BLASTX nr result

ID: Bupleurum21_contig00013927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013927
         (1520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   759   0.0  
ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   758   0.0  
dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]                          753   0.0  
ref|XP_004171175.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   752   0.0  
ref|XP_002517619.1| dead box ATP-dependent RNA helicase, putativ...   750   0.0  

>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
            vinifera]
          Length = 428

 Score =  759 bits (1961), Expect = 0.0
 Identities = 378/391 (96%), Positives = 384/391 (98%)
 Frame = +1

Query: 1    KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 180
            KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK
Sbjct: 38   KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 97

Query: 181  TAVFVLSTLQQIEPVAGQVAALIMCHTRELAYQICHEFERFSTYLPGIKVAVFYGGVNIK 360
            TAVFVLSTLQQIEPV GQVAAL++CHTRELAYQICHEFERFSTYLP IKVAVFYGGVNIK
Sbjct: 98   TAVFVLSTLQQIEPVTGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 157

Query: 361  IHKDLLKNECPHIVVGTPGRILGLARDKELGLKNVRHFILDECDKMLESLDMRKDVQEIF 540
            IHKDLLKNECPHIVVGTPGRIL LARDK+L LKNVRHFILDECDKMLESLDMR+DVQEIF
Sbjct: 158  IHKDLLKNECPHIVVGTPGRILALARDKDLALKNVRHFILDECDKMLESLDMRRDVQEIF 217

Query: 541  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN 720
            KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN
Sbjct: 218  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN 277

Query: 721  RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLIECNFPSICIHSGMSQEERLTRYKNFKE 900
            RKLNDLLDALDFNQVVIFVKSVSRAAELNKLL+ECNFPSICIHSGM QEERLTRYK FKE
Sbjct: 278  RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMPQEERLTRYKGFKE 337

Query: 901  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITYVSSAS 1080
            GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT+VSSAS
Sbjct: 338  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 397

Query: 1081 DSDVLNQVQERFEVDIKMLPEQIDTSTYMPS 1173
            DSDVLNQVQERFEVDIK LPEQIDTSTYMPS
Sbjct: 398  DSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera]
            gi|297743441|emb|CBI36308.3| unnamed protein product
            [Vitis vinifera]
          Length = 428

 Score =  758 bits (1957), Expect = 0.0
 Identities = 377/391 (96%), Positives = 386/391 (98%)
 Frame = +1

Query: 1    KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 180
            KKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK
Sbjct: 38   KKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 97

Query: 181  TAVFVLSTLQQIEPVAGQVAALIMCHTRELAYQICHEFERFSTYLPGIKVAVFYGGVNIK 360
            TAVFVLSTLQQIEPVAGQVAAL++CHTRELAYQICHEFERFSTYLP IKVAVFYGGV+IK
Sbjct: 98   TAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIK 157

Query: 361  IHKDLLKNECPHIVVGTPGRILGLARDKELGLKNVRHFILDECDKMLESLDMRKDVQEIF 540
             HKDLLKNECPHIVVGTPGRIL LARDK+LGLK+VRHFILDECDKMLESLDMR+DVQEIF
Sbjct: 158  THKDLLKNECPHIVVGTPGRILALARDKDLGLKHVRHFILDECDKMLESLDMRRDVQEIF 217

Query: 541  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN 720
            KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN
Sbjct: 218  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN 277

Query: 721  RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLIECNFPSICIHSGMSQEERLTRYKNFKE 900
            RKLNDLLDALDFNQVVIFVKSVSRAAELNKLL+ECNFPSICIHSGM QEERLTRYKNFKE
Sbjct: 278  RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLMECNFPSICIHSGMPQEERLTRYKNFKE 337

Query: 901  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITYVSSAS 1080
            GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT+VSSAS
Sbjct: 338  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 397

Query: 1081 DSDVLNQVQERFEVDIKMLPEQIDTSTYMPS 1173
            DSDVLNQVQERFEVDIK LPEQIDTSTYMPS
Sbjct: 398  DSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]
          Length = 455

 Score =  753 bits (1945), Expect = 0.0
 Identities = 374/393 (95%), Positives = 386/393 (98%), Gaps = 2/393 (0%)
 Frame = +1

Query: 1    KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 180
            KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK
Sbjct: 38   KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 97

Query: 181  TAVFVLSTLQQIEPVAGQVAALIMCHTRELAYQICHEFERFSTYLPGIKVAVFYGGVNIK 360
            TAVFVLSTLQQIEPVAGQVAAL++CHTRELAYQICHEFERFSTYLP IKVAVFYGGVNIK
Sbjct: 98   TAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 157

Query: 361  IHKDLLKNECPHIVVGTPGRILGLARDKELGLKNVRHFILDECDKMLESLDMRKDVQEIF 540
            +HKD+LKNECPHIVVGTPGRIL LARDK+LGLKNVRHFILDECDKMLESLDMR+DVQEIF
Sbjct: 158  VHKDILKNECPHIVVGTPGRILALARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 217

Query: 541  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN 720
            KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E+EKN
Sbjct: 218  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTEMEKN 277

Query: 721  RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLIECNFPSICIHSGMSQEERLTRYKNFKE 900
            RKLNDLLDALDFNQVVIFVKSV+RAAELNKLL+ECNFPSICIHSGMSQEERLTRYK FKE
Sbjct: 278  RKLNDLLDALDFNQVVIFVKSVNRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKE 337

Query: 901  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITYVSSAS 1080
            GHKRILVATDLVGRGIDIERVNIV+NYDMPDSADTYLHRVGRAGRFGTKGLAIT+VSSAS
Sbjct: 338  GHKRILVATDLVGRGIDIERVNIVVNYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 397

Query: 1081 DSDVLNQVQERFEVDIKMLPEQIDTSTY--MPS 1173
            DSDVLNQVQ RFEVDIK LPEQIDTSTY  MPS
Sbjct: 398  DSDVLNQVQARFEVDIKELPEQIDTSTYSKMPS 430


>ref|XP_004171175.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Cucumis
            sativus]
          Length = 427

 Score =  752 bits (1941), Expect = 0.0
 Identities = 371/391 (94%), Positives = 385/391 (98%)
 Frame = +1

Query: 1    KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 180
            KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK
Sbjct: 37   KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96

Query: 181  TAVFVLSTLQQIEPVAGQVAALIMCHTRELAYQICHEFERFSTYLPGIKVAVFYGGVNIK 360
            TAVFVLSTLQQI+PVAGQV+AL++CHTRELAYQICHEFERFSTYLP +KVAVFYGGVNIK
Sbjct: 97   TAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIK 156

Query: 361  IHKDLLKNECPHIVVGTPGRILGLARDKELGLKNVRHFILDECDKMLESLDMRKDVQEIF 540
            IHKDLLKNECPHIVVGTPGRIL L+RDK+L LKNVRHFILDECDKMLESLDMR+DVQEIF
Sbjct: 157  IHKDLLKNECPHIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216

Query: 541  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN 720
            KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKN
Sbjct: 217  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKN 276

Query: 721  RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLIECNFPSICIHSGMSQEERLTRYKNFKE 900
            RKLNDLLDALDFNQVVIFVKSV+RAAEL+KLL+ECNFPSICIHSGMSQEERLTRYK FKE
Sbjct: 277  RKLNDLLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKE 336

Query: 901  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITYVSSAS 1080
            GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT+VSSA+
Sbjct: 337  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAA 396

Query: 1081 DSDVLNQVQERFEVDIKMLPEQIDTSTYMPS 1173
            DSDVLN VQERFEVDIK LPEQIDTSTYMPS
Sbjct: 397  DSDVLNNVQERFEVDIKELPEQIDTSTYMPS 427


>ref|XP_002517619.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223543251|gb|EEF44783.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 427

 Score =  750 bits (1937), Expect = 0.0
 Identities = 371/391 (94%), Positives = 385/391 (98%)
 Frame = +1

Query: 1    KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 180
            KKGYVGIHSSGFRDFLLKPELLRAI+DSGFEHPSEVQHECIPQAILGM VICQAKSGMGK
Sbjct: 37   KKGYVGIHSSGFRDFLLKPELLRAIIDSGFEHPSEVQHECIPQAILGMHVICQAKSGMGK 96

Query: 181  TAVFVLSTLQQIEPVAGQVAALIMCHTRELAYQICHEFERFSTYLPGIKVAVFYGGVNIK 360
            TAVFVLSTLQQI+PVAGQVAAL++CHTRELAYQICHEFERFSTYLP +KV+VFYGGVNIK
Sbjct: 97   TAVFVLSTLQQIDPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDLKVSVFYGGVNIK 156

Query: 361  IHKDLLKNECPHIVVGTPGRILGLARDKELGLKNVRHFILDECDKMLESLDMRKDVQEIF 540
            IHKDLLKNECPH+VVGTPGRIL LARDK+LGLKNVRHFILDECDKMLESLDMR+DVQEIF
Sbjct: 157  IHKDLLKNECPHVVVGTPGRILALARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 216

Query: 541  KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN 720
            KMTP+DKQVMMFSATLSKEIRPVCKKFMQ PMEIYVDDEAKLTLHGLVQHYIKL+ELEKN
Sbjct: 217  KMTPYDKQVMMFSATLSKEIRPVCKKFMQAPMEIYVDDEAKLTLHGLVQHYIKLTELEKN 276

Query: 721  RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLIECNFPSICIHSGMSQEERLTRYKNFKE 900
            RKLNDLLDALDFNQVVIFVKSVSRAAELNKLL+ECNFPSICIHSGMSQEERLT+YKNFKE
Sbjct: 277  RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLMECNFPSICIHSGMSQEERLTKYKNFKE 336

Query: 901  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITYVSSAS 1080
            GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT+VSSAS
Sbjct: 337  GHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 396

Query: 1081 DSDVLNQVQERFEVDIKMLPEQIDTSTYMPS 1173
            DSDVLNQVQ RFEVDIK LPEQIDTSTYMPS
Sbjct: 397  DSDVLNQVQARFEVDIKELPEQIDTSTYMPS 427


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