BLASTX nr result

ID: Bupleurum21_contig00013979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013979
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134219.1| PREDICTED: uncharacterized protein LOC101205...    56   6e-06
ref|XP_003547383.1| PREDICTED: uncharacterized protein LOC100784...    55   1e-05

>ref|XP_004134219.1| PREDICTED: uncharacterized protein LOC101205873 [Cucumis sativus]
           gi|449515337|ref|XP_004164706.1| PREDICTED:
           uncharacterized protein LOC101231327 [Cucumis sativus]
          Length = 385

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/149 (28%), Positives = 54/149 (36%), Gaps = 8/149 (5%)
 Frame = +1

Query: 178 VMEVVQEDYGDGNMQCKNHPYKTNSPAGGICVLCLQEKLGKLAXXXXXXXXXXXXXXXXX 357
           +     +D  D  M+C  HPY+TN   GGIC LCLQEKLGKL                  
Sbjct: 4   IPNAADDDDMDDGMKCTYHPYRTNQ--GGICALCLQEKLGKLVSSSPLPLPPSSSSSSSS 61

Query: 358 XXXXXXXXXXHHSKKSRFQFFSTSKN--------KKIXXXXXXXXXXXXXXIIFKRSKSS 513
                      HS  S  QF   ++N         +               I F+RSKS+
Sbjct: 62  ASFRSDFAAARHSALSSLQFPPQNRNHCHDHAAPARTRIPFLSKKKKKQPEIGFRRSKST 121

Query: 514 VMPRRGGDIYTDMSRTNDLSTPRKLKFWS 600
             P RG   + D     D S   +   WS
Sbjct: 122 TTPARGK--FLDPYHAEDYSPKNRGWIWS 148


>ref|XP_003547383.1| PREDICTED: uncharacterized protein LOC100784469 [Glycine max]
          Length = 337

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 2/139 (1%)
 Frame = +1

Query: 199 DYGDGNMQCKNHPYK-TNSPAGGICVLCLQEKLGKLAXXXXXXXXXXXXXXXXXXXXXXX 375
           +  DG MQC NHP+  +N+  GGIC  CLQ+KL  L                        
Sbjct: 17  EISDG-MQCMNHPHNNSNNNPGGICAFCLQDKLRNLLSSSPPLSSSSSPSPSFTPPPPPS 75

Query: 376 XXXXH-HSKKSRFQFFSTSKNKKIXXXXXXXXXXXXXXIIFKRSKSSVMPRRGGDIYTDM 552
               H H+ +SR  F    KN                 IIFKRSKS+  P+R        
Sbjct: 76  VKTDHDHNTRSRLPFLVPKKNNN-KKPSSYTNISSSANIIFKRSKSTATPKR-----NQF 129

Query: 553 SRTNDLSTPRKLKFWSFTH 609
               D S  ++  FWSF +
Sbjct: 130 LEEKDFSPRKRNGFWSFLY 148


Top