BLASTX nr result

ID: Bupleurum21_contig00013818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013818
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324750.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-17
emb|CBI20600.3| unnamed protein product [Vitis vinifera]               63   2e-16
ref|XP_002516492.1| conserved hypothetical protein [Ricinus comm...    57   2e-14
ref|XP_002867227.1| binding protein [Arabidopsis lyrata subsp. l...    53   5e-12
tpg|DAA50705.1| TPA: hypothetical protein ZEAMMB73_867388 [Zea m...    48   4e-11

>ref|XP_002324750.1| predicted protein [Populus trichocarpa] gi|222866184|gb|EEF03315.1|
            predicted protein [Populus trichocarpa]
          Length = 1974

 Score = 67.8 bits (164), Expect(2) = 2e-17
 Identities = 28/48 (58%), Positives = 40/48 (83%)
 Frame = +1

Query: 166  EMQWNPLVSKIKNFIIKKAFEEDLETATTLFRSCYNFYKDTLCAMLLS 309
            E +WNP++S+IKN +IKK  +E++ETAT+LFRS YNFY+++ C ML S
Sbjct: 1763 ETKWNPMLSRIKNIVIKKVSDENIETATSLFRSSYNFYRESSCVMLPS 1810



 Score = 46.2 bits (108), Expect(2) = 2e-17
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +2

Query: 308  QLILWAYTLLHGHYTSISVVIKYCEE 385
            +L+LWAY LLHG Y +ISVV+K+CEE
Sbjct: 1844 KLLLWAYALLHGRYANISVVVKHCEE 1869


>emb|CBI20600.3| unnamed protein product [Vitis vinifera]
          Length = 1970

 Score = 62.8 bits (151), Expect(2) = 2e-16
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +1

Query: 166  EMQWNPLVSKIKNFIIKKAFEEDLETATTLFRSCYNFYKDTLCAMLLS 309
            E +W PL+SKIKN II+KA +E+LETA TL R CYNFY+++   ML S
Sbjct: 1763 ETKWVPLLSKIKNLIIRKASDENLETANTLLRCCYNFYRESSSIMLPS 1810



 Score = 47.8 bits (112), Expect(2) = 2e-16
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 308  QLILWAYTLLHGHYTSISVVIKYCEE 385
            +L+LWAYTLLHG  TSISVV+K+CEE
Sbjct: 1844 KLLLWAYTLLHGRCTSISVVVKHCEE 1869


>ref|XP_002516492.1| conserved hypothetical protein [Ricinus communis]
            gi|223544312|gb|EEF45833.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1906

 Score = 57.0 bits (136), Expect(2) = 2e-14
 Identities = 24/55 (43%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
 Frame = +1

Query: 166  EMQWNPLVSKIKNFIIKKAFEEDLETATTLFRSCYNFYKDTLCAML---LSAYLV 321
            E +WNP+++KIKN  I+K  +E++ETA +L +S YNF++++ C +L   L+ Y+V
Sbjct: 1687 ETKWNPVLTKIKNIFIEKVSDENIETANSLLKSSYNFFRESSCVILPSGLNLYMV 1741



 Score = 46.6 bits (109), Expect(2) = 2e-14
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = +2

Query: 308  QLILWAYTLLHGHYTSISVVIKYCEE 385
            +L+LWAYTLLHG Y +I+VV+K+CEE
Sbjct: 1768 KLLLWAYTLLHGRYANIAVVLKHCEE 1793


>ref|XP_002867227.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297313063|gb|EFH43486.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1844

 Score = 52.8 bits (125), Expect(2) = 5e-12
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
 Frame = +1

Query: 37   EPTAAAVTYGLDKKLTSSSTDMEV*YLTKATHGFVSAAHNLFDEMQWNPLVSKIKNFII- 213
            E  A   ++GL +K      D++  + + +   F     +   E +W P++SKIKN +I 
Sbjct: 1634 ESPAVTPSFGLLEKRRVLCVDLQSEFWSSS---FEDPLESQMLEAKWRPVLSKIKNVLIF 1690

Query: 214  KKAFEEDLETATTLFRSCYNFYKDTLCAMLLS 309
             K  EE+LE A  L +SCYNF+++T    L S
Sbjct: 1691 NKVLEENLEIANALLKSCYNFFRETASVTLPS 1722



 Score = 42.7 bits (99), Expect(2) = 5e-12
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 308  QLILWAYTLLHGHYTSISVVIKYCEE 385
            +L+LWAYTL+HGH  SIS V+KY EE
Sbjct: 1755 KLLLWAYTLVHGHCGSISQVVKYMEE 1780


>tpg|DAA50705.1| TPA: hypothetical protein ZEAMMB73_867388 [Zea mays]
          Length = 561

 Score = 48.1 bits (113), Expect(2) = 4e-11
 Identities = 19/43 (44%), Positives = 31/43 (72%)
 Frame = +1

Query: 166 EMQWNPLVSKIKNFIIKKAFEEDLETATTLFRSCYNFYKDTLC 294
           +M W   +++IKN  +K+  E++LETA TL +S YNFY+++ C
Sbjct: 351 DMNWFETLNRIKNIPVKQTSEDNLETAVTLMKSTYNFYRESPC 393



 Score = 44.3 bits (103), Expect(2) = 4e-11
 Identities = 16/26 (61%), Positives = 23/26 (88%)
 Frame = +2

Query: 308 QLILWAYTLLHGHYTSISVVIKYCEE 385
           +L+LW YTL+HG Y++IS V+KYC+E
Sbjct: 432 KLLLWVYTLVHGRYSNISSVVKYCDE 457


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