BLASTX nr result

ID: Bupleurum21_contig00013849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013849
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520551.1| eukaryotic translation initiation factor 2c,...   176   2e-42
ref|XP_003607856.1| Protein argonaute [Medicago truncatula] gi|3...   174   5e-42
gb|AFV08637.1| AGO2A2 [Solanum lycopersicum]                          170   1e-40
gb|AFV15379.1| AGO2A [Solanum lycopersicum]                           164   9e-39
ref|XP_002332150.1| argonaute protein group [Populus trichocarpa...   164   9e-39

>ref|XP_002520551.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540265|gb|EEF41837.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 338

 Score =  176 bits (445), Expect = 2e-42
 Identities = 88/145 (60%), Positives = 107/145 (73%)
 Frame = -1

Query: 436 VRSTRLVANHFHVSFNPQSVIKHYDVDVKLDVAPGSKMAKKSVPKSELREIREKLFSDRA 257
           +R+  L  NHF V FN + +I+HYD+DVK DVAP    A K + KS L  IR KLF++  
Sbjct: 37  IRTANLRVNHFPVRFNSECIIRHYDIDVKPDVAPKGGRAVK-MSKSNLATIRNKLFTEDP 95

Query: 256 DILPMDSTAYDGEKNIFSAVQLPTGEFKVELSDGEDTRSRTYTFTITLVNELKASKLKDY 77
              P+  TAYDGEKNIFSAV LPTG+FKVE S+GED R RTYTFTI  V+ELK  KLKDY
Sbjct: 96  SQFPLSMTAYDGEKNIFSAVPLPTGKFKVEFSEGEDMRDRTYTFTIKFVSELKLCKLKDY 155

Query: 76  LNGNIFHMPREILQGMDLVMKENPS 2
           L+G +  +PR+ILQGMD+VMKENP+
Sbjct: 156 LSGKLLSIPRDILQGMDVVMKENPA 180


>ref|XP_003607856.1| Protein argonaute [Medicago truncatula] gi|355508911|gb|AES90053.1|
           Protein argonaute [Medicago truncatula]
          Length = 977

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/145 (58%), Positives = 109/145 (75%)
 Frame = -1

Query: 436 VRSTRLVANHFHVSFNPQSVIKHYDVDVKLDVAPGSKMAKKSVPKSELREIREKLFSDRA 257
           +R  RL  NHF V+FNPQS+I HYDVDVK  V P   +  K + KS+L  IR+KL +D  
Sbjct: 126 IRDCRLRVNHFPVAFNPQSIIMHYDVDVKASVPPRKGLPPKKISKSDLSMIRDKLCADHP 185

Query: 256 DILPMDSTAYDGEKNIFSAVQLPTGEFKVELSDGEDTRSRTYTFTITLVNELKASKLKDY 77
            ILP+  T+YDGEKNIFS+V LP   F VE+S GED R+ +YT TITLVN+L+  KL+DY
Sbjct: 186 QILPLLKTSYDGEKNIFSSVPLPEETFTVEVSKGEDERAVSYTVTITLVNKLELRKLRDY 245

Query: 76  LNGNIFHMPREILQGMDLVMKENPS 2
           L+GN++ +PR+ILQGMDLV+KENP+
Sbjct: 246 LSGNVYSIPRDILQGMDLVVKENPA 270


>gb|AFV08637.1| AGO2A2 [Solanum lycopersicum]
          Length = 1042

 Score =  170 bits (431), Expect = 1e-40
 Identities = 89/145 (61%), Positives = 107/145 (73%)
 Frame = -1

Query: 436 VRSTRLVANHFHVSFNPQSVIKHYDVDVKLDVAPGSKMAKKSVPKSELREIREKLFSDRA 257
           V+S  L+ANHF V FNPQS I HYDVD++   A G++  KK   KS L  IREKL +D  
Sbjct: 214 VKSIALLANHFPVRFNPQSTIMHYDVDIQ-QRADGNRPVKKLTNKSVLHMIREKLCADDP 272

Query: 256 DILPMDSTAYDGEKNIFSAVQLPTGEFKVELSDGEDTRSRTYTFTITLVNELKASKLKDY 77
              P+D TAYDG+KNIFSAVQLPTG F V  SDGED R R+Y  TI LV ELK  KLK+Y
Sbjct: 273 TRFPLDKTAYDGKKNIFSAVQLPTGCFAVNWSDGEDARLRSYDITIKLVAELKLCKLKEY 332

Query: 76  LNGNIFHMPREILQGMDLVMKENPS 2
           L+G++ H+PR+ILQGM+LVMKENP+
Sbjct: 333 LSGSLSHIPRDILQGMELVMKENPT 357


>gb|AFV15379.1| AGO2A [Solanum lycopersicum]
          Length = 1057

 Score =  164 bits (414), Expect = 9e-39
 Identities = 89/153 (58%), Positives = 107/153 (69%), Gaps = 8/153 (5%)
 Frame = -1

Query: 436 VRSTRLVANHFHVSFNPQSVIKHYDVDVKLDVAPGSKMAKKSVPKSELREIREKLFSDRA 257
           V+S  L+ANHF V FNPQS I HYDVD++   A G++  KK   KS L  IREKL +D  
Sbjct: 221 VKSIALLANHFPVRFNPQSTIMHYDVDIQ-QRADGNRPVKKLTNKSVLHMIREKLCADDP 279

Query: 256 DILPMDSTAYDGEKNIFSAVQLPTG--------EFKVELSDGEDTRSRTYTFTITLVNEL 101
              P+D TAYDG+KNIFSAVQLPTG         F V  SDGED R R+Y  TI LV EL
Sbjct: 280 TRFPLDKTAYDGKKNIFSAVQLPTGCFAVNWSDGFAVNWSDGEDARLRSYDITIKLVAEL 339

Query: 100 KASKLKDYLNGNIFHMPREILQGMDLVMKENPS 2
           K  KLK+YL+G++ H+PR+ILQGM+LVMKENP+
Sbjct: 340 KLCKLKEYLSGSLSHIPRDILQGMELVMKENPT 372


>ref|XP_002332150.1| argonaute protein group [Populus trichocarpa]
           gi|222875200|gb|EEF12331.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1020

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/145 (56%), Positives = 108/145 (74%)
 Frame = -1

Query: 436 VRSTRLVANHFHVSFNPQSVIKHYDVDVKLDVAPGSKMAKKSVPKSELREIREKLFSDRA 257
           VR+ RL+ NHF V F+P+S+I+HYDVD+K +V P      K + KS L  IR+KLF+D  
Sbjct: 179 VRTPRLLVNHFPVKFSPKSIIRHYDVDIKQEVPPKHGRPGK-ISKSILTMIRDKLFTDDP 237

Query: 256 DILPMDSTAYDGEKNIFSAVQLPTGEFKVELSDGEDTRSRTYTFTITLVNELKASKLKDY 77
              P+  TAYD EKNIFSAV LPTG F+VE+S+ ED + R+Y FTI LVNEL+  KLKDY
Sbjct: 238 SRFPLGKTAYDREKNIFSAVPLPTGTFRVEVSEAEDAKPRSYLFTIKLVNELQLRKLKDY 297

Query: 76  LNGNIFHMPREILQGMDLVMKENPS 2
           L+G +  +PR+ILQGMD+V+KE+P+
Sbjct: 298 LDGTLRSVPRDILQGMDVVVKEHPA 322


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