BLASTX nr result

ID: Bupleurum21_contig00013959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013959
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306686.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-16
ref|XP_002526128.1| mitochondrial carrier protein, putative [Ric...    55   2e-15
ref|XP_002263642.1| PREDICTED: protein MITOFERRINLIKE 1, chlorop...    55   3e-14
ref|NP_199028.1| Mitochondrial substrate carrier family protein ...    52   8e-13
ref|XP_002863818.1| mitochondrial substrate carrier family prote...    51   8e-12

>ref|XP_002306686.1| predicted protein [Populus trichocarpa] gi|222856135|gb|EEE93682.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 57.8 bits (138), Expect(2) = 7e-16
 Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
 Frame = -2

Query: 307 ARASLSLLTAPLDVVKARMMTLVRKDAV--------AGVSATVKQILMDDGWVDFAHENS 152
           A A  + LT PLDVVK R+MT + KD V        +GVSATVKQIL ++GWV F     
Sbjct: 295 AGAISASLTTPLDVVKTRLMTQMNKDVVDKAAAVMYSGVSATVKQILTEEGWVGFTRGMG 354

Query: 151 ACFSLAYSACFS 116
               + +SACFS
Sbjct: 355 P--RVVHSACFS 364



 Score = 50.8 bits (120), Expect(2) = 7e-16
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -3

Query: 120 SALGYFAFETARLTILHQYLKQKQLRE 40
           SALGYFAFETARLTILH+YL+ K+LRE
Sbjct: 364 SALGYFAFETARLTILHRYLRHKELRE 390


>ref|XP_002526128.1| mitochondrial carrier protein, putative [Ricinus communis]
           gi|223534505|gb|EEF36204.1| mitochondrial carrier
           protein, putative [Ricinus communis]
          Length = 393

 Score = 55.1 bits (131), Expect(2) = 2e-15
 Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 15/76 (19%)
 Frame = -2

Query: 307 ARASLSLLTAPLDVVKARMMTLVRKDAV--------AGVSATVKQILMDDGWVDFAHE-- 158
           A A  + +T PLDV+K R+MT V K+ V        +GVSATVKQI+ ++GWV F     
Sbjct: 292 AGAISASITTPLDVIKTRLMTQVNKEVVDKVSAAMYSGVSATVKQIMKEEGWVGFTRGMG 351

Query: 157 ----NSACFS-LAYSA 125
               +SACFS L Y A
Sbjct: 352 PRVLHSACFSALGYFA 367



 Score = 52.0 bits (123), Expect(2) = 2e-15
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -3

Query: 120 SALGYFAFETARLTILHQYLKQKQLREDNL 31
           SALGYFAFETARLT+LHQYLK K+LR+ +L
Sbjct: 361 SALGYFAFETARLTLLHQYLKHKELRDLDL 390


>ref|XP_002263642.1| PREDICTED: protein MITOFERRINLIKE 1, chloroplastic [Vitis vinifera]
          Length = 401

 Score = 54.7 bits (130), Expect(2) = 3e-14
 Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
 Frame = -2

Query: 307 ARASLSLLTAPLDVVKARMMTLVRKDAV--------AGVSATVKQILMDDGWVDFAHENS 152
           A A  + LT PLDVVK R+MT V  +A+        +GVSATVKQIL D+GWV       
Sbjct: 300 AGAISASLTTPLDVVKTRLMTQVHGEAINKVSAAMYSGVSATVKQILRDEGWVGLTSGMG 359

Query: 151 ACFSLAYSACFS 116
               + +SACFS
Sbjct: 360 P--RVVHSACFS 369



 Score = 48.5 bits (114), Expect(2) = 3e-14
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = -3

Query: 120 SALGYFAFETARLTILHQYLKQKQLREDNL 31
           SALGYFAFETA++ ILHQYLK+K+L E N+
Sbjct: 369 SALGYFAFETAKMAILHQYLKRKELCEMNV 398


>ref|NP_199028.1| Mitochondrial substrate carrier family protein [Arabidopsis
           thaliana] gi|75309103|sp|Q9FHX2.1|MFL1_ARATH RecName:
           Full=Protein MITOFERRINLIKE 1, chloroplastic;
           Short=AtMFL1; Flags: Precursor
           gi|9757958|dbj|BAB08446.1| mitochondrial carrier
           protein-like [Arabidopsis thaliana]
           gi|332007388|gb|AED94771.1| Mitochondrial substrate
           carrier family protein [Arabidopsis thaliana]
          Length = 412

 Score = 52.0 bits (123), Expect(2) = 8e-13
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
 Frame = -2

Query: 307 ARASLSLLTAPLDVVKARMMTLVRKDAV--------AGVSATVKQILMDDGWVDFAHENS 152
           A A  + +T PLDVVK R+MT +  +AV         GV+ TVKQIL ++GWV F     
Sbjct: 310 AGAISASITTPLDVVKTRLMTQIHVEAVDKLGGAMYTGVAGTVKQILTEEGWVGFTRGMG 369

Query: 151 ACFSLAYSACFS 116
               + +SACFS
Sbjct: 370 P--RVVHSACFS 379



 Score = 46.2 bits (108), Expect(2) = 8e-13
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = -3

Query: 120 SALGYFAFETARLTILHQYLKQKQLREDNL 31
           SA+GYFAFETARLTIL++YLK+K+  E N+
Sbjct: 379 SAIGYFAFETARLTILNEYLKRKEESEANV 408


>ref|XP_002863818.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309653|gb|EFH40077.1| mitochondrial
           substrate carrier family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 412

 Score = 50.8 bits (120), Expect(2) = 8e-12
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
 Frame = -2

Query: 307 ARASLSLLTAPLDVVKARMMTLVRKDAV--------AGVSATVKQILMDDGWVDFAHENS 152
           A A  + +T PLDVVK R+MT +  +AV         GV+ TV+QIL ++GWV F     
Sbjct: 310 AGAISASITTPLDVVKTRLMTQIHVEAVNKLGAAMYTGVAGTVRQILKEEGWVGFTRGMG 369

Query: 151 ACFSLAYSACFS 116
               + +SACFS
Sbjct: 370 P--RVVHSACFS 379



 Score = 43.9 bits (102), Expect(2) = 8e-12
 Identities = 19/24 (79%), Positives = 24/24 (100%)
 Frame = -3

Query: 120 SALGYFAFETARLTILHQYLKQKQ 49
           SA+GYFAFETARLTIL++YLK+K+
Sbjct: 379 SAIGYFAFETARLTILNEYLKRKE 402


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