BLASTX nr result

ID: Bupleurum21_contig00013859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013859
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15315.3| unnamed protein product [Vitis vinifera]              323   5e-86
ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3B...   316   8e-84
ref|XP_004169646.1| PREDICTED: LOW QUALITY PROTEIN: ras GTPase-a...   315   1e-83
ref|XP_004138199.1| PREDICTED: ras GTPase-activating protein-bin...   314   3e-83
ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|2...   309   1e-81

>emb|CBI15315.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  323 bits (829), Expect = 5e-86
 Identities = 193/453 (42%), Positives = 272/453 (60%), Gaps = 7/453 (1%)
 Frame = -3

Query: 1439 VGNAFVYQYYYVLCNSPQSVYKFYNDLSFISRPESDGTMVSVTTLKAIDEKIQSLDSKNS 1260
            VGNAFV QYY +L  +P+ +YKFY D S +SRP+S G+M +VTTL+AI++KI S      
Sbjct: 50   VGNAFVDQYYPILHQNPELLYKFYQDSSVLSRPDSSGSMTTVTTLQAINDKIMSFHYGEY 109

Query: 1259 KPEIETVDSQESYQTGVIVVVTGSLIGSDGIKRKFSQTFFLAPQEKGYFVLNDVLRYVEE 1080
            K EIET D+Q+SY+ GV V+VTGS+   D +KRKF Q+FFLAPQ+ GYFVLND+  Y+EE
Sbjct: 110  KMEIETADAQDSYKEGVTVLVTGSVTLKDNVKRKFGQSFFLAPQDNGYFVLNDIFTYIEE 169

Query: 1079 IRQLEINSAPVDCDDDSVPSAPLSCVSEATHVLPGHTSDPSSANKTQEPEESEAQGSGGE 900
             + L+ N APVD  +++ P+A L+   EA HV      DP+    T   EE E   +  E
Sbjct: 170  KKSLQENFAPVDGINETAPTAALTPDPEANHVPDHLVVDPA----TPSFEEEEDLNNVAE 225

Query: 899  IYSSLDEKKHSVVVQEIVNEEPTHHXXXXXXXXXXXXXSGIKQ-ENRSYASIVKTPKSAA 723
            +    D ++ SV+ +E V E P+               +  +    +SYASIVK  K +A
Sbjct: 226  VCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPAAQEDAPKKSYASIVKVMKGSA 285

Query: 722  KPADKLSWTPTKTS----QNKVKSTSNISPEPEASAPTIDNGPEGHNPPQEDVEGHSIYI 555
                  + +  + +      ++  ++  +P PEA  PT D+ PE  N  +   EG SIY+
Sbjct: 286  TSTPVFATSTVRAAPANIDQQLAGSAKSAPAPEAWTPTSDSAPESSNINE---EGFSIYV 342

Query: 554  RNLPVNTTVSLVTKEFSKFGPIKHGGVQVKVHKMHGYYYGFVEFETFDSMQNAVKESPIA 375
            R+LP++ TV  + +EF KFGPIK  G+QV+ +K  G+ +GFVEFE+  SMQ+A++ SPI 
Sbjct: 343  RHLPLSATVPQLEEEFKKFGPIKQDGIQVRSNK-QGFCFGFVEFESLSSMQSALEASPIT 401

Query: 374  IGRRQVVVEEKKSTIKVGRTGNTERYTSGRGEIQN-SFRGRG-YVDNRYYGKSEIRISRN 201
            IG RQ VVEEK++T +VG +G   RY  GRG  +N +FRGRG +   R YG++E R    
Sbjct: 402  IGDRQAVVEEKRTTTRVGASGR-GRYPPGRGGFRNDNFRGRGNFGGGRGYGRNESRNQGE 460

Query: 200  FPNRPKSNSGSNTEYRYQRVERGEIGNRGSQAG 102
            +  R +  +G N E  YQRV +   G  G Q G
Sbjct: 461  YSGRARGPTGRNGE-AYQRVNQNGSGKTGRQGG 492


>ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
            [Vitis vinifera]
          Length = 469

 Score =  316 bits (810), Expect = 8e-84
 Identities = 192/455 (42%), Positives = 271/455 (59%), Gaps = 9/455 (1%)
 Frame = -3

Query: 1439 VGNAFVYQYYYVLCNSPQSVYKFYNDLSFISRPESDGTMVSVTTLKAIDEKIQSLDSKNS 1260
            VGNAFV QYY +L  +P+ +YKFY D S +SRP+S G+M +VTTL+AI++KI S      
Sbjct: 17   VGNAFVDQYYPILHQNPELLYKFYQDSSVLSRPDSSGSMTTVTTLQAINDKIMSFHYGEY 76

Query: 1259 KPEIETVDSQESYQTGVIVVVTGSLIGSDGIKRKFSQTFFLAPQEKGYFVLNDVLRYVEE 1080
            K EIET D+Q+SY+ GV V+VTGS+   D +KRKF Q+FFLAPQ+ GYFVLND+  Y+EE
Sbjct: 77   KMEIETADAQDSYKEGVTVLVTGSVTLKDNVKRKFGQSFFLAPQDNGYFVLNDIFTYIEE 136

Query: 1079 IRQLEINSAPVDCDDDSVPSAPLSCVS--EATHVLPGHTSDPSSANKTQEPEESEAQGSG 906
             + L+ N APVD  +++ P+A L+      A HV      DP+    T   EE E   + 
Sbjct: 137  KKSLQENFAPVDGINETAPTAALTPDPGLXANHVPDHLVVDPA----TPSFEEEEDLNNV 192

Query: 905  GEIYSSLDEKKHSVVVQEIVNEEPTHHXXXXXXXXXXXXXSGIKQ-ENRSYASIVKTPKS 729
             E+    D ++ SV+ +E V E P+               +  +    +SYASIVK  K 
Sbjct: 193  AEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPAAQEDAPKKSYASIVKVMKG 252

Query: 728  AAKPADKLSWTPTKTS----QNKVKSTSNISPEPEASAPTIDNGPEGHNPPQEDVEGHSI 561
            +A      + +  + +      ++  ++  +P PEA  PT D+ PE  N  +   EG SI
Sbjct: 253  SATSTPVFATSTVRAAPANIDQQLAGSAKSAPAPEAWTPTSDSAPESSNINE---EGFSI 309

Query: 560  YIRNLPVNTTVSLVTKEFSKFGPIKHGGVQVKVHKMHGYYYGFVEFETFDSMQNAVKESP 381
            Y+R+LP++ TV  + +EF KFGPIK  G+QV+ +K  G+ +GFVEFE+  SMQ+A++ SP
Sbjct: 310  YVRHLPLSATVPQLEEEFKKFGPIKQDGIQVRSNK-QGFCFGFVEFESLSSMQSALEASP 368

Query: 380  IAIGRRQVVVEEKKSTIKVGRTGNTERYTSGRGEIQN-SFRGRG-YVDNRYYGKSEIRIS 207
            I IG RQ VVEEK++T +VG +G   RY  GRG  +N +FRGRG +   R YG++E R  
Sbjct: 369  ITIGDRQAVVEEKRTTTRVGASGR-GRYPPGRGGFRNDNFRGRGNFGGGRGYGRNESRNQ 427

Query: 206  RNFPNRPKSNSGSNTEYRYQRVERGEIGNRGSQAG 102
              +  R +  +G N E  YQRV +   G  G Q G
Sbjct: 428  GEYSGRARGPTGRNGE-AYQRVNQNGSGKTGRQGG 461


>ref|XP_004169646.1| PREDICTED: LOW QUALITY PROTEIN: ras GTPase-activating protein-binding
            protein 1-like [Cucumis sativus]
          Length = 472

 Score =  315 bits (808), Expect = 1e-83
 Identities = 194/460 (42%), Positives = 273/460 (59%), Gaps = 12/460 (2%)
 Frame = -3

Query: 1442 IVGNAFVYQYYYVLCNSPQSVYKFYNDLSFISRPESDGTMVSVTTLKAIDEKIQSLDSKN 1263
            +VGNAFV QYY++L +SPQ V++FY D S +SRP+ +G M +VT+++AI++KI SL+  +
Sbjct: 17   VVGNAFVGQYYHILHHSPQLVHRFYQDTSLLSRPDGNGVMTTVTSMQAINDKIISLNYGD 76

Query: 1262 SKPEIETVDSQESYQTGVIVVVTGSLIGSDGIKRKFSQTFFLAPQEKGYFVLNDVLRYVE 1083
               EI T D+QES++ GVIV+VTG L G D ++RKFSQTFF APQ+KGY+VLNDVLRYVE
Sbjct: 77   YTAEIITADAQESHEKGVIVLVTGCLTGKDSLRRKFSQTFFXAPQDKGYYVLNDVLRYVE 136

Query: 1082 EIRQLEINSAPVDCDDDSVPSAPLSCVSEATHVLPGH-TSDPSSANKTQEPEESEAQGSG 906
            E   +  NS+  D   D+  +   +   E +HV P H T +P +A       E E   + 
Sbjct: 137  ETESIRSNSSSGDAIKDNTVTVTSTPEPEPSHV-PNHLTVEPPTA------LEEEDMNNV 189

Query: 905  GEIYSSLDEKKHSVVVQEIVNEEPTHHXXXXXXXXXXXXXSGIKQEN---RSYASIVKTP 735
             E+       + SV+ +E+V E P  H             + + QE+   +SYASIVK P
Sbjct: 190  PEVCDPSSNDEGSVIEEEVVVEAP--HPSEHEVVVTAVDAAPVAQEDAPKKSYASIVKVP 247

Query: 734  KSAAKPADKLSWT----PTKTSQNKVKSTSNISPEPEASAPTIDNGPEGHNPPQEDVEGH 567
            K+ + P    + T    P     ++       +P P+ SA   DN PE  N   E+ EGH
Sbjct: 248  KTVSGPVYVPTTTVRAPPPANPDHQSTGLVKPAPVPDVSAANGDNLPESSN-LHEEAEGH 306

Query: 566  SIYIRNLPVNTTVSLVTKEFSKFGPIKHGGVQVKVHKMHGYYYGFVEFETFDSMQNAVKE 387
            SIY+RNLP + TV  + +EF KFGPIK  G+QV+ +K  G+ +GFVEFE   S+  A++ 
Sbjct: 307  SIYVRNLPFDATVDHLEEEFKKFGPIKRDGIQVRSNK-QGFCFGFVEFEQLSSVHGALEA 365

Query: 386  SPIAIGRRQVVVEEKKSTIKVGRTGNTERYTSGRGE--IQNSFRGRG-YVDNR-YYGKSE 219
            SP+ IG RQ VVEEK++T +V  +G   R+++GRG     +SFR RG Y   R  YG++E
Sbjct: 366  SPLTIGDRQAVVEEKRTTTRVSGSGR-GRFSTGRGGGFRNDSFRARGNYGGGRGGYGRNE 424

Query: 218  IRISRNFPNRPKSNSGSNTEYRYQRVERGEIGNRGSQAGG 99
             R    F  RP+ ++G N E  YQR  +   G  G + GG
Sbjct: 425  FRNQGEFSGRPRGSTGRNGEGGYQRANQNGGGRGGGRQGG 464


>ref|XP_004138199.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
            [Cucumis sativus]
          Length = 472

 Score =  314 bits (805), Expect = 3e-83
 Identities = 194/460 (42%), Positives = 273/460 (59%), Gaps = 12/460 (2%)
 Frame = -3

Query: 1442 IVGNAFVYQYYYVLCNSPQSVYKFYNDLSFISRPESDGTMVSVTTLKAIDEKIQSLDSKN 1263
            +VGNAFV QYY++L +SPQ V++FY D S +SRP+ +G M +VT+++AI++KI SL+  +
Sbjct: 17   VVGNAFVGQYYHILHHSPQLVHRFYQDTSLLSRPDGNGVMTTVTSMQAINDKIISLNYGD 76

Query: 1262 SKPEIETVDSQESYQTGVIVVVTGSLIGSDGIKRKFSQTFFLAPQEKGYFVLNDVLRYVE 1083
               EI T D+QES++ GVIV+VTG L G D ++RKFSQTFFLAPQ+KGY+VLNDVLRYVE
Sbjct: 77   YTAEIITADAQESHEKGVIVLVTGCLTGKDSLRRKFSQTFFLAPQDKGYYVLNDVLRYVE 136

Query: 1082 EIRQLEINSAPVDCDDDSVPSAPLSCVSEATHVLPGH-TSDPSSANKTQEPEESEAQGSG 906
            E   +  NS+  D   D+  +   +   E +HV P H T +P +A       E E   + 
Sbjct: 137  ETESIRSNSSSGDAIKDNTVTVTSTPEPEPSHV-PNHLTVEPPTA------LEEEDMNNV 189

Query: 905  GEIYSSLDEKKHSVVVQEIVNEEPTHHXXXXXXXXXXXXXSGIKQEN---RSYASIVKTP 735
             E+       + SV+ +E+V E P  H             + + QE+   +SYASIVK P
Sbjct: 190  PEVCDPSSNDEGSVIEEEVVVEAP--HPSEHEVVVTAVDAAPVAQEDAPKKSYASIVKVP 247

Query: 734  KSAAKPADKLSWT----PTKTSQNKVKSTSNISPEPEASAPTIDNGPEGHNPPQEDVEGH 567
            K+ + P    + T    P     ++       +P P+ SA   DN PE  N   E+ EGH
Sbjct: 248  KTVSGPVYVPTTTVRAPPPANPDHQSTGLVKPAPVPDVSAANGDNLPESSN-LHEEAEGH 306

Query: 566  SIYIRNLPVNTTVSLVTKEFSKFGPIKHGGVQVKVHKMHGYYYGFVEFETFDSMQNAVKE 387
            SIY+RNLP + TV  + +EF KFGPIK  G+QV+ +K  G+ +GFVEFE   S+  A++ 
Sbjct: 307  SIYVRNLPFDATVDHLEEEFKKFGPIKRDGIQVRSNK-QGFCFGFVEFEQLSSVHGALEA 365

Query: 386  SPIAIGRRQVVVEEKKSTIKVGRTGNTERYTSGRGE--IQNSFRGRG-YVDNR-YYGKSE 219
            SP+ IG  Q VVEEK++T +V  +G   R+++GRG     +SFR RG Y   R  YG++E
Sbjct: 366  SPLTIGDCQAVVEEKRTTTRVSGSGR-GRFSTGRGGGFRNDSFRARGNYGGGRGGYGRNE 424

Query: 218  IRISRNFPNRPKSNSGSNTEYRYQRVERGEIGNRGSQAGG 99
             R    F  RP+ ++G N E  YQR  +   G  G + GG
Sbjct: 425  FRNQGEFSGRPRGSTGRNGEGGYQRANQNGGGRGGGRQGG 464


>ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|222867121|gb|EEF04252.1|
            predicted protein [Populus trichocarpa]
          Length = 458

 Score =  309 bits (791), Expect = 1e-81
 Identities = 188/445 (42%), Positives = 259/445 (58%), Gaps = 8/445 (1%)
 Frame = -3

Query: 1442 IVGNAFVYQYYYVLCNSPQSVYKFYNDLSFISRPESDGTMVSVTTLKAIDEKIQSLDSKN 1263
            +VGNAFV QYYY+L  SP+SV++FY D S +SRP+++G + SVTT++ I+EKI SLD K+
Sbjct: 16   VVGNAFVEQYYYILLTSPESVHRFYQDSSVLSRPDANGVVTSVTTMQGINEKILSLDFKD 75

Query: 1262 SKPEIETVDSQESYQTGVIVVVTGSLIGSDGIKRKFSQTFFLAPQEKGYFVLNDVLRYVE 1083
             K EI+T D+Q SY+ GV V+VTG   G D +KRKF+Q+FFLAPQ+ GYFVLNDV RYV+
Sbjct: 76   CKAEIKTADAQISYKDGVTVLVTGCFTGKDNVKRKFAQSFFLAPQDSGYFVLNDVFRYVD 135

Query: 1082 EIRQLEINSAPVDCDDDSVPSAPLSCVSEATHVLPGHTSDPSSANKTQEPEESEAQGSGG 903
            +   LE +       +  VPS P           P H  DPS+ +      E E +    
Sbjct: 136  DNESLESHLGHGVDSNPIVPSIP--------DQEPAHVPDPSAPDPLPSVVE-EHKKLAE 186

Query: 902  EIYSSLDEKKHSVVVQEIVNEEPTHHXXXXXXXXXXXXXSGIKQENRSYASIVKTPKSAA 723
            +   S D +K  V  +EI+ E+ +                      +SYASIVK  K + 
Sbjct: 187  KANESSDHEKQLVNDREIIVEDLSDENNVPVVVESVSSMIQEDAPKKSYASIVKVAKGSL 246

Query: 722  ------KPADKLSWTPTKTSQNKVKSTSNISPEPEASAPTIDNGPEGHNPPQEDVEGHSI 561
                   PA+     P +T     KS + +  EPE S P+ ++ PE  +  QE+VEGHSI
Sbjct: 247  LPIKVYLPANTTKMVPKRTENQSEKSVAPVL-EPETSVPSSNDAPE-TSSAQEEVEGHSI 304

Query: 560  YIRNLPVNTTVSLVTKEFSKFGPIKHGGVQVKVHKMHGYYYGFVEFETFDSMQNAVKESP 381
            YIRNLP N TVS +  EF KFGPIK GGVQV+ ++  GY +GFVEF + +SM +A++ SP
Sbjct: 305  YIRNLPFNLTVSQLEAEFEKFGPIKEGGVQVRYNRQQGYCFGFVEFHSPNSMNSAIEASP 364

Query: 380  IAIGRRQVVVEEKKSTIKVGRTGNTERYTSGRGEIQN-SFRGRG-YVDNRYYGKSEIRIS 207
            + IG RQ+VVE K++  +VG       ++ GR   +N SFRGRG Y   R +G+++ R  
Sbjct: 365  MTIGGRQIVVEMKRTNTRVG--SGRGNFSYGRAGFRNDSFRGRGNYGGGRGFGRND-RSR 421

Query: 206  RNFPNRPKSNSGSNTEYRYQRVERG 132
              F  R +S+SG    Y+  R   G
Sbjct: 422  GEFSGRGRSSSGQVEGYQQGRGRGG 446


Top