BLASTX nr result

ID: Bupleurum21_contig00013821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013821
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...   137   7e-31
ref|XP_003532420.1| PREDICTED: RING-H2 zinc finger protein RHA1a...   133   1e-29
ref|XP_003525383.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   132   2e-29
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   127   1e-27
gb|AFK46654.1| unknown [Lotus japonicus]                              126   2e-27

>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/105 (62%), Positives = 79/105 (75%)
 Frame = +3

Query: 33  MGFPLGYTDLLFPKLIFHTLTLLGFIRNFISIVLHFLGLSYFLEPDFSRSIRPDCPDEYS 212
           MGFP+GYT+LL PKL+ HTL++LGFIR  I+ +  +LGL  FLEPD S    P    E+ 
Sbjct: 1   MGFPVGYTELLLPKLLIHTLSILGFIRKLINTLFRYLGLPDFLEPDISWPETPSRVPEFY 60

Query: 213 CVSAALMREFLPVVKFSDIVDPPESCAVCLSEFDGGDEIRRLTNC 347
             SA L+RE LPVVKFSD+VDPP+SCAVCL EF+  DEIRRLTNC
Sbjct: 61  SASAVLIREILPVVKFSDLVDPPDSCAVCLYEFEDHDEIRRLTNC 105


>ref|XP_003532420.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like [Glycine max]
          Length = 160

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/105 (59%), Positives = 79/105 (75%)
 Frame = +3

Query: 33  MGFPLGYTDLLFPKLIFHTLTLLGFIRNFISIVLHFLGLSYFLEPDFSRSIRPDCPDEYS 212
           MGFP+GY++LLFPKL+ H L+LLG +R  I  +L F+GL  FLEPD +       P+E+ 
Sbjct: 1   MGFPVGYSELLFPKLLLHILSLLGLLRKLICSLLRFMGLHDFLEPDIAAWPETRMPEEFE 60

Query: 213 CVSAALMREFLPVVKFSDIVDPPESCAVCLSEFDGGDEIRRLTNC 347
            VSA L+RE LPVVKF ++VDPPE+CAVCLSEF+  DEIR+L NC
Sbjct: 61  SVSATLIREILPVVKFRELVDPPETCAVCLSEFEENDEIRQLANC 105


>ref|XP_003525383.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Glycine max]
          Length = 156

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/106 (59%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
 Frame = +3

Query: 33  MGFPLGYTDLLFPKLIFHTLTLLGFIRNFISIVLHFLGLSYFLEPDFS-RSIRPDCPDEY 209
           MGFP+GY++LLFPKL+ H L+LLG +R  I  +L F+GL  FLEPD +    +   P+E+
Sbjct: 1   MGFPVGYSELLFPKLLLHILSLLGLLRKLICSLLRFMGLHDFLEPDIAWAETQTRVPEEF 60

Query: 210 SCVSAALMREFLPVVKFSDIVDPPESCAVCLSEFDGGDEIRRLTNC 347
             VSA L+RE LPVVKF ++VDPPE+CAVCLSEF+  DEIRRL NC
Sbjct: 61  ESVSATLIREILPVVKFRELVDPPETCAVCLSEFEENDEIRRLANC 106


>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/110 (58%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
 Frame = +3

Query: 33  MGFPLGYTDLLFPKLIFHTLTLLGFIRNFISIVLHFLGLSYFLEPDFSRSIRPDCPDEYS 212
           MGFP+GYT+LL PKL+ HTL+LLGFIR  IS    FLGL+ FLEPD   +       E+ 
Sbjct: 1   MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEPDIVWTEGSTQVPEFQ 60

Query: 213 CVSAALMREFLPVVKFSDIV-----DPPESCAVCLSEFDGGDEIRRLTNC 347
            VSA L+RE LPV+KF ++V     DPP+ CAVCL EF+G +EIRRLTNC
Sbjct: 61  SVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTNC 110


>gb|AFK46654.1| unknown [Lotus japonicus]
          Length = 167

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/105 (58%), Positives = 73/105 (69%)
 Frame = +3

Query: 33  MGFPLGYTDLLFPKLIFHTLTLLGFIRNFISIVLHFLGLSYFLEPDFSRSIRPDCPDEYS 212
           MGFP+GYT+ LFPKL+   L+LLGFIR  +  +  +LGL  FLEPD           E+ 
Sbjct: 1   MGFPVGYTEFLFPKLVLQILSLLGFIRKLVCTLFRYLGLPDFLEPDIVWPDNSTRIPEFE 60

Query: 213 CVSAALMREFLPVVKFSDIVDPPESCAVCLSEFDGGDEIRRLTNC 347
            VSA L+RE LPVVKF ++VDPPESC VCLSEF+  DEIRRL NC
Sbjct: 61  SVSALLIREILPVVKFRELVDPPESCVVCLSEFEESDEIRRLANC 105


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