BLASTX nr result

ID: Bupleurum21_contig00013939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013939
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307155.1| predicted protein [Populus trichocarpa] gi|1...    96   5e-18
ref|XP_002520916.1| conserved hypothetical protein [Ricinus comm...    90   3e-16
ref|XP_002266745.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTR...    89   6e-16
ref|XP_003624844.1| hypothetical protein MTR_7g088200 [Medicago ...    85   8e-15
gb|ABD28653.2| phytochrome kinase substrate 1-like protein, , pu...    85   8e-15

>ref|XP_002307155.1| predicted protein [Populus trichocarpa] gi|118485620|gb|ABK94660.1|
           unknown [Populus trichocarpa]
           gi|222856604|gb|EEE94151.1| predicted protein [Populus
           trichocarpa]
          Length = 551

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 60/120 (50%), Positives = 75/120 (62%), Gaps = 9/120 (7%)
 Frame = -3

Query: 357 QGVMIDDSEISIFDAQKYFN----DTNVTKTRSEVSTSVMCTTDDHDDRAMIGNNNNKVS 190
           Q   +DDSEISIFDAQKYFN    DT +++  S V+  +   ++ +D            S
Sbjct: 54  QITQVDDSEISIFDAQKYFNESGGDTKLSRRVSPVNAKLERVSERYD-----------FS 102

Query: 189 NPSRLSCGSSS--GYNR---VRSFHATPTASSEASWNSQTGLLSHPAGGLAVSLRSLPNS 25
           +  RLS  SSS  GY R    RSFHATPTASSEASWNSQ GLLS+P G +AVS+R+ P +
Sbjct: 103 SLPRLSSASSSVDGYGRNYRARSFHATPTASSEASWNSQAGLLSNPPGAIAVSMRNPPRN 162


>ref|XP_002520916.1| conserved hypothetical protein [Ricinus communis]
           gi|223539882|gb|EEF41461.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 549

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 62/133 (46%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
 Frame = -3

Query: 408 YLKPPSDDNLESKSSAPQGVMIDDSEISIFDAQKYFNDTNVTKTRSEVSTSVMCTTDDHD 229
           YLKP   DN             DD EISIFDAQKYFN+++ +  R     S +       
Sbjct: 49  YLKPEQLDN-----------QADDPEISIFDAQKYFNESSGSDHRVGKRVSPV------- 90

Query: 228 DRAMIGNNNNKVSNPSRLSCGSSS--GYNR---VRSFHATPTASSEASWNSQTGLLSHPA 64
                  N   + +  R S  SSS  GY R    RSFHATPTASSEASWNSQTGLLS+P 
Sbjct: 91  -------NVINIESIPRFSSVSSSVDGYGRNYRARSFHATPTASSEASWNSQTGLLSNPP 143

Query: 63  GGLAVSLRSLPNS 25
           G +AVS+R+ P S
Sbjct: 144 GAIAVSMRNPPPS 156


>ref|XP_002266745.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4 [Vitis vinifera]
          Length = 550

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 58/139 (41%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
 Frame = -3

Query: 408 YLKPPSDDNLESKSSAPQGVMIDDSEISIFDAQKYFNDTNVTKTRSEVSTSVMCTTDDHD 229
           YL P   D+L          + +DSEISIFDAQKYFN+++  + R   S  V     +H 
Sbjct: 37  YLNP---DDLTPAPKKDVPAIAEDSEISIFDAQKYFNESSEHQQRE--SKRVAPVGAEHC 91

Query: 228 DRAMIGNNNNKVSNPSRLSCGSSSGYNR---VRSFHATPTASSEASWNSQTGLLSHPAGG 58
           +   +   +         S  S  GY R    RSFHATPTASSEASWNSQTGLL +P G 
Sbjct: 92  ESQFVTRTS---------SVSSVEGYGRNYRARSFHATPTASSEASWNSQTGLLCNPPGT 142

Query: 57  LAVSLRSLPNSTLNSSNQE 1
           + VS+RS+ +   N S ++
Sbjct: 143 IGVSVRSIGSEKKNVSGRK 161


>ref|XP_003624844.1| hypothetical protein MTR_7g088200 [Medicago truncatula]
           gi|355499859|gb|AES81062.1| hypothetical protein
           MTR_7g088200 [Medicago truncatula]
          Length = 498

 Score = 85.1 bits (209), Expect = 8e-15
 Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 17/152 (11%)
 Frame = -3

Query: 408 YLKP--PSDDNLESKSSAPQGVMIDDSEISIFDAQKYFND-TNVTKTRSEVSTSVMCTTD 238
           YL P  P++ N   K   P       SE+SIFDA KYFN+ TN    +    +S     +
Sbjct: 32  YLTPQKPNNHNHHHKLDDPT------SELSIFDAHKYFNEGTNNDNIQKVTISSNNNNNN 85

Query: 237 DHDDRA--MIGNNNNK-----VSNPSRLSCGSS-SGYN-----RVRSFHA-TPTASSEAS 100
           +++ R   ++ N NN+     + + +R S  SS  GY      R RSFHA TPTASSEAS
Sbjct: 86  NNNSRVSPVVINVNNETESIVIPDTTRYSSASSMDGYANIRNYRARSFHAATPTASSEAS 145

Query: 99  WNSQTGLLSHPAGGLAVSLRSLPNSTLNSSNQ 4
           WNSQ GLLSHPAG ++V++++  N   N+SN+
Sbjct: 146 WNSQQGLLSHPAGAISVNIKNPSNPNPNNSNK 177


>gb|ABD28653.2| phytochrome kinase substrate 1-like protein, , putative [Medicago
           truncatula]
          Length = 502

 Score = 85.1 bits (209), Expect = 8e-15
 Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 17/152 (11%)
 Frame = -3

Query: 408 YLKP--PSDDNLESKSSAPQGVMIDDSEISIFDAQKYFND-TNVTKTRSEVSTSVMCTTD 238
           YL P  P++ N   K   P       SE+SIFDA KYFN+ TN    +    +S     +
Sbjct: 36  YLTPQKPNNHNHHHKLDDPT------SELSIFDAHKYFNEGTNNDNIQKVTISSNNNNNN 89

Query: 237 DHDDRA--MIGNNNNK-----VSNPSRLSCGSS-SGYN-----RVRSFHA-TPTASSEAS 100
           +++ R   ++ N NN+     + + +R S  SS  GY      R RSFHA TPTASSEAS
Sbjct: 90  NNNSRVSPVVINVNNETESIVIPDTTRYSSASSMDGYANIRNYRARSFHAATPTASSEAS 149

Query: 99  WNSQTGLLSHPAGGLAVSLRSLPNSTLNSSNQ 4
           WNSQ GLLSHPAG ++V++++  N   N+SN+
Sbjct: 150 WNSQQGLLSHPAGAISVNIKNPSNPNPNNSNK 181


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