BLASTX nr result

ID: Bupleurum21_contig00013936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013936
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24395.3| unnamed protein product [Vitis vinifera]              316   4e-84
ref|XP_002272646.2| PREDICTED: uncharacterized protein LOC100259...   300   3e-79
ref|XP_003542327.1| PREDICTED: uncharacterized protein LOC100780...   292   8e-77
ref|XP_002328213.1| predicted protein [Populus trichocarpa] gi|2...   292   8e-77
ref|XP_004137358.1| PREDICTED: cold shock domain-containing prot...   289   7e-76

>emb|CBI24395.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  316 bits (810), Expect = 4e-84
 Identities = 144/199 (72%), Positives = 158/199 (79%)
 Frame = +1

Query: 280 EISDNIVLRKLLRGPRYFDPQDSGLGACYKCGEEGHMAVRCTMAKRKKPCFVCGSLDHNA 459
           E SDNIVLRKLLRGPRYFDP DSG GACY CGEEGH AV C   KRKKPCFVCGSL+HNA
Sbjct: 99  EGSDNIVLRKLLRGPRYFDPPDSGWGACYNCGEEGHNAVNCASVKRKKPCFVCGSLEHNA 158

Query: 460 KQCAKGNDCFICKKSGHRAKDCPKKKIDGPSLIAKLCLKCGQSGHDMFSCRSSYSSDDLK 639
           KQC KG DCFICKK GHRAKDCP+K   G S  +K+CLKCG S HDMFSCR+ YS +DLK
Sbjct: 159 KQCMKGQDCFICKKGGHRAKDCPEKHRSG-SQNSKICLKCGDSRHDMFSCRNDYSPEDLK 217

Query: 640 EIQCYICKNFGHLCCAKYTSTSGGKLSCYRCGRSGHTGLACKGLHLEINDVDSPSSCYRC 819
           EIQCYICK+FGHLCC  Y  T   + SCY+CG+ GHTGLAC  L+ E  DV +PSSCYRC
Sbjct: 218 EIQCYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLACARLNAETADVQTPSSCYRC 277

Query: 820 GKAGHFARECTTSAKSSKR 876
           G+ GHFAREC +S K SKR
Sbjct: 278 GEQGHFARECKSSTKVSKR 296


>ref|XP_002272646.2| PREDICTED: uncharacterized protein LOC100259916 [Vitis vinifera]
          Length = 481

 Score =  300 bits (768), Expect = 3e-79
 Identities = 136/199 (68%), Positives = 152/199 (76%)
 Frame = +1

Query: 280 EISDNIVLRKLLRGPRYFDPQDSGLGACYKCGEEGHMAVRCTMAKRKKPCFVCGSLDHNA 459
           E SDNIVLRKLLRGPRYFDP DSG GACY CGEEGH AV C   KRKKPCFVCGSL+HNA
Sbjct: 148 EGSDNIVLRKLLRGPRYFDPPDSGWGACYNCGEEGHNAVNCASVKRKKPCFVCGSLEHNA 207

Query: 460 KQCAKGNDCFICKKSGHRAKDCPKKKIDGPSLIAKLCLKCGQSGHDMFSCRSSYSSDDLK 639
           KQC KG DCFICKK GHRAKDCP+K   G S  +K+CLKCG S HDMFSCR+ YS +DLK
Sbjct: 208 KQCMKGQDCFICKKGGHRAKDCPEKHRSG-SQNSKICLKCGDSRHDMFSCRNDYSPEDLK 266

Query: 640 EIQCYICKNFGHLCCAKYTSTSGGKLSCYRCGRSGHTGLACKGLHLEINDVDSPSSCYRC 819
           EIQCYICK+FGHLCC  Y  T   + SCY+CG+ GHTGLAC  L+ E  DV +PSSCYRC
Sbjct: 267 EIQCYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLACARLNAETADVQTPSSCYRC 326

Query: 820 GKAGHFARECTTSAKSSKR 876
           G+ GHF  +  +   +  R
Sbjct: 327 GEQGHFVSKRYSEVSTQSR 345


>ref|XP_003542327.1| PREDICTED: uncharacterized protein LOC100780476 [Glycine max]
          Length = 529

 Score =  292 bits (747), Expect = 8e-77
 Identities = 138/262 (52%), Positives = 171/262 (65%)
 Frame = +1

Query: 103 SRLEAEIEDLSTCTELKEEAEKIDVIEAKDDHNXXXXXXXXXXXXXXXXXXDISIKDKTE 282
           ++L+ E  D S    + EE E  + I A ++H                      ++ + E
Sbjct: 101 AKLKVEAGDQSVV--IAEEQEMEETINATENH----------------------VEGRPE 136

Query: 283 ISDNIVLRKLLRGPRYFDPQDSGLGACYKCGEEGHMAVRCTMAKRKKPCFVCGSLDHNAK 462
           I DN+VLRKLLRGPRYFDP D+  GAC+ CGEEGH AV C+  KRKKPC+VCG L HNA+
Sbjct: 137 IGDNMVLRKLLRGPRYFDPPDNSWGACFNCGEEGHAAVNCSAVKRKKPCYVCGCLGHNAR 196

Query: 463 QCAKGNDCFICKKSGHRAKDCPKKKIDGPSLIAKLCLKCGQSGHDMFSCRSSYSSDDLKE 642
           QC+K  DCFICKK GHRAKDCP+K       IA +CLKCG SGHD+FSCR+ YS DDLKE
Sbjct: 197 QCSKVQDCFICKKGGHRAKDCPEKHTSTSKSIA-ICLKCGNSGHDIFSCRNDYSQDDLKE 255

Query: 643 IQCYICKNFGHLCCAKYTSTSGGKLSCYRCGRSGHTGLACKGLHLEINDVDSPSSCYRCG 822
           IQCY+CK  GHLCC      + G++SCY+CG+ GH GLAC  L  EI    +PSSC++CG
Sbjct: 256 IQCYVCKRLGHLCCVNTDDATAGEISCYKCGQLGHMGLACLRLQDEIASGATPSSCFKCG 315

Query: 823 KAGHFARECTTSAKSSKRSRGG 888
           + GHFARECT+S     +S  G
Sbjct: 316 EEGHFARECTSSINFPPQSGKG 337


>ref|XP_002328213.1| predicted protein [Populus trichocarpa] gi|222837728|gb|EEE76093.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  292 bits (747), Expect = 8e-77
 Identities = 135/202 (66%), Positives = 153/202 (75%), Gaps = 1/202 (0%)
 Frame = +1

Query: 280 EISDNIVLRKLLRGPRYFDPQDSGLGACYKCGEEGHMAVRC-TMAKRKKPCFVCGSLDHN 456
           E S N+VLRKLLRGPRYFDP DSG   CY CGEEGHMAV C T  K+ KPCFVCGSL+H 
Sbjct: 171 EESVNVVLRKLLRGPRYFDPPDSGWSTCYNCGEEGHMAVNCPTPMKKIKPCFVCGSLEHG 230

Query: 457 AKQCAKGNDCFICKKSGHRAKDCPKKKIDGPSLIAKLCLKCGQSGHDMFSCRSSYSSDDL 636
           AKQC+KG DCFICKKSGHRAK+CP K    P   +K+CL CG+SGH+MFSC+  YS +DL
Sbjct: 231 AKQCSKGRDCFICKKSGHRAKNCPDKYNATPQS-SKICLNCGESGHEMFSCKKDYSPNDL 289

Query: 637 KEIQCYICKNFGHLCCAKYTSTSGGKLSCYRCGRSGHTGLACKGLHLEINDVDSPSSCYR 816
           KEIQCYICK+FGHLCC      S  ++SCYRCG  GH+GL C  L+ E    +SPS CYR
Sbjct: 290 KEIQCYICKSFGHLCCVTSGDDSLRQVSCYRCGELGHSGLECGRLNEEATMAESPSLCYR 349

Query: 817 CGKAGHFARECTTSAKSSKRSR 882
           CG+ GHFARECT SAK  KRSR
Sbjct: 350 CGEGGHFARECTRSAKGGKRSR 371


>ref|XP_004137358.1| PREDICTED: cold shock domain-containing protein 3-like [Cucumis
           sativus]
          Length = 406

 Score =  289 bits (739), Expect = 7e-76
 Identities = 131/202 (64%), Positives = 155/202 (76%)
 Frame = +1

Query: 277 TEISDNIVLRKLLRGPRYFDPQDSGLGACYKCGEEGHMAVRCTMAKRKKPCFVCGSLDHN 456
           T  +DN V RKLLRGPRYFDP DS  G CY CGEEGH AV C  AKRK+PCFVCGSL+HN
Sbjct: 161 TGTTDNNVFRKLLRGPRYFDPPDSW-GTCYNCGEEGHNAVNCKSAKRKRPCFVCGSLEHN 219

Query: 457 AKQCAKGNDCFICKKSGHRAKDCPKKKIDGPSLIAKLCLKCGQSGHDMFSCRSSYSSDDL 636
           AK C+K  DCFICKKSGHRA  CP+K  +G S + ++CLKCG SGHDMFSC++ Y+ DDL
Sbjct: 220 AKSCSKARDCFICKKSGHRANACPEKHKNGSSSL-RICLKCGDSGHDMFSCQNHYADDDL 278

Query: 637 KEIQCYICKNFGHLCCAKYTSTSGGKLSCYRCGRSGHTGLACKGLHLEINDVDSPSSCYR 816
           K+IQCYIC+ FGHLCC  +TS +   +SCY+CG++GHTGL+C  L  E +   S S CYR
Sbjct: 279 KKIQCYICQKFGHLCCVNFTSDT-SVVSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYR 337

Query: 817 CGKAGHFARECTTSAKSSKRSR 882
           CG  GHFARECT+S KS KR+R
Sbjct: 338 CGDEGHFARECTSSTKSGKRNR 359


Top