BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013986
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511576.1| pentatricopeptide repeat-containing protein,...   118   4e-25
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
emb|CBI15227.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_002511576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550691|gb|EEF52178.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 438

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/104 (54%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3   LIAGKFILHCAVLIADALHYAHRLFLDIPKPDVFMYNTLIRGFSESNFHQDSFTTFIKMC 182
           L+ GK +LHC ++++D++ YA  LF D P PDVFMYNTLIRG +ES+  Q S  TF+++ 
Sbjct: 38  LLIGKLLLHCTIVLSDSIDYALSLFRDTPNPDVFMYNTLIRGLAESDSPQKSIATFLELR 97

Query: 183 RSS--SPDSYSFAFILKAAAMLRSFDAGIQLHSMSMKHGLHNHV 308
           + S  SPDS+SFAF+LKAAA LRS   GIQLH  + K+GL+ H+
Sbjct: 98  KESALSPDSFSFAFVLKAAAYLRSLRGGIQLHCQAWKYGLNAHL 141


>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
           gi|449487109|ref|XP_004157499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/104 (54%), Positives = 78/104 (75%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3   LIAGKFILHCAVLIADALHYAHRLFLDIPKPDVFMYNTLIRGFSESNFHQDSFTTFIKMC 182
           L++GK +LHCAV + D+LHYA RLFLDI  PDVFMYNTLIRG S+S+   ++   F++M 
Sbjct: 38  LVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMR 97

Query: 183 RSS--SPDSYSFAFILKAAAMLRSFDAGIQLHSMSMKHGLHNHV 308
           R S   PDS+SFAF+LKAAA  R+   G+QLH +++ +GL +H+
Sbjct: 98  RKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGLDSHL 141


>emb|CBI15227.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3   LIAGKFILHCAVLIADALHYAHRLFLDIPKPDVFMYNTLIRGFSESNFHQDSFTTFIKMC 182
           +IAGK +LH AV + DAL YA RLFL  P PDVFM+NTLIRG +ES+  Q+S  TF++M 
Sbjct: 38  IIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMR 97

Query: 183 R--SSSPDSYSFAFILKAAAMLRSFDAGIQLHSMSMKHGLHNHV 308
           R  ++  DS+SFAF+LKAAA  RS ++GIQLH  ++ HGL  H+
Sbjct: 98  RRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHL 141


>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3   LIAGKFILHCAVLIADALHYAHRLFLDIPKPDVFMYNTLIRGFSESNFHQDSFTTFIKMC 182
           +IAGK +LH AV + DAL YA RLFL  P PDVFM+NTLIRG +ES+  Q+S  TF++M 
Sbjct: 38  IIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMR 97

Query: 183 R--SSSPDSYSFAFILKAAAMLRSFDAGIQLHSMSMKHGLHNHV 308
           R  ++  DS+SFAF+LKAAA  RS ++GIQLH  ++ HGL  H+
Sbjct: 98  RRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHL 141


>ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|222838272|gb|EEE76637.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  114 bits (285), Expect = 8e-24
 Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
 Frame = +3

Query: 6   IAGKFILHCAVLIADALHYAHRLFLDIPKPDVFMYNTLIRGFSESNFHQDSFTTFIKMCR 185
           IAGK + HCA+ ++D+L YA RLF   P PDVFM+NTLIRG  ES+  QDS   FI+M R
Sbjct: 39  IAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRR 98

Query: 186 S--SSPDSYSFAFILKAAAMLRSFDAGIQLHSMSMKHGLHNHV 308
           +  S PDS+SFAFI+KAAA LRS   GIQLH  ++ HGL  H+
Sbjct: 99  NSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHL 141