BLASTX nr result

ID: Bupleurum21_contig00013778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013778
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]       92   4e-17
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]    92   4e-17
ref|XP_002515093.1| conserved hypothetical protein [Ricinus comm...    88   6e-16
gb|AFA35964.1| late elongated hypocotyl [Nicotiana attenuata]          88   8e-16
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]              87   2e-15

>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 57/124 (45%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
 Frame = -3

Query: 355 RGRVCTSLNESWKEVSQGGRLAFQALFSREVLPQSFASP------GYHQKYSFEKDKQHA 194
           R R  + LNESWKEVS+ GRLAF+ALFSREVLPQSF+ P      G   K  F +++Q  
Sbjct: 617 RCRSTSILNESWKEVSEEGRLAFRALFSREVLPQSFSPPHDLKNKGLQNK-DFIENEQGG 675

Query: 193 HQEEGERVQFDMNSKACGTGLSDKYVDHNVSLSNENNXXXXXXXXXXXXLKFKSRRTGFK 14
            ++    +Q D+NSKA G   S + V+ N  + N+N              K K RRTGFK
Sbjct: 676 DEKHENALQLDLNSKAWGPCSSHQDVEKNGLMENDNR-EEGLLTIGLGYGKIKGRRTGFK 734

Query: 13  PYKR 2
           PYKR
Sbjct: 735 PYKR 738


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 57/124 (45%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
 Frame = -3

Query: 355  RGRVCTSLNESWKEVSQGGRLAFQALFSREVLPQSFASP------GYHQKYSFEKDKQHA 194
            R R  + LNESWKEVS+ GRLAF+ALFSREVLPQSF+ P      G   K  F +++Q  
Sbjct: 703  RCRSTSILNESWKEVSEEGRLAFRALFSREVLPQSFSPPHDLKNKGLQNK-DFIENEQGG 761

Query: 193  HQEEGERVQFDMNSKACGTGLSDKYVDHNVSLSNENNXXXXXXXXXXXXLKFKSRRTGFK 14
             ++    +Q D+NSKA G   S + V+ N  + N+N              K K RRTGFK
Sbjct: 762  DEKHENALQLDLNSKAWGPCSSHQDVEKNGLMENDNR-EEGLLTIGLGYGKIKGRRTGFK 820

Query: 13   PYKR 2
            PYKR
Sbjct: 821  PYKR 824


>ref|XP_002515093.1| conserved hypothetical protein [Ricinus communis]
           gi|223545573|gb|EEF47077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 768

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 52/123 (42%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
 Frame = -3

Query: 355 RGRVCTSLNESWKEVSQGGRLAFQALFSREVLPQSFASPGY-----HQKYSFEKDKQHAH 191
           R R  +S+++SWKEVS+ GRLAFQALFSREVLPQSF+ P        QK   E+DKQ+  
Sbjct: 613 RSRSNSSISDSWKEVSEEGRLAFQALFSREVLPQSFSPPHVLKNEARQKDEIEEDKQNTV 672

Query: 190 QEEGERVQFDMNSKACGTGLSDKYVDHNVSLSNENNXXXXXXXXXXXXLKFKSRRTGFKP 11
           ++    +   +N    G   S +  +       ENN             K K+RRTGFKP
Sbjct: 673 EKNENALLLSLNGNISGFCTSHQEAEKIEMPRCENNGEDGLLTFGLGHGKLKARRTGFKP 732

Query: 10  YKR 2
           YKR
Sbjct: 733 YKR 735


>gb|AFA35964.1| late elongated hypocotyl [Nicotiana attenuata]
          Length = 767

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
 Frame = -3

Query: 355 RGRVCTSLNESWKEVSQGGRLAFQALFSREVLPQSFA---SPGYHQKYSFEKDKQHAHQE 185
           RGR C S N+SWKEVS+GGR+AFQALF+RE LPQSF+    P      + E  KQ   ++
Sbjct: 613 RGRNCISPNDSWKEVSEGGRIAFQALFTREKLPQSFSPSNDPKNKGTINLENVKQKPDEK 672

Query: 184 EGERVQFDMNSKACGTGLSDKYVDHNV-SLSNENNXXXXXXXXXXXXLKFKSRRTGFKPY 8
                Q D+N +A     S + V+ NV  + N+ +             + K+RRTGFKPY
Sbjct: 673 GLSGSQLDLNDQASDICSSHQAVEDNVLVIGNKEDAEKCLPMMELGQGRLKARRTGFKPY 732

Query: 7   KR 2
           KR
Sbjct: 733 KR 734


>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/116 (43%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
 Frame = -3

Query: 334 LNESWKEVSQGGRLAFQALFSREVLPQSFASPG-----YHQKYSFEKDKQHAHQEEGERV 170
           +N+SWK VS+ GRLAFQALFSREVLPQSF+ P       +QK +   DKQ+A++ +G   
Sbjct: 624 MNDSWKSVSEEGRLAFQALFSREVLPQSFSPPHDLKNMGNQKDNTTDDKQNANENDGNAS 683

Query: 169 QFDMNSKACGTGLSDKYVDHNVSLSNENNXXXXXXXXXXXXLKFKSRRTGFKPYKR 2
             D+NS+  G+      V   +     NN             K K+RRTGFKPYKR
Sbjct: 684 LLDLNSQKSGS----CSVQQGILNFEPNNNGEGLLTIGLAYGKLKARRTGFKPYKR 735


Top