BLASTX nr result

ID: Bupleurum21_contig00013834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013834
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   160   8e-38
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   159   2e-37
ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...   155   4e-36
ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding...   154   6e-36
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding...   154   7e-36

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  160 bits (406), Expect = 8e-38
 Identities = 67/106 (63%), Positives = 90/106 (84%)
 Frame = -3

Query: 318 WSPDGKMLAVPGLKNDVVIYDKDLSKTLFALGGPSGHAQPVCFLSWSPNGKYLATSGLDR 139
           WSPDG+ LAVPGL+NDVV+YD+D ++ LF+L G   H QP+CFLSWSPNGKY+AT+GLDR
Sbjct: 202 WSPDGETLAVPGLRNDVVMYDRDTAEKLFSLRGD--HVQPICFLSWSPNGKYMATAGLDR 259

Query: 138 ELIVWNVDEKKDIARQDLDEILCCMAWAPHGNELAFINTMGRYGVW 1
           ++++W+VD+++DI RQ  D+ +CCMAW P+GN LA I+ MG+YGVW
Sbjct: 260 QILIWDVDQRQDIDRQKFDDRICCMAWKPNGNALAVIDVMGKYGVW 305


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Cucumis sativus] gi|449477125|ref|XP_004154937.1|
           PREDICTED: WD repeat and HMG-box DNA-binding protein
           1-like [Cucumis sativus]
          Length = 962

 Score =  159 bits (402), Expect = 2e-37
 Identities = 69/106 (65%), Positives = 87/106 (82%)
 Frame = -3

Query: 318 WSPDGKMLAVPGLKNDVVIYDKDLSKTLFALGGPSGHAQPVCFLSWSPNGKYLATSGLDR 139
           WSPDG+ LAVPGL+NDVV+YD+D ++ LF+L G   H QP+CFLSWSPNGKY+ATS LDR
Sbjct: 204 WSPDGETLAVPGLRNDVVMYDRDTAEKLFSLRGD--HTQPICFLSWSPNGKYMATSSLDR 261

Query: 138 ELIVWNVDEKKDIARQDLDEILCCMAWAPHGNELAFINTMGRYGVW 1
           ++++W+VD+K DI RQ  DE +CCMAW P GN LA I+ MG+YGVW
Sbjct: 262 QILIWDVDQKLDIDRQKFDERICCMAWKPIGNALAVIDVMGKYGVW 307


>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
           gi|355484738|gb|AES65941.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 991

 Score =  155 bits (391), Expect = 4e-36
 Identities = 65/106 (61%), Positives = 85/106 (80%)
 Frame = -3

Query: 318 WSPDGKMLAVPGLKNDVVIYDKDLSKTLFALGGPSGHAQPVCFLSWSPNGKYLATSGLDR 139
           WSPDG+ LA+PGLKNDVV+YD+D ++ LF L G   H QP+CFL WSPNGKY+ATS LD+
Sbjct: 203 WSPDGETLAIPGLKNDVVMYDRDTAEKLFTLRGD--HTQPICFLCWSPNGKYMATSSLDK 260

Query: 138 ELIVWNVDEKKDIARQDLDEILCCMAWAPHGNELAFINTMGRYGVW 1
           ++++W+VD+K+DI RQ  DE +CCM W P GN LA I+ MG+YG+W
Sbjct: 261 QILIWDVDKKQDIDRQKFDERVCCMTWKPIGNALAVIDVMGKYGIW 306


>ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 972

 Score =  154 bits (390), Expect = 6e-36
 Identities = 66/106 (62%), Positives = 86/106 (81%)
 Frame = -3

Query: 318 WSPDGKMLAVPGLKNDVVIYDKDLSKTLFALGGPSGHAQPVCFLSWSPNGKYLATSGLDR 139
           WSPDG+ LAVPGLKNDVV+YD+D ++ + +L G   H QP+CFL WSPNGKY+A+SGLDR
Sbjct: 203 WSPDGETLAVPGLKNDVVMYDRDTAEKVLSLRGD--HIQPICFLCWSPNGKYIASSGLDR 260

Query: 138 ELIVWNVDEKKDIARQDLDEILCCMAWAPHGNELAFINTMGRYGVW 1
           ++++W+VD K+DI RQ  DE +CCMAW P GN LA I+ MG+YG+W
Sbjct: 261 QVLIWDVDRKQDIDRQKFDERVCCMAWKPTGNALAVIDIMGKYGIW 306


>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 994

 Score =  154 bits (389), Expect = 7e-36
 Identities = 66/106 (62%), Positives = 86/106 (81%)
 Frame = -3

Query: 318 WSPDGKMLAVPGLKNDVVIYDKDLSKTLFALGGPSGHAQPVCFLSWSPNGKYLATSGLDR 139
           WSPDG+ LAVPGLKNDVV+YD+D ++ +F L G   H QP+CFL WSPNG+Y+ATSGLDR
Sbjct: 203 WSPDGETLAVPGLKNDVVMYDRDTAEKVFFLRGD--HIQPICFLCWSPNGEYIATSGLDR 260

Query: 138 ELIVWNVDEKKDIARQDLDEILCCMAWAPHGNELAFINTMGRYGVW 1
           ++++W+V +K+DI RQ  DE +CCMAW P GN LA I+ MG+YG+W
Sbjct: 261 QVLIWDVSKKQDIDRQKFDERVCCMAWKPTGNALAVIDVMGKYGIW 306


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