BLASTX nr result

ID: Bupleurum21_contig00013904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013904
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   244   7e-63
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             243   2e-62
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         242   3e-62
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         242   3e-62
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   242   3e-62

>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  244 bits (622), Expect = 7e-63
 Identities = 117/147 (79%), Positives = 131/147 (89%)
 Frame = -1

Query: 462  HKAIGVKWVYKVKRNAQGKVEKNKARLVVKGYSQKHGIDYDEVFAPVARLETIRLIISLA 283
            HKAIGVKWVYK K+N++G+VE+ KARLV KGYSQ+ GIDYDEVFAPVARLET+RLIISLA
Sbjct: 844  HKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLA 903

Query: 282  AQYKWNISQMDFKSAFLNGPLEEEVYIQQPQGYVVKGHEDKVLRLKKALYGLKQAPRAWY 103
            AQ KW I QMD KSAFLNG LEEEVYI+QPQGY+VKG EDKVLRLKKALYGLKQAPRAW 
Sbjct: 904  AQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWN 963

Query: 102  SRIDKFFRDHGFIKCPNEHALYVKKDK 22
            +RIDK+F++  FIKCP EHALY+K  K
Sbjct: 964  TRIDKYFKEKDFIKCPYEHALYIKIQK 990


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  243 bits (619), Expect = 2e-62
 Identities = 116/147 (78%), Positives = 130/147 (88%)
 Frame = -1

Query: 462  HKAIGVKWVYKVKRNAQGKVEKNKARLVVKGYSQKHGIDYDEVFAPVARLETIRLIISLA 283
            HKAIGVKWVYK K+N++G+VE+ KARLV KGYSQ+ GIDYDEVFAPVARLET+RLIISLA
Sbjct: 815  HKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLA 874

Query: 282  AQYKWNISQMDFKSAFLNGPLEEEVYIQQPQGYVVKGHEDKVLRLKKALYGLKQAPRAWY 103
            AQ KW I QMDFK AFLNG  EEEVYI+QPQGY+VKG EDKVLRLKKALYGLKQAPRAW 
Sbjct: 875  AQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWN 934

Query: 102  SRIDKFFRDHGFIKCPNEHALYVKKDK 22
            +RIDK+F++  FIKCP EHALY+K  K
Sbjct: 935  TRIDKYFKEKDFIKCPYEHALYIKIQK 961


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  242 bits (617), Expect = 3e-62
 Identities = 115/147 (78%), Positives = 130/147 (88%)
 Frame = -1

Query: 462 HKAIGVKWVYKVKRNAQGKVEKNKARLVVKGYSQKHGIDYDEVFAPVARLETIRLIISLA 283
           HKAIGVKWVYK K+N++G+VE+ KARLV KGYSQ+ GIDYDE+FAPVARLET+RLIISLA
Sbjct: 373 HKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLA 432

Query: 282 AQYKWNISQMDFKSAFLNGPLEEEVYIQQPQGYVVKGHEDKVLRLKKALYGLKQAPRAWY 103
           AQ KW I QMD KSAFLNG LEEEVYI+QPQGY+VKG EDKVLRLKK LYGLKQAPRAW 
Sbjct: 433 AQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWN 492

Query: 102 SRIDKFFRDHGFIKCPNEHALYVKKDK 22
           +RIDK+F++  FIKCP EHALY+K  K
Sbjct: 493 TRIDKYFKEKDFIKCPYEHALYIKIQK 519


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  242 bits (617), Expect = 3e-62
 Identities = 116/147 (78%), Positives = 130/147 (88%)
 Frame = -1

Query: 462  HKAIGVKWVYKVKRNAQGKVEKNKARLVVKGYSQKHGIDYDEVFAPVARLETIRLIISLA 283
            HKAIGVKWVYK K+N++G+VE+ KARLV KGYSQ+ GIDYDEVFAPVARLET+RLIISLA
Sbjct: 876  HKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLA 935

Query: 282  AQYKWNISQMDFKSAFLNGPLEEEVYIQQPQGYVVKGHEDKVLRLKKALYGLKQAPRAWY 103
            AQ KW I QMD KSAFLNG LEEEVYI+QPQGY+VKG EDKVLRLKK LYGLKQAPRAW 
Sbjct: 936  AQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWN 995

Query: 102  SRIDKFFRDHGFIKCPNEHALYVKKDK 22
            +RIDK+F++  FIKCP EHALY+K  K
Sbjct: 996  TRIDKYFKEKDFIKCPYEHALYIKIQK 1022


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  242 bits (617), Expect = 3e-62
 Identities = 115/147 (78%), Positives = 130/147 (88%)
 Frame = -1

Query: 462  HKAIGVKWVYKVKRNAQGKVEKNKARLVVKGYSQKHGIDYDEVFAPVARLETIRLIISLA 283
            HKAIGVKWVYK K+N++G+VE+ KARLV KGYSQ+ GIDYDE+FAPVARLET+RLIISLA
Sbjct: 876  HKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLA 935

Query: 282  AQYKWNISQMDFKSAFLNGPLEEEVYIQQPQGYVVKGHEDKVLRLKKALYGLKQAPRAWY 103
            AQ KW I QMD KSAFLNG LEEEVYI+QPQGY+VKG EDKVLRLKK LYGLKQAPRAW 
Sbjct: 936  AQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWN 995

Query: 102  SRIDKFFRDHGFIKCPNEHALYVKKDK 22
            +RIDK+F++  FIKCP EHALY+K  K
Sbjct: 996  TRIDKYFKEKDFIKCPYEHALYIKIQK 1022


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