BLASTX nr result

ID: Bupleurum21_contig00013860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013860
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation...   311   4e-83
ref|XP_002526864.1| eukaryotic translation initiation factor 3f,...   307   5e-82
ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation...   305   3e-81
ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|1...   304   6e-81
ref|XP_003538452.1| PREDICTED: eukaryotic translation initiation...   302   2e-80

>ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Cucumis sativus]
           gi|449517876|ref|XP_004165970.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit F-like [Cucumis
           sativus]
          Length = 285

 Score =  311 bits (797), Expect = 4e-83
 Identities = 149/173 (86%), Positives = 163/173 (94%)
 Frame = -3

Query: 521 RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKE 342
           RPDQA+RVIGTLLGSVLPDGTVDIRNSYAVPHNE  DQVALDIDYHHNML+SHQKVNPKE
Sbjct: 37  RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKE 96

Query: 341 VLVGWFSTGFGVTGGSALIHEFYSRETTNPVHLTVDTGFTNGDATIKGFVSVNLSLGDHQ 162
           V+VGW+STG GVTGGSALIHEFYSRE  NP+HLTVDTGF NG+ TIK ++SVNLSLGD Q
Sbjct: 97  VIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQ 156

Query: 161 LASQFQEIPLDLRMVEAERIGFDVLKKTAVDKLPNDLEGMEASMEKLLALIDD 3
           LA+QFQEIPLDLRMVEAER+GFD+LK T++DKLPNDLEGMEASME+LLALIDD
Sbjct: 157 LAAQFQEIPLDLRMVEAERLGFDILKTTSIDKLPNDLEGMEASMERLLALIDD 209


>ref|XP_002526864.1| eukaryotic translation initiation factor 3f, eif3f, putative
           [Ricinus communis] gi|223533763|gb|EEF35495.1|
           eukaryotic translation initiation factor 3f, eif3f,
           putative [Ricinus communis]
          Length = 287

 Score =  307 bits (787), Expect = 5e-82
 Identities = 148/173 (85%), Positives = 161/173 (93%)
 Frame = -3

Query: 521 RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKE 342
           RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNES DQVALDIDYHHNML SHQKVNPKE
Sbjct: 39  RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESSDQVALDIDYHHNMLLSHQKVNPKE 98

Query: 341 VLVGWFSTGFGVTGGSALIHEFYSRETTNPVHLTVDTGFTNGDATIKGFVSVNLSLGDHQ 162
           V+VGW+STG GVTGGSALIHEFYSRE  NPVHLTVDTGF NG+ TIK +VSVNLSLGD Q
Sbjct: 99  VIVGWYSTGLGVTGGSALIHEFYSREVPNPVHLTVDTGFRNGEGTIKAYVSVNLSLGDRQ 158

Query: 161 LASQFQEIPLDLRMVEAERIGFDVLKKTAVDKLPNDLEGMEASMEKLLALIDD 3
           LA+QFQEIPLDLRM+EAER+G+D+LK T VDK+P+DLEGME SM++LLALIDD
Sbjct: 159 LAAQFQEIPLDLRMLEAERVGYDILKTTMVDKIPSDLEGMEVSMQRLLALIDD 211


>ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F
           [Vitis vinifera] gi|296086088|emb|CBI31529.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score =  305 bits (780), Expect = 3e-81
 Identities = 148/173 (85%), Positives = 161/173 (93%)
 Frame = -3

Query: 521 RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKE 342
           RPDQAERVIGTLLGS+ PDGTVDIRNSYAVPHNES DQVALDIDYHHNML SHQKVNPKE
Sbjct: 37  RPDQAERVIGTLLGSISPDGTVDIRNSYAVPHNESSDQVALDIDYHHNMLLSHQKVNPKE 96

Query: 341 VLVGWFSTGFGVTGGSALIHEFYSRETTNPVHLTVDTGFTNGDATIKGFVSVNLSLGDHQ 162
           V+VGW+STG GVTGGSALIHEFYSRE  NP+HLTVDT F NG+ATIK FVSV+LSLG+ Q
Sbjct: 97  VIVGWYSTGLGVTGGSALIHEFYSREVQNPIHLTVDTTFRNGEATIKAFVSVSLSLGERQ 156

Query: 161 LASQFQEIPLDLRMVEAERIGFDVLKKTAVDKLPNDLEGMEASMEKLLALIDD 3
           LA+QFQEIPLDLRMVEAER+GFD+LK T V+KLP+DLEGMEASME+LLALIDD
Sbjct: 157 LAAQFQEIPLDLRMVEAERVGFDILKTTMVEKLPSDLEGMEASMERLLALIDD 209


>ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|118484603|gb|ABK94175.1|
           unknown [Populus trichocarpa]
           gi|222864212|gb|EEF01343.1| predicted protein [Populus
           trichocarpa]
          Length = 287

 Score =  304 bits (778), Expect = 6e-81
 Identities = 146/173 (84%), Positives = 161/173 (93%)
 Frame = -3

Query: 521 RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKE 342
           RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNES +QVALDIDYHHN+L SHQKVNPKE
Sbjct: 39  RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESSEQVALDIDYHHNLLLSHQKVNPKE 98

Query: 341 VLVGWFSTGFGVTGGSALIHEFYSRETTNPVHLTVDTGFTNGDATIKGFVSVNLSLGDHQ 162
           V+VGW+STG GVTGGSALIH+FYSRE  NP+HLTVDTGF+NG+ TIK +VSVNLSLGD  
Sbjct: 99  VIVGWYSTGLGVTGGSALIHDFYSREVPNPIHLTVDTGFSNGEGTIKAYVSVNLSLGDRP 158

Query: 161 LASQFQEIPLDLRMVEAERIGFDVLKKTAVDKLPNDLEGMEASMEKLLALIDD 3
           LA+QFQE+PLDLRMVEAERIGFDVLK T VDK+P+DLEGME SM++LLALIDD
Sbjct: 159 LAAQFQEVPLDLRMVEAERIGFDVLKTTMVDKIPSDLEGMEISMQRLLALIDD 211


>ref|XP_003538452.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Glycine max]
          Length = 288

 Score =  302 bits (774), Expect = 2e-80
 Identities = 145/173 (83%), Positives = 161/173 (93%)
 Frame = -3

Query: 521 RPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKE 342
           RPDQA+RVIGTLLGSVLPDGTVDIRNSYAVPHNES++QVALDI+YHHNML SHQKVNPKE
Sbjct: 40  RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNESIEQVALDIEYHHNMLISHQKVNPKE 99

Query: 341 VLVGWFSTGFGVTGGSALIHEFYSRETTNPVHLTVDTGFTNGDATIKGFVSVNLSLGDHQ 162
           ++VGW+STG GVTGGSALIHEFYSRE  NP+HLTVDTGFTNG  TIK +VS NLSLG+ Q
Sbjct: 100 IIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTNGAGTIKAYVSNNLSLGERQ 159

Query: 161 LASQFQEIPLDLRMVEAERIGFDVLKKTAVDKLPNDLEGMEASMEKLLALIDD 3
           +A+QFQEIPLDLRMVEAERIGFD+LK TAVDK+P+DLEGMEASM+ LL LIDD
Sbjct: 160 IAAQFQEIPLDLRMVEAERIGFDMLKATAVDKIPSDLEGMEASMQHLLVLIDD 212


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