BLASTX nr result

ID: Bupleurum21_contig00013902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013902
         (1497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634665.1| PREDICTED: tubby-like F-box protein 7-like i...   577   e-162
ref|XP_003634666.1| PREDICTED: tubby-like F-box protein 7-like i...   570   e-160
gb|ADL36844.1| TLP domain class transcription factor [Malus x do...   569   e-160
ref|XP_003540491.1| PREDICTED: tubby-like F-box protein 7-like [...   565   e-158
ref|XP_002331802.1| predicted protein [Populus trichocarpa] gi|2...   563   e-158

>ref|XP_003634665.1| PREDICTED: tubby-like F-box protein 7-like isoform 1 [Vitis vinifera]
          Length = 401

 Score =  577 bits (1488), Expect = e-162
 Identities = 292/404 (72%), Positives = 320/404 (79%), Gaps = 15/404 (3%)
 Frame = -3

Query: 1459 RKSFLSRRITGRSFSFTISKSLREFRFSQPVHS---------------SNXXXXXXXXXX 1325
            R+S LSRR      +F +SKS +EFR      S               S+          
Sbjct: 4    RRSILSRR------TFALSKSFKEFRTLDSSESRSEPALRPRIVDDDVSDEEEEDSGDGA 57

Query: 1324 XDSSEIADPASSNGVSWSTMLPELLGEIIRRVEASEDRWPQRRNVVVCGCVCKRWRDVTK 1145
               S I    S  G SWSTMLPELLGEII+RVEASE+RWP RRNVV C CVCKRWRD+T+
Sbjct: 58   AGDSGIRRVDSGRGDSWSTMLPELLGEIIQRVEASENRWPTRRNVVSCACVCKRWRDITR 117

Query: 1144 DIVRSPYESGKITFPSCLTQPAPRELPLQCLIKRNKKNGTFYLSLALTPSFTDKGKFLLA 965
            ++VRS  +SG+ITFPSCL QP PR    QCLIKRNKKN TFYL LAL+ SFTDKGKFLLA
Sbjct: 118  EVVRSRLDSGQITFPSCLKQPGPRNSEHQCLIKRNKKNSTFYLYLALSSSFTDKGKFLLA 177

Query: 964  ARRYRHGANTEYIISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSKPPHTGAKPSSSRS 785
            ARRYRHGA+TEYIISLDADD+SQGSNAYVGKL SDFLGTNF IYDS+PPH+GAKPSSSR+
Sbjct: 178  ARRYRHGAHTEYIISLDADDISQGSNAYVGKLRSDFLGTNFAIYDSQPPHSGAKPSSSRA 237

Query: 784  GRRFASKQISPQVPAGNFEVGQISYKFNLLKSRGPRRMICSLNCPCSDGTTAQRPEDDYR 605
            GRRFASKQISPQVPAGNFEVGQ+SYKFNLLKSRGPRRM+CSL CP S  T   +  D+  
Sbjct: 238  GRRFASKQISPQVPAGNFEVGQVSYKFNLLKSRGPRRMVCSLRCPSSGETANNKSPDNSD 297

Query: 604  MKKPDSATFGQTALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATLDQSQPGGKGD 425
            +KKPD A  G + L+NKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAT+DQSQPGGKGD
Sbjct: 298  LKKPDPAAPGCSILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGD 357

Query: 424  EETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 293
            EETVLLQFGKVG+DTFTMDYRQPLSAF AFAICLTSFGTKLACE
Sbjct: 358  EETVLLQFGKVGNDTFTMDYRQPLSAFLAFAICLTSFGTKLACE 401


>ref|XP_003634666.1| PREDICTED: tubby-like F-box protein 7-like isoform 2 [Vitis vinifera]
          Length = 406

 Score =  570 bits (1469), Expect = e-160
 Identities = 291/409 (71%), Positives = 320/409 (78%), Gaps = 20/409 (4%)
 Frame = -3

Query: 1459 RKSFLSRRITGRSFSFTISKSLREFRFSQPVHS---------------SNXXXXXXXXXX 1325
            R+S LSRR      +F +SKS +EFR      S               S+          
Sbjct: 4    RRSILSRR------TFALSKSFKEFRTLDSSESRSEPALRPRIVDDDVSDEEEEDSGDGA 57

Query: 1324 XDSSEIADPASSNGVSWSTMLPELLGEIIRRVEASEDRWPQRRNVVVCGCVCKRWRDVTK 1145
               S I    S  G SWSTMLPELLGEII+RVEASE+RWP RRNVV C CVCKRWRD+T+
Sbjct: 58   AGDSGIRRVDSGRGDSWSTMLPELLGEIIQRVEASENRWPTRRNVVSCACVCKRWRDITR 117

Query: 1144 DIVRSPYESGKITFPSCLTQPAPRELPLQCLIKRNKKNGTFYLSLALTP-----SFTDKG 980
            ++VRS  +SG+ITFPSCL QP PR    QCLIKRNKKN TFYL LAL+      +FTDKG
Sbjct: 118  EVVRSRLDSGQITFPSCLKQPGPRNSEHQCLIKRNKKNSTFYLYLALSSVLFPSAFTDKG 177

Query: 979  KFLLAARRYRHGANTEYIISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSKPPHTGAKP 800
            KFLLAARRYRHGA+TEYIISLDADD+SQGSNAYVGKL SDFLGTNF IYDS+PPH+GAKP
Sbjct: 178  KFLLAARRYRHGAHTEYIISLDADDISQGSNAYVGKLRSDFLGTNFAIYDSQPPHSGAKP 237

Query: 799  SSSRSGRRFASKQISPQVPAGNFEVGQISYKFNLLKSRGPRRMICSLNCPCSDGTTAQRP 620
            SSSR+GRRFASKQISPQVPAGNFEVGQ+SYKFNLLKSRGPRRM+CSL CP S  T   + 
Sbjct: 238  SSSRAGRRFASKQISPQVPAGNFEVGQVSYKFNLLKSRGPRRMVCSLRCPSSGETANNKS 297

Query: 619  EDDYRMKKPDSATFGQTALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATLDQSQP 440
             D+  +KKPD A  G + L+NKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAT+DQSQP
Sbjct: 298  PDNSDLKKPDPAAPGCSILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQP 357

Query: 439  GGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 293
            GGKGDEETVLLQFGKVG+DTFTMDYRQPLSAF AFAICLTSFGTKLACE
Sbjct: 358  GGKGDEETVLLQFGKVGNDTFTMDYRQPLSAFLAFAICLTSFGTKLACE 406


>gb|ADL36844.1| TLP domain class transcription factor [Malus x domestica]
          Length = 378

 Score =  569 bits (1467), Expect = e-160
 Identities = 289/390 (74%), Positives = 313/390 (80%), Gaps = 1/390 (0%)
 Frame = -3

Query: 1459 RKSFLSRRITGRSFSFTISKSLREFRFSQPVHSSNXXXXXXXXXXXDSSEIADPASS-NG 1283
            RK+F SR+          SKS RE + S    +               S+ AD +SS + 
Sbjct: 4    RKAFRSRKF---------SKSFRELKLSDEDQARGGDRRVVR-----DSDCADSSSSTSS 49

Query: 1282 VSWSTMLPELLGEIIRRVEASEDRWPQRRNVVVCGCVCKRWRDVTKDIVRSPYESGKITF 1103
             SWS MLPELLGEIIRRVEASED+WP R+NVV C CVCKRWRD+TK+I RSP  SGKITF
Sbjct: 50   SSWSDMLPELLGEIIRRVEASEDKWPHRKNVVACACVCKRWRDITKEIARSPSYSGKITF 109

Query: 1102 PSCLTQPAPRELPLQCLIKRNKKNGTFYLSLALTPSFTDKGKFLLAARRYRHGANTEYII 923
            PSCL QP PR+ P QCLIKRNKK  TFYL LALT SFTDKGKFLLAARRYRHG N EYII
Sbjct: 110  PSCLKQPGPRDFPHQCLIKRNKKTSTFYLYLALTSSFTDKGKFLLAARRYRHGTNYEYII 169

Query: 922  SLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSKPPHTGAKPSSSRSGRRFASKQISPQVP 743
            SLDADD+SQGSNAYVGKLSSDFLGTNFTIYDS+PPH+GAKP+SSRS RRFASKQISPQVP
Sbjct: 170  SLDADDISQGSNAYVGKLSSDFLGTNFTIYDSQPPHSGAKPASSRSTRRFASKQISPQVP 229

Query: 742  AGNFEVGQISYKFNLLKSRGPRRMICSLNCPCSDGTTAQRPEDDYRMKKPDSATFGQTAL 563
            AGNFEVGQ+SYKFNLLKSRGPRRMIC L CP SD T   +P D+ ++KK    + G T L
Sbjct: 230  AGNFEVGQVSYKFNLLKSRGPRRMICPLICPPSDETAIGKPLDNLKLKKTACTSSGYTFL 289

Query: 562  RNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATLDQSQPGGKGDEETVLLQFGKVGDD 383
            RNKAPRWH+ LQCWCLNFHGRVTVASVKNFQLVA +D SQPGGKGDEET  LQFGKVGDD
Sbjct: 290  RNKAPRWHDQLQCWCLNFHGRVTVASVKNFQLVAAVDPSQPGGKGDEETA-LQFGKVGDD 348

Query: 382  TFTMDYRQPLSAFQAFAICLTSFGTKLACE 293
            TFTMDYRQPLSAFQAFAICLTSFGTKLACE
Sbjct: 349  TFTMDYRQPLSAFQAFAICLTSFGTKLACE 378


>ref|XP_003540491.1| PREDICTED: tubby-like F-box protein 7-like [Glycine max]
          Length = 378

 Score =  565 bits (1455), Expect = e-158
 Identities = 267/344 (77%), Positives = 301/344 (87%), Gaps = 5/344 (1%)
 Frame = -3

Query: 1309 IADPASSNGVSWSTMLPELLGEIIRRVEASEDRWPQRRNVVVCGCVCKRWRDVTKDIVRS 1130
            + + A+ N   WS+MLPE+LGEI+RRV+A+E++WP R+NVV C CVCKRWRD+T+++VR 
Sbjct: 35   VEEAANGNNNGWSSMLPEILGEIVRRVDAAEEQWPNRQNVVACACVCKRWRDITREVVRV 94

Query: 1129 PYESGKITFPSCLTQPAPRELPLQCLIKRNKKNGTFYLSLALTPSFTDKGKFLLAARRYR 950
            P  +GKITFPSCL QP PR++P QCLIKRN+K  TFYL LALTPSFTDKGKFLLAARRYR
Sbjct: 95   PSHTGKITFPSCLKQPGPRDVPHQCLIKRNQKTSTFYLYLALTPSFTDKGKFLLAARRYR 154

Query: 949  HGANTEYIISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSKPPHTGAKPSSSRSGRRFA 770
             G +TEYIISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDS+PPH+GAKPSS R+ RRFA
Sbjct: 155  CGTHTEYIISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHSGAKPSSGRASRRFA 214

Query: 769  SKQISPQVPAGNFEVGQISYKFNLLKSRGPRRMICSLNCPC-----SDGTTAQRPEDDYR 605
            SKQISPQVPAGNFEVGQ+SYKFNLLKSRGPRRM+CSL CP      + G++   P + ++
Sbjct: 215  SKQISPQVPAGNFEVGQVSYKFNLLKSRGPRRMVCSLKCPVTPVSPTSGSSDSTPVNGHK 274

Query: 604  MKKPDSATFGQTALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATLDQSQPGGKGD 425
            M   + A  G T L+NKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAT+DQSQPGGKGD
Sbjct: 275  MHDKEQAASGYTILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGD 334

Query: 424  EETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 293
            EETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE
Sbjct: 335  EETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 378


>ref|XP_002331802.1| predicted protein [Populus trichocarpa] gi|222874498|gb|EEF11629.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  563 bits (1450), Expect = e-158
 Identities = 275/332 (82%), Positives = 295/332 (88%), Gaps = 7/332 (2%)
 Frame = -3

Query: 1267 MLPELLGEIIRRVEASEDRWPQRRNVVVCGCVCKRWRDVTKDIVRS-------PYESGKI 1109
            MLPELLGEII+RVE SEDRWPQR+NVV C CVCK+WR+VTKDIV+S          SGKI
Sbjct: 1    MLPELLGEIIKRVEESEDRWPQRQNVVACACVCKKWREVTKDIVKSLPNNNNNNGSSGKI 60

Query: 1108 TFPSCLTQPAPRELPLQCLIKRNKKNGTFYLSLALTPSFTDKGKFLLAARRYRHGANTEY 929
            TFPSCL QP PR+LP QCLIKRNKK  TFYL LALTPSFTDKGKFLLAARRYR G +TEY
Sbjct: 61   TFPSCLKQPGPRDLPHQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRYRQGVHTEY 120

Query: 928  IISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSKPPHTGAKPSSSRSGRRFASKQISPQ 749
            IISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDS+PPH+GAKPSSSR+ RRFASKQISPQ
Sbjct: 121  IISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHSGAKPSSSRASRRFASKQISPQ 180

Query: 748  VPAGNFEVGQISYKFNLLKSRGPRRMICSLNCPCSDGTTAQRPEDDYRMKKPDSATFGQT 569
            VPAGNFEVGQ+SYKFNLLKSRGPRRM+CSL CP S  TT  +  D+ +M + +SA+ G T
Sbjct: 181  VPAGNFEVGQVSYKFNLLKSRGPRRMVCSLKCPVSQETTNVKNVDNSKMTQLESASSGFT 240

Query: 568  ALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATLDQSQPGGKGDEETVLLQFGKVG 389
             LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA +DQSQPGGKGDEETVLLQFGKVG
Sbjct: 241  VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAIMDQSQPGGKGDEETVLLQFGKVG 300

Query: 388  DDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 293
            DDTFTMDYRQPLSAFQAFA+CLTSFGTKLACE
Sbjct: 301  DDTFTMDYRQPLSAFQAFALCLTSFGTKLACE 332


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