BLASTX nr result

ID: Bupleurum21_contig00013934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013934
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273319.2| PREDICTED: transcription factor ASG4-like [V...   162   3e-38
emb|CBI22649.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002305938.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38
ref|XP_002327608.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|XP_002513646.1| DNA binding protein, putative [Ricinus commu...   149   2e-34

>ref|XP_002273319.2| PREDICTED: transcription factor ASG4-like [Vitis vinifera]
          Length = 337

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/165 (53%), Positives = 108/165 (65%), Gaps = 2/165 (1%)
 Frame = +2

Query: 2   VIQIRSHAQKYFLKVEKSGSNEHLXXXXXXXXXXXXXXQKASKNAPVLSQVNATPSSSQP 181
           VIQIRSHAQKYFLKV+K+G NEHL               KASKNAPVLSQ   +  SS  
Sbjct: 94  VIQIRSHAQKYFLKVQKNGINEHLPPPRPKRKAAHPYPHKASKNAPVLSQGTGSFHSSAA 153

Query: 182 --ETGFIRRVESPPLLKNPAAGTAAVSSQTENSMQTVGTSNMTKGNIRSARQLLANNCCS 355
             ETG++ R +S  +L+NP    AA S       QTVG S++ KG++RSA   + NNCCS
Sbjct: 154 LRETGYVLRPDSSSILRNPITSAAASSWTNSKPAQTVGLSHVAKGDMRSAGPTVPNNCCS 213

Query: 356 STESTPRTQPIVEMNDQRSHGSSLRVLPDFAEVYSFIGSVFDPNT 490
           S ESTPR +  VE ++Q +H  +LRVLPDF +VY FIGSVFDPN+
Sbjct: 214 SAESTPRGRTTVEASEQGNHVHTLRVLPDFVQVYRFIGSVFDPNS 258


>emb|CBI22649.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/165 (53%), Positives = 108/165 (65%), Gaps = 2/165 (1%)
 Frame = +2

Query: 2   VIQIRSHAQKYFLKVEKSGSNEHLXXXXXXXXXXXXXXQKASKNAPVLSQVNATPSSSQP 181
           VIQIRSHAQKYFLKV+K+G NEHL               KASKNAPVLSQ   +  SS  
Sbjct: 75  VIQIRSHAQKYFLKVQKNGINEHLPPPRPKRKAAHPYPHKASKNAPVLSQGTGSFHSSAA 134

Query: 182 --ETGFIRRVESPPLLKNPAAGTAAVSSQTENSMQTVGTSNMTKGNIRSARQLLANNCCS 355
             ETG++ R +S  +L+NP    AA S       QTVG S++ KG++RSA   + NNCCS
Sbjct: 135 LRETGYVLRPDSSSILRNPITSAAASSWTNSKPAQTVGLSHVAKGDMRSAGPTVPNNCCS 194

Query: 356 STESTPRTQPIVEMNDQRSHGSSLRVLPDFAEVYSFIGSVFDPNT 490
           S ESTPR +  VE ++Q +H  +LRVLPDF +VY FIGSVFDPN+
Sbjct: 195 SAESTPRGRTTVEASEQGNHVHTLRVLPDFVQVYRFIGSVFDPNS 239


>ref|XP_002305938.1| predicted protein [Populus trichocarpa] gi|222848902|gb|EEE86449.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  161 bits (408), Expect = 5e-38
 Identities = 93/164 (56%), Positives = 111/164 (67%), Gaps = 2/164 (1%)
 Frame = +2

Query: 2   VIQIRSHAQKYFLKVEKSGSNEHLXXXXXXXXXXXXXXQKASKNAPVLSQVN-ATPSSSQ 178
           +IQIRSHAQKYFLKV+KSG+NEHL              QKASKNA VLSQ + A  SSS 
Sbjct: 96  IIQIRSHAQKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKNAIVLSQPSEAFQSSSA 155

Query: 179 P-ETGFIRRVESPPLLKNPAAGTAAVSSQTENSMQTVGTSNMTKGNIRSARQLLANNCCS 355
           P E G++ R +S  +  NP A  A  SS T N++ TV  SN TKG +       ANNCCS
Sbjct: 156 PLEPGYVLRPDSSSIPMNPIASAAVASSWT-NNVPTVSLSNQTKGPVA------ANNCCS 208

Query: 356 STESTPRTQPIVEMNDQRSHGSSLRVLPDFAEVYSFIGSVFDPN 487
           STESTPRT+PI +  +Q +HG S+RVLPDF++VY FIGSVFDPN
Sbjct: 209 STESTPRTKPIGKTAEQGNHGHSMRVLPDFSQVYGFIGSVFDPN 252


>ref|XP_002327608.1| predicted protein [Populus trichocarpa] gi|222836162|gb|EEE74583.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  155 bits (391), Expect = 4e-36
 Identities = 90/164 (54%), Positives = 111/164 (67%), Gaps = 2/164 (1%)
 Frame = +2

Query: 2   VIQIRSHAQKYFLKVEKSGSNEHLXXXXXXXXXXXXXXQKASKNAPVLSQVN-ATPSSSQ 178
           VIQIRSHAQKYFLKV+KSG++EHL              QKASKNA VLSQ + ++ SSS 
Sbjct: 59  VIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAVVLSQPSRSSHSSSA 118

Query: 179 P-ETGFIRRVESPPLLKNPAAGTAAVSSQTENSMQTVGTSNMTKGNIRSARQLLANNCCS 355
           P E+G   R +S  +  NP    AA SS T N++ TV  SN T G       L+ANNCCS
Sbjct: 119 PLESGCALRPDSSSIPMNPIVSAAAASSWT-NNVPTVSVSNQTTG------ALVANNCCS 171

Query: 356 STESTPRTQPIVEMNDQRSHGSSLRVLPDFAEVYSFIGSVFDPN 487
           S+ESTPRT+P+ +  ++ +HG S+RVLPDFA+VY FIGSVFDPN
Sbjct: 172 SSESTPRTKPVGKTAEKGNHGQSMRVLPDFAQVYGFIGSVFDPN 215


>ref|XP_002513646.1| DNA binding protein, putative [Ricinus communis]
           gi|223547554|gb|EEF49049.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 318

 Score =  149 bits (377), Expect = 2e-34
 Identities = 88/164 (53%), Positives = 103/164 (62%), Gaps = 2/164 (1%)
 Frame = +2

Query: 2   VIQIRSHAQKYFLKVEKSGSNEHLXXXXXXXXXXXXXXQKASKNAPVLSQ--VNATPSSS 175
           VIQIRSHAQKYFLKV+KSG+NEHL              QKASKNA +L Q  V+   SS+
Sbjct: 93  VIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKNAQMLLQPSVSFQSSSA 152

Query: 176 QPETGFIRRVESPPLLKNPAAGTAAVSSQTENSMQTVGTSNMTKGNIRSARQLLANNCCS 355
             E G+IRR +S  +  NP    AA S    N++  V  SN  KG I      + NNCCS
Sbjct: 153 LLEPGYIRRPDSSSMPTNPITSAAAAS--WTNNLPAVSFSNQAKGPI------VTNNCCS 204

Query: 356 STESTPRTQPIVEMNDQRSHGSSLRVLPDFAEVYSFIGSVFDPN 487
           STESTPRT+PI E  +  +H   LRVLPDF +VYSFIGSVFDPN
Sbjct: 205 STESTPRTKPIGETAELGNHSHPLRVLPDFVQVYSFIGSVFDPN 248


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