDPDAEVIALSPKTLMATNRFVCEICSKGFQRDQNLQL---------------- 101

Query: 246 XXXHRRGHNLPWKLKQRTNKDVVKKKVYICPETTCVHHDASRALGDLTGIKKHFSRKHGX 425
              HRRGHNLPWKLKQR NK+V++KKVY+CPET+CVHHD SRALGDLTGIKKHF RKHG 
Sbjct: 102 ---HRRGHNLPWKLKQRANKEVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGE 158

Query: 426 XXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFIT 563
                      YAVQSDWKAHSKTCGTREY+CDCGTLFSR+DSFIT
Sbjct: 159 KKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFIT 204


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