BLASTX nr result

ID: Bupleurum21_contig00013921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013921
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39149.3| unnamed protein product [Vitis vinifera]              427   e-117
ref|XP_002267641.1| PREDICTED: 2,3-dimethylmalate lyase [Vitis v...   427   e-117
ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|2...   422   e-116
gb|ABN08672.1| Isocitrate lyase and phosphorylmutase [Medicago t...   408   e-111
ref|XP_003532329.1| PREDICTED: 2,3-dimethylmalate lyase-like [Gl...   402   e-109

>emb|CBI39149.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  427 bits (1098), Expect = e-117
 Identities = 221/331 (66%), Positives = 256/331 (77%)
 Frame = -1

Query: 1242 GRRVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAISLDESIWRSKAFADAGADVL 1063
            GR+VVSREEAVMRIKAA+DARKE+GSDIVIVARTDSRQA+S DES+WRS+AFA AGADVL
Sbjct: 152  GRKVVSREEAVMRIKAAIDARKETGSDIVIVARTDSRQAVSFDESLWRSRAFASAGADVL 211

Query: 1062 FVDALTSKEEMERFCEISPLVPKMANMLEGGGKTPILNPIELEDIGYKLVAYPLSLMGVS 883
            F+DAL+S+EEM+ FCEI+P VPKMANMLEGGGKTPILNPIELED+GYK+V YPLSL+GVS
Sbjct: 212  FIDALSSREEMKAFCEIAPFVPKMANMLEGGGKTPILNPIELEDVGYKIVVYPLSLIGVS 271

Query: 882  IRAMQDALAAIKGGRIPTPGSMPSFEELQEILGFNSYYEEEKRYITKESEFSSQGARSKP 703
            IRAMQDAL AIKGGRIP+PGSMP+FEE++E LGFNSYYEEEKRY T + + S Q A S  
Sbjct: 272  IRAMQDALRAIKGGRIPSPGSMPTFEEIKETLGFNSYYEEEKRYATSKGQVSWQRASSNT 331

Query: 702  YIIREKAEDDKQQRNQSSQEPVVEVLTPEVYSNTSPGGSGDPFSGIWSRKLRVKIVGRDG 523
            Y  +++A+DD QQR Q+SQ+PVVEVLTP+ Y    P GS  PF+GIWSR LR+KI GRDG
Sbjct: 332  YSSQQRAQDDTQQRGQNSQDPVVEVLTPDAY--YGPDGSKVPFAGIWSRTLRIKITGRDG 389

Query: 522  SEKLDIRIPAGFLDGITNIVPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
             +KLD+RIPAGFL+GITNIVPALGG                                   
Sbjct: 390  IDKLDVRIPAGFLEGITNIVPALGG-------------------------------VNIK 418

Query: 342  XXXXXXALEIGGKLLLDFTDSRGDRIQVFLE 250
                  A E+GGKLL+DF D+ GDRIQVFLE
Sbjct: 419  ELLDDAAEELGGKLLIDFNDAMGDRIQVFLE 449


>ref|XP_002267641.1| PREDICTED: 2,3-dimethylmalate lyase [Vitis vinifera]
          Length = 505

 Score =  427 bits (1098), Expect = e-117
 Identities = 221/331 (66%), Positives = 256/331 (77%)
 Frame = -1

Query: 1242 GRRVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAISLDESIWRSKAFADAGADVL 1063
            GR+VVSREEAVMRIKAA+DARKE+GSDIVIVARTDSRQA+S DES+WRS+AFA AGADVL
Sbjct: 208  GRKVVSREEAVMRIKAAIDARKETGSDIVIVARTDSRQAVSFDESLWRSRAFASAGADVL 267

Query: 1062 FVDALTSKEEMERFCEISPLVPKMANMLEGGGKTPILNPIELEDIGYKLVAYPLSLMGVS 883
            F+DAL+S+EEM+ FCEI+P VPKMANMLEGGGKTPILNPIELED+GYK+V YPLSL+GVS
Sbjct: 268  FIDALSSREEMKAFCEIAPFVPKMANMLEGGGKTPILNPIELEDVGYKIVVYPLSLIGVS 327

Query: 882  IRAMQDALAAIKGGRIPTPGSMPSFEELQEILGFNSYYEEEKRYITKESEFSSQGARSKP 703
            IRAMQDAL AIKGGRIP+PGSMP+FEE++E LGFNSYYEEEKRY T + + S Q A S  
Sbjct: 328  IRAMQDALRAIKGGRIPSPGSMPTFEEIKETLGFNSYYEEEKRYATSKGQVSWQRASSNT 387

Query: 702  YIIREKAEDDKQQRNQSSQEPVVEVLTPEVYSNTSPGGSGDPFSGIWSRKLRVKIVGRDG 523
            Y  +++A+DD QQR Q+SQ+PVVEVLTP+ Y    P GS  PF+GIWSR LR+KI GRDG
Sbjct: 388  YSSQQRAQDDTQQRGQNSQDPVVEVLTPDAY--YGPDGSKVPFAGIWSRTLRIKITGRDG 445

Query: 522  SEKLDIRIPAGFLDGITNIVPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
             +KLD+RIPAGFL+GITNIVPALGG                                   
Sbjct: 446  IDKLDVRIPAGFLEGITNIVPALGG-------------------------------VNIK 474

Query: 342  XXXXXXALEIGGKLLLDFTDSRGDRIQVFLE 250
                  A E+GGKLL+DF D+ GDRIQVFLE
Sbjct: 475  ELLDDAAEELGGKLLIDFNDAMGDRIQVFLE 505


>ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|222843360|gb|EEE80907.1|
            predicted protein [Populus trichocarpa]
          Length = 504

 Score =  422 bits (1086), Expect = e-116
 Identities = 220/331 (66%), Positives = 253/331 (76%)
 Frame = -1

Query: 1242 GRRVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAISLDESIWRSKAFADAGADVL 1063
            GR+VVSREEA+MRIKAAVDAR+E+GSDIVIV+RTDSRQA+SLDES+WRS+AFADAGADVL
Sbjct: 205  GRKVVSREEAIMRIKAAVDAREETGSDIVIVSRTDSRQAVSLDESLWRSRAFADAGADVL 264

Query: 1062 FVDALTSKEEMERFCEISPLVPKMANMLEGGGKTPILNPIELEDIGYKLVAYPLSLMGVS 883
            F+DAL S+EEM+ FCEISPLVPKMANMLEGGGKTPI+ P ELE++GYKLVAYPLSL+GVS
Sbjct: 265  FIDALASREEMKSFCEISPLVPKMANMLEGGGKTPIVTPFELEEVGYKLVAYPLSLIGVS 324

Query: 882  IRAMQDALAAIKGGRIPTPGSMPSFEELQEILGFNSYYEEEKRYITKESEFSSQGARSKP 703
            IRAMQD+LAAIKGGRIP PGSMPSFEE+++ILGFN+YYEEEK+Y    S+ + Q A S  
Sbjct: 325  IRAMQDSLAAIKGGRIPPPGSMPSFEEIKDILGFNTYYEEEKQYAISSSQMARQRASSNV 384

Query: 702  YIIREKAEDDKQQRNQSSQEPVVEVLTPEVYSNTSPGGSGDPFSGIWSRKLRVKIVGRDG 523
            Y I+ +  D  +QR+QS Q+PVVEV+TPEVY       S  PFSGIWSR LRVKI GRDG
Sbjct: 385  YGIQRRTPDYTEQRSQSPQDPVVEVITPEVYGGYGADNSRGPFSGIWSRTLRVKITGRDG 444

Query: 522  SEKLDIRIPAGFLDGITNIVPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
             EKLD+RIPAGFL+GITNIVPALGG                                   
Sbjct: 445  FEKLDVRIPAGFLEGITNIVPALGG-------------------------------VNIK 473

Query: 342  XXXXXXALEIGGKLLLDFTDSRGDRIQVFLE 250
                  A E+GGKLLLDF D+ GDRIQVFLE
Sbjct: 474  GLLDDAAEEVGGKLLLDFNDTVGDRIQVFLE 504


>gb|ABN08672.1| Isocitrate lyase and phosphorylmutase [Medicago truncatula]
          Length = 478

 Score =  408 bits (1049), Expect = e-111
 Identities = 212/331 (64%), Positives = 250/331 (75%)
 Frame = -1

Query: 1242 GRRVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAISLDESIWRSKAFADAGADVL 1063
            GR+VVSREEAVMRIKAAVDAR ESGSDIVIVARTD+RQA+SLDE+++RS+AFADAGADV+
Sbjct: 180  GRKVVSREEAVMRIKAAVDARNESGSDIVIVARTDARQALSLDEALYRSRAFADAGADVV 239

Query: 1062 FVDALTSKEEMERFCEISPLVPKMANMLEGGGKTPILNPIELEDIGYKLVAYPLSLMGVS 883
            F+DAL S++EME FC++SPLVPKMANMLEGGGKTPIL P+ELEDIGYK+VAYPLSL+GVS
Sbjct: 240  FIDALASRQEMEAFCQVSPLVPKMANMLEGGGKTPILTPLELEDIGYKIVAYPLSLIGVS 299

Query: 882  IRAMQDALAAIKGGRIPTPGSMPSFEELQEILGFNSYYEEEKRYITKESEFSSQGARSKP 703
            IRAMQDAL AIKGGRIP PGSMP+FEE+++ LGFN+YYEEEKRY T   +  S+   S  
Sbjct: 300  IRAMQDALTAIKGGRIPPPGSMPTFEEIKDTLGFNAYYEEEKRYATSTDQLLSKRESSSV 359

Query: 702  YIIREKAEDDKQQRNQSSQEPVVEVLTPEVYSNTSPGGSGDPFSGIWSRKLRVKIVGRDG 523
            Y I+++ + D +Q +Q+ ++P+VEV+TP+VY+     GS DPFSGIWSR LR+KI GRDG
Sbjct: 360  YSIQQREQVDTEQTSQTIEDPIVEVITPDVYNKYGADGSRDPFSGIWSRTLRIKITGRDG 419

Query: 522  SEKLDIRIPAGFLDGITNIVPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
             EKLD+RIPAGFLDGITN VPALGG                                   
Sbjct: 420  VEKLDLRIPAGFLDGITNTVPALGGVNLKKLLDDATD----------------------- 456

Query: 342  XXXXXXALEIGGKLLLDFTDSRGDRIQVFLE 250
                    EIGGK LLDF D  GDRIQVFLE
Sbjct: 457  --------EIGGK-LLDFNDRMGDRIQVFLE 478


>ref|XP_003532329.1| PREDICTED: 2,3-dimethylmalate lyase-like [Glycine max]
          Length = 466

 Score =  402 bits (1032), Expect = e-109
 Identities = 211/332 (63%), Positives = 252/332 (75%), Gaps = 1/332 (0%)
 Frame = -1

Query: 1242 GRRVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQAISLDESIWRSKAFADAGADVL 1063
            GRRVVSREEAVM+IKAAVDAR+ESGSDIVIVAR+D+RQA+SL+E++ RS+AFADAGADVL
Sbjct: 166  GRRVVSREEAVMKIKAAVDARRESGSDIVIVARSDARQAVSLEEALVRSRAFADAGADVL 225

Query: 1062 FVDALTSKEEMERFCEISPLVPKMANMLEGGGKTPILNPIELEDIGYKLVAYPLSLMGVS 883
            F+DAL S+EEM+ FC++SPLVPKMANMLEGGGKTPILNP+EL+DIG+K+VAYPLSL+GVS
Sbjct: 226  FIDALASREEMKAFCDVSPLVPKMANMLEGGGKTPILNPMELQDIGFKIVAYPLSLIGVS 285

Query: 882  IRAMQDALAAIKGGRIPTPGSMPSFEELQEILGFNSYYEEEKRYITKESEFSSQGARSKP 703
            IRAMQD+L AI+GGRIP PGSMPSFEE+++ILGFN+YYEEEKRY T  +   S+   S  
Sbjct: 286  IRAMQDSLTAIRGGRIPPPGSMPSFEEIKDILGFNAYYEEEKRYATTTNPQLSKRESSNL 345

Query: 702  YIIREKAEDDKQQRNQSSQEPVVEVLTP-EVYSNTSPGGSGDPFSGIWSRKLRVKIVGRD 526
            Y I+ + + D +Q NQS ++P+VEV+TP +VY+      S +PFSGIWSR LRVKI GRD
Sbjct: 346  YSIQRRDQVDTEQTNQSFKDPIVEVITPDDVYNKYGADSSRNPFSGIWSRTLRVKITGRD 405

Query: 525  GSEKLDIRIPAGFLDGITNIVPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
            G E+LD+RIPAGFLDGITNIVPALGG                                  
Sbjct: 406  GFERLDLRIPAGFLDGITNIVPALGGINIKELLDDATE---------------------- 443

Query: 345  XXXXXXXALEIGGKLLLDFTDSRGDRIQVFLE 250
                     E+GGKLLLDF D  GDRIQVFLE
Sbjct: 444  ---------EVGGKLLLDFQDRMGDRIQVFLE 466


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