BLASTX nr result

ID: Bupleurum21_contig00013791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013791
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520196.1| conserved hypothetical protein [Ricinus comm...   127   1e-27
ref|XP_002311786.1| SIN3 component, histone deacetylase complex ...   126   3e-27
gb|ADL36860.1| WRKY domain class transcription factor [Malus x d...   126   4e-27
ref|XP_002314629.1| SIN3 component, histone deacetylase complex ...   126   4e-27
ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein ...   122   8e-26

>ref|XP_002520196.1| conserved hypothetical protein [Ricinus communis]
           gi|223540688|gb|EEF42251.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1452

 Score =  127 bits (320), Expect = 1e-27
 Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 9/160 (5%)
 Frame = -3

Query: 640 YSDFINLLLEYKQKRLTTAEVIDRMKLLFSRHQELIEGFKQFLPAGYKIDLP-----PPT 476
           Y DF+ ++ ++K +R+ TA VI R+K LF  H++LI GF  FLP GY+I LP     PP 
Sbjct: 87  YDDFLEVMKDFKAQRIDTAGVIARVKDLFKGHRDLILGFNTFLPKGYEITLPLEDEQPPQ 146

Query: 475 RSEISFEEAVSYVNKVKRAFSQEQERYDSFLQVLQGYRRSEIGMQEVSQKVSEIFRDRQD 296
           +  + FEEA+++VNK+K  F  +   Y SFL +L  YR+    + EV Q+V+ +F+D  D
Sbjct: 147 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVATLFQDHND 206

Query: 295 LLKEFFKFVPDSQKETFRH----VMNNVIKDESTTNMTMK 188
           LL EF  F+PDS      H    V N++ +D S+   TM+
Sbjct: 207 LLMEFTHFLPDSSATASAHYAPSVRNSIHRDRSSAMPTMR 246


>ref|XP_002311786.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
           gi|222851606|gb|EEE89153.1| SIN3 component, histone
           deacetylase complex [Populus trichocarpa]
          Length = 1343

 Score =  126 bits (317), Expect = 3e-27
 Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
 Frame = -3

Query: 640 YSDFINLLLEYKQKRLTTAEVIDRMKLLFSRHQELIEGFKQFLPAGYKIDLP-----PPT 476
           Y DF+ ++ ++K +R+ TA VI R+K LF  H++LI GF  FLP GY+I LP     PP 
Sbjct: 33  YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEEEQPPQ 92

Query: 475 RSEISFEEAVSYVNKVKRAFSQEQERYDSFLQVLQGYRRSEIGMQEVSQKVSEIFRDRQD 296
           +  + FEEA+++VNK+K  F  +   Y SFL +L  YR+    + EV Q+V+ +FRD  D
Sbjct: 93  KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSISEVYQEVAALFRDHHD 152

Query: 295 LLKEFFKFVPDSQ---KETFRHVMNNVIKDESTTNMTMK 188
           LL EF  F+PDS       F    N+  +D S+   TM+
Sbjct: 153 LLLEFTHFLPDSSAAASALFPSARNSAPRDRSSAMPTMR 191


>gb|ADL36860.1| WRKY domain class transcription factor [Malus x domestica]
          Length = 1419

 Score =  126 bits (316), Expect = 4e-27
 Identities = 65/159 (40%), Positives = 98/159 (61%), Gaps = 8/159 (5%)
 Frame = -3

Query: 640 YSDFINLLLEYKQKRLTTAEVIDRMKLLFSRHQELIEGFKQFLPAGYKIDLP------PP 479
           Y +F+ ++ ++K  R+ TA VI+R+K LF  H+ELI GF  FLP GY+I LP      PP
Sbjct: 66  YEEFLEVMKDFKATRIDTAGVIERVKDLFKGHRELILGFNTFLPKGYEITLPLDEDQQPP 125

Query: 478 TRSEISFEEAVSYVNKVKRAFSQEQERYDSFLQVLQGYRRSEIGMQEVSQKVSEIFRDRQ 299
            +  + FEEA+++VNK+K  F  +   Y SFL +L  YR+    +QEV Q+V+ +F+D  
Sbjct: 126 QKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIQEVYQEVAALFQDHA 185

Query: 298 DLLKEFFKFVPDSQKETFRHV--MNNVIKDESTTNMTMK 188
           DLL EF  F+PD+      H    N++++D S+   TM+
Sbjct: 186 DLLVEFTHFLPDTTGTASIHPPNRNSMLRDRSSAMPTMR 224


>ref|XP_002314629.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
           gi|222863669|gb|EEF00800.1| SIN3 component, histone
           deacetylase complex [Populus trichocarpa]
          Length = 1385

 Score =  126 bits (316), Expect = 4e-27
 Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
 Frame = -3

Query: 640 YSDFINLLLEYKQKRLTTAEVIDRMKLLFSRHQELIEGFKQFLPAGYKIDLP-----PPT 476
           Y +F+ ++ ++K +R+ TA VI R+K LF  H++LI GF  FLP GY+I LP     PP 
Sbjct: 37  YDEFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPQ 96

Query: 475 RSEISFEEAVSYVNKVKRAFSQEQERYDSFLQVLQGYRRSEIGMQEVSQKVSEIFRDRQD 296
           +  + FEEA+++VNK+K  F  +   Y SFL +L  YR+    + EV Q+V+ +FRD  D
Sbjct: 97  KKPVEFEEAINFVNKIKTRFQGDDRVYKSFLDILNLYRKENKSISEVYQEVASLFRDHHD 156

Query: 295 LLKEFFKFVPDSQKETFRHV---MNNVIKDESTTNMTMK 188
           LL EF  F+PDS      H     N  ++D S+   TM+
Sbjct: 157 LLLEFTHFLPDSSAAASAHFPTGRNPALRDRSSAMPTMR 195


>ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1414

 Score =  122 bits (305), Expect = 8e-26
 Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 8/159 (5%)
 Frame = -3

Query: 640 YSDFINLLLEYKQKRLTTAEVIDRMKLLFSRHQELIEGFKQFLPAGYKIDLP-----PPT 476
           Y DF+ ++ ++K +R+ T  VI R+K LF  H++LI GF  FLP GY+I LP     P  
Sbjct: 63  YDDFLEVMKDFKAQRIDTVGVIARVKELFKGHRDLILGFNTFLPKGYEITLPSEDDQPAP 122

Query: 475 RSEISFEEAVSYVNKVKRAFSQEQERYDSFLQVLQGYRRSEIGMQEVSQKVSEIFRDRQD 296
           +  + FEEA+++VNK+K  F  +   Y SFL +L  YR+ +  + EV Q+V+ IF+D  D
Sbjct: 123 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEDKSITEVYQEVAAIFQDHPD 182

Query: 295 LLKEFFKFVPDSQKETFRH---VMNNVIKDESTTNMTMK 188
           LL EF  F+PD+      H     N++++D S+   T++
Sbjct: 183 LLDEFTHFLPDASAAASTHYASARNSMLRDRSSAMPTIR 221


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