BLASTX nr result

ID: Bupleurum21_contig00013833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013833
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   111   7e-23
ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   110   9e-23
emb|CBI15364.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding...   108   3e-22
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding...   106   2e-21

>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Cucumis sativus] gi|449477125|ref|XP_004154937.1|
           PREDICTED: WD repeat and HMG-box DNA-binding protein
           1-like [Cucumis sativus]
          Length = 962

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/99 (55%), Positives = 74/99 (74%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   LAFDSSGTMLAVGVDDGNILIVNTIDVSVERVLEGHEGSVTGLSFGNGGKHLASVDSVGT 181
           L F+ SG++LA G DD  I +VNT+D S+ RVL+GH+G+VTGL+F    ++LASVDS+GT
Sbjct: 111 LGFNKSGSLLAAGGDDDGIKLVNTVDGSIARVLKGHKGAVTGLAFDPNSEYLASVDSIGT 170

Query: 182 VRHWSPRSGRLFHDLKGIAPSS-SGVFVMNALKWSPDGK 295
           V  W  +SG + H+LKGIAP++ S   VMN L WSPDG+
Sbjct: 171 VIIWELQSGSIIHNLKGIAPNTGSDPSVMNVLGWSPDGE 209


>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   LAFDSSGTMLAVGVDDGNILIVNTIDVSVERVLEGHEGSVTGLSFGNGGKHLASVDSVGT 181
           ++F+ SG++LA   DD  I ++NTID S+ RVL+GH+GSVTGL+F   G++LASVDS+GT
Sbjct: 109 ISFNRSGSILAAAGDDEGIKLINTIDGSIARVLKGHKGSVTGLAFDPNGEYLASVDSIGT 168

Query: 182 VRHWSPRSGRLFHDLKGIAP-SSSGVFVMNALKWSPDGK 295
           V  W   SG   H LKGIAP + S + V+NAL WSPDG+
Sbjct: 169 VIQWELHSGTALHILKGIAPDTGSDLSVLNALSWSPDGE 207


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   LAFDSSGTMLAVGVDDGNILIVNTIDVSVERVLEGHEGSVTGLSFGNGGKHLASVDSVGT 181
           ++F+ SG++LA   DD  I ++NTID S+ RVL+GH+GSVTGL+F   G++LASVDS+GT
Sbjct: 109 ISFNRSGSILAAAGDDEGIKLINTIDGSIARVLKGHKGSVTGLAFDPNGEYLASVDSIGT 168

Query: 182 VRHWSPRSGRLFHDLKGIAP-SSSGVFVMNALKWSPDGK 295
           V  W   SG   H LKGIAP + S + V+NAL WSPDG+
Sbjct: 169 VIQWELHSGTALHILKGIAPDTGSDLSVLNALSWSPDGE 207


>ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 972

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   LAFDSSGTMLAVGVDDGNILIVNTIDVSVERVLEGHEGSVTGLSFGNGGKHLASVDSVGT 181
           LAF+ SG+MLA   DD  I ++NT D ++ RVL+GH+GS+TGL+F   G++LAS+DS GT
Sbjct: 110 LAFNKSGSMLAAAGDDEGIKLINTFDGTIARVLKGHKGSITGLAFDPNGEYLASLDSTGT 169

Query: 182 VRHWSPRSGRLFHDLKGIAPSSS-GVFVMNALKWSPDGK 295
           V  W  +SG++ H+LKGIAP +   V  MN L WSPDG+
Sbjct: 170 VILWELQSGKIIHNLKGIAPDTGLDVSTMNVLCWSPDGE 208


>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 994

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   LAFDSSGTMLAVGVDDGNILIVNTIDVSVERVLEGHEGSVTGLSFGNGGKHLASVDSVGT 181
           LAF+ SG+MLA   DD  I ++NT D ++ RVL+GH+GS+TGL+F   G++LAS+D  GT
Sbjct: 110 LAFNKSGSMLAAAGDDEGIKLINTFDGTIARVLKGHKGSITGLAFDPNGEYLASLDLTGT 169

Query: 182 VRHWSPRSGRLFHDLKGIAPSSS-GVFVMNALKWSPDGK 295
           V  W  +SG++ H+LKGIAP +   V  MN L WSPDG+
Sbjct: 170 VILWELQSGKIIHNLKGIAPGTGLDVSTMNVLCWSPDGE 208


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