BLASTX nr result

ID: Bupleurum21_contig00013806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013806
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53190.1| JMS09K11.8 [Jatropha curcas]                          415   e-113
ref|XP_002284617.1| PREDICTED: uncharacterized protein LOC100250...   414   e-113
ref|XP_004161171.1| PREDICTED: uncharacterized protein LOC101225...   412   e-113
ref|XP_002893178.1| hypothetical protein ARALYDRAFT_472396 [Arab...   412   e-112
ref|NP_564144.1| plastid transcriptionally active 6 [Arabidopsis...   409   e-112

>dbj|BAJ53190.1| JMS09K11.8 [Jatropha curcas]
          Length = 332

 Score =  415 bits (1067), Expect = e-113
 Identities = 200/229 (87%), Positives = 216/229 (94%), Gaps = 1/229 (0%)
 Frame = -2

Query: 969 VNGDE-IAMVDSKSFVYTQGWDSEKIVDYRINEDEFHKISLLDCDFFIRKPPDMDNDVYD 793
           V GDE IAMV SKSFV TQGWDSEKIVDYRI+E+EFHKISLLDCDFFIRKPPD DNDVYD
Sbjct: 104 VGGDEDIAMVISKSFVSTQGWDSEKIVDYRIDEEEFHKISLLDCDFFIRKPPDPDNDVYD 163

Query: 792 FREMYVTPPDTDIYAIPRVLAPMPQKYIRCALSDYGCYDVTEPPIDAPRDPMYKSVREVA 613
           FREMYVTPPDTDIYAIP+VLAPMPQKYIRCA+SDYG Y+VTEPPIDAPRDP+YKS RE+ 
Sbjct: 164 FREMYVTPPDTDIYAIPKVLAPMPQKYIRCAMSDYGRYNVTEPPIDAPRDPLYKSEREIL 223

Query: 612 KVFLTKHYRNRRLGDPEFVLDFEEIYVIDSKTKSITRARVLVTVPEGRDRDRKEDLLIIR 433
           KVFLTKHYRNRR GDPEFVLDFEEIYVIDSKTKSITRA+V+VTVP GR+RDRK DLL+IR
Sbjct: 224 KVFLTKHYRNRRFGDPEFVLDFEEIYVIDSKTKSITRAKVVVTVPGGRNRDRKSDLLVIR 283

Query: 432 DNGNSFKIIPSSERDDPTTVIEKEEWDKTRQDMERHLRKLRDFSVSNWF 286
           DNGN+FKII +SE+DDPTTVIE+EEW KTRQ+MERHLRKLRDFSVSNWF
Sbjct: 284 DNGNTFKIIHASEKDDPTTVIEREEWAKTRQEMERHLRKLRDFSVSNWF 332


>ref|XP_002284617.1| PREDICTED: uncharacterized protein LOC100250482 [Vitis vinifera]
          Length = 333

 Score =  414 bits (1063), Expect = e-113
 Identities = 195/225 (86%), Positives = 209/225 (92%)
 Frame = -2

Query: 960 DEIAMVDSKSFVYTQGWDSEKIVDYRINEDEFHKISLLDCDFFIRKPPDMDNDVYDFREM 781
           D+IAMV SKSFV  QGWDSE +VDYRINEDEFHKISL DCDFFIRKPPD DNDVYDFREM
Sbjct: 109 DDIAMVQSKSFVSIQGWDSEMVVDYRINEDEFHKISLFDCDFFIRKPPDPDNDVYDFREM 168

Query: 780 YVTPPDTDIYAIPRVLAPMPQKYIRCALSDYGCYDVTEPPIDAPRDPMYKSVREVAKVFL 601
           YVTPPDTD+YAIPRVLAPMPQKYIRCA SDYGCYDVTEPPIDAPRDP+YKS REV KVFL
Sbjct: 169 YVTPPDTDVYAIPRVLAPMPQKYIRCAKSDYGCYDVTEPPIDAPRDPLYKSEREVWKVFL 228

Query: 600 TKHYRNRRLGDPEFVLDFEEIYVIDSKTKSITRARVLVTVPEGRDRDRKEDLLIIRDNGN 421
           TKHYRNRRL DPEFVLDFEEIYVIDSKTKSITRA+V+VT P GR+RDRK DLL+IRD GN
Sbjct: 229 TKHYRNRRLADPEFVLDFEEIYVIDSKTKSITRAKVVVTAPGGRNRDRKSDLLVIRDKGN 288

Query: 420 SFKIIPSSERDDPTTVIEKEEWDKTRQDMERHLRKLRDFSVSNWF 286
           SFKII +SE+DDPTTVIE+EEW K+R+DMERHLRKLRDFS+SNWF
Sbjct: 289 SFKIIHASEKDDPTTVIEREEWTKSREDMERHLRKLRDFSISNWF 333


>ref|XP_004161171.1| PREDICTED: uncharacterized protein LOC101225304 [Cucumis sativus]
          Length = 337

 Score =  412 bits (1060), Expect = e-113
 Identities = 197/227 (86%), Positives = 213/227 (93%), Gaps = 1/227 (0%)
 Frame = -2

Query: 963 GDE-IAMVDSKSFVYTQGWDSEKIVDYRINEDEFHKISLLDCDFFIRKPPDMDNDVYDFR 787
           GDE I++V SKSFV TQGWDSE IVDYRINE+EFHKISLL CDFFIRKPPD D+DVYDFR
Sbjct: 111 GDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDSDVYDFR 170

Query: 786 EMYVTPPDTDIYAIPRVLAPMPQKYIRCALSDYGCYDVTEPPIDAPRDPMYKSVREVAKV 607
           EMYVTPPDTD+YAIP+VLAPMPQKYIRCA SDYGCY+VTEPPID+PRDP+YKS +EV KV
Sbjct: 171 EMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDSPRDPLYKSEKEVLKV 230

Query: 606 FLTKHYRNRRLGDPEFVLDFEEIYVIDSKTKSITRARVLVTVPEGRDRDRKEDLLIIRDN 427
           FLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVP GRDRDR+ DLL++RDN
Sbjct: 231 FLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDN 290

Query: 426 GNSFKIIPSSERDDPTTVIEKEEWDKTRQDMERHLRKLRDFSVSNWF 286
           GNSFKII SSERDDPTTVIEKEEW KTRQDMERHLRKLRDFS+SNWF
Sbjct: 291 GNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 337


>ref|XP_002893178.1| hypothetical protein ARALYDRAFT_472396 [Arabidopsis lyrata subsp.
           lyrata] gi|297339020|gb|EFH69437.1| hypothetical protein
           ARALYDRAFT_472396 [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score =  412 bits (1058), Expect = e-112
 Identities = 198/241 (82%), Positives = 214/241 (88%), Gaps = 9/241 (3%)
 Frame = -2

Query: 981 YEPLV--------NGD-EIAMVDSKSFVYTQGWDSEKIVDYRINEDEFHKISLLDCDFFI 829
           Y+PL          GD +IA V SKSF+ TQGWDSE +VDYRINEDEFHKISL+DCDFFI
Sbjct: 88  YDPLAAAMAAAGGGGDGDIAFVQSKSFISTQGWDSEMVVDYRINEDEFHKISLMDCDFFI 147

Query: 828 RKPPDMDNDVYDFREMYVTPPDTDIYAIPRVLAPMPQKYIRCALSDYGCYDVTEPPIDAP 649
           RKPPD DNDVYDFREMYVTPPDTDIY+IPRVLAPMPQKYIRCA+SDYGCY+VTEPPIDAP
Sbjct: 148 RKPPDPDNDVYDFREMYVTPPDTDIYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAP 207

Query: 648 RDPMYKSVREVAKVFLTKHYRNRRLGDPEFVLDFEEIYVIDSKTKSITRARVLVTVPEGR 469
           RDP+YKS RE++KVFLTKHYRNRR  DPEFVLD EEIYVIDSKTKSITRARVLVTVP GR
Sbjct: 208 RDPLYKSEREISKVFLTKHYRNRRTNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGR 267

Query: 468 DRDRKEDLLIIRDNGNSFKIIPSSERDDPTTVIEKEEWDKTRQDMERHLRKLRDFSVSNW 289
            RDRK+DLL+IRDNG SFKII   ERDDPTTVIE+EEW KTR+DME+HLRKLRDFSVSNW
Sbjct: 268 KRDRKDDLLVIRDNGTSFKIIHVGERDDPTTVIEREEWSKTREDMEKHLRKLRDFSVSNW 327

Query: 288 F 286
           F
Sbjct: 328 F 328


>ref|NP_564144.1| plastid transcriptionally active 6 [Arabidopsis thaliana]
           gi|79318316|ref|NP_001031076.1| plastid
           transcriptionally active 6 [Arabidopsis thaliana]
           gi|5263310|gb|AAD41412.1|AC007727_1 EST gb|N95925 comes
           from this gene [Arabidopsis thaliana]
           gi|11692926|gb|AAG40066.1|AF324715_1 At1g21600
           [Arabidopsis thaliana]
           gi|11908094|gb|AAG41476.1|AF326894_1 unknown protein
           [Arabidopsis thaliana]
           gi|17386146|gb|AAL38619.1|AF446886_1 At1g21600/F24J8.10
           [Arabidopsis thaliana] gi|15450597|gb|AAK96570.1|
           At1g21600/F24J8.10 [Arabidopsis thaliana]
           gi|21280837|gb|AAM44921.1| unknown protein [Arabidopsis
           thaliana] gi|222423451|dbj|BAH19696.1| AT1G21600
           [Arabidopsis thaliana] gi|332192001|gb|AEE30122.1|
           plastid transcriptionally active 6 [Arabidopsis
           thaliana] gi|332192002|gb|AEE30123.1| plastid
           transcriptionally active 6 [Arabidopsis thaliana]
          Length = 328

 Score =  409 bits (1052), Expect = e-112
 Identities = 196/241 (81%), Positives = 214/241 (88%), Gaps = 9/241 (3%)
 Frame = -2

Query: 981 YEPLV--------NGD-EIAMVDSKSFVYTQGWDSEKIVDYRINEDEFHKISLLDCDFFI 829
           Y+PL          GD +IA V SKSF+ TQGWDS+ +VDYRINEDEFHK+SL+DCDFFI
Sbjct: 88  YDPLAAAIAAAGGGGDGDIAFVQSKSFISTQGWDSDMVVDYRINEDEFHKLSLMDCDFFI 147

Query: 828 RKPPDMDNDVYDFREMYVTPPDTDIYAIPRVLAPMPQKYIRCALSDYGCYDVTEPPIDAP 649
           RKPPD DNDVYDFREMYVTPPDTDIY+IPRVLAPMPQKYIRCA+SDYGCY+VTEPPIDAP
Sbjct: 148 RKPPDPDNDVYDFREMYVTPPDTDIYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAP 207

Query: 648 RDPMYKSVREVAKVFLTKHYRNRRLGDPEFVLDFEEIYVIDSKTKSITRARVLVTVPEGR 469
           RDP+YKS RE++KVFLTKHYRNRR  DPEFVLD EEIYVIDSKTKSITRARVLVTVP GR
Sbjct: 208 RDPLYKSEREISKVFLTKHYRNRRTNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGR 267

Query: 468 DRDRKEDLLIIRDNGNSFKIIPSSERDDPTTVIEKEEWDKTRQDMERHLRKLRDFSVSNW 289
            RDRK+DLL+IRDNG SFKII   ERDDPTTVIE+EEW KTR+DME+HLRKLRDFSVSNW
Sbjct: 268 KRDRKDDLLVIRDNGTSFKIIHVGERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNW 327

Query: 288 F 286
           F
Sbjct: 328 F 328


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