BLASTX nr result

ID: Bupleurum21_contig00013777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013777
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]       75   5e-12
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]    75   5e-12
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]              70   1e-10
ref|XP_002515093.1| conserved hypothetical protein [Ricinus comm...    69   4e-10
ref|NP_001236400.1| MYB transcription factor MYB114 [Glycine max...    67   2e-09

>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
 Frame = -3

Query: 281 GRLAFQALFSREVLPQSFASP------GYHQKYSFEKDKQHAHQEEGERLQFDMNSKACG 120
           GRLAF+ALFSREVLPQSF+ P      G   K  F +++Q   ++    LQ D+NSKA G
Sbjct: 635 GRLAFRALFSREVLPQSFSPPHDLKNKGLQNK-DFIENEQGGDEKHENALQLDLNSKAWG 693

Query: 119 TGLSDTYVDHNVSLSNENNEREGMLTMGIGGLKFKSRRT 3
              S   V+ N  + N+N E EG+LT+G+G  K K RRT
Sbjct: 694 PCSSHQDVEKNGLMENDNRE-EGLLTIGLGYGKIKGRRT 731


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
 Frame = -3

Query: 281  GRLAFQALFSREVLPQSFASP------GYHQKYSFEKDKQHAHQEEGERLQFDMNSKACG 120
            GRLAF+ALFSREVLPQSF+ P      G   K  F +++Q   ++    LQ D+NSKA G
Sbjct: 721  GRLAFRALFSREVLPQSFSPPHDLKNKGLQNK-DFIENEQGGDEKHENALQLDLNSKAWG 779

Query: 119  TGLSDTYVDHNVSLSNENNEREGMLTMGIGGLKFKSRRT 3
               S   V+ N  + N+N E EG+LT+G+G  K K RRT
Sbjct: 780  PCSSHQDVEKNGLMENDNRE-EGLLTIGLGYGKIKGRRT 817


>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
 Frame = -3

Query: 281 GRLAFQALFSREVLPQSFASPG-----YHQKYSFEKDKQHAHQEEGERLQFDMNSKACGT 117
           GRLAFQALFSREVLPQSF+ P       +QK +   DKQ+A++ +G     D+NS+  G+
Sbjct: 635 GRLAFQALFSREVLPQSFSPPHDLKNMGNQKDNTTDDKQNANENDGNASLLDLNSQKSGS 694

Query: 116 GLSDTYVDHNVSLSNENNEREGMLTMGIGGLKFKSRRT 3
                 V   +     NN  EG+LT+G+   K K+RRT
Sbjct: 695 ----CSVQQGILNFEPNNNGEGLLTIGLAYGKLKARRT 728


>ref|XP_002515093.1| conserved hypothetical protein [Ricinus communis]
           gi|223545573|gb|EEF47077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 768

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
 Frame = -3

Query: 281 GRLAFQALFSREVLPQSFASPGY-----HQKYSFEKDKQHAHQEEGERLQFDMNSKACGT 117
           GRLAFQALFSREVLPQSF+ P        QK   E+DKQ+  ++    L   +N    G 
Sbjct: 631 GRLAFQALFSREVLPQSFSPPHVLKNEARQKDEIEEDKQNTVEKNENALLLSLNGNISGF 690

Query: 116 GLSDTYVDHNVSLSNENNEREGMLTMGIGGLKFKSRRT 3
             S    +       ENN  +G+LT G+G  K K+RRT
Sbjct: 691 CTSHQEAEKIEMPRCENNGEDGLLTFGLGHGKLKARRT 728


>ref|NP_001236400.1| MYB transcription factor MYB114 [Glycine max]
           gi|158999370|gb|ABW87009.1| late elongated hypocotyl and
           circadian clock associated-1-like protein 2 [Glycine
           max]
          Length = 748

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/97 (46%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
 Frame = -3

Query: 281 GRLAFQALFSREVLPQSFASPGYHQKYSFEKDKQHAHQEEGE----RLQFDMNSKACGTG 114
           GRLAFQALFSREVLPQSF SP +H      KD Q    ++ E        D+ SK C + 
Sbjct: 618 GRLAFQALFSREVLPQSF-SPTHH---LINKDNQIDSIKDNELNTDYKDEDLESKKCSSI 673

Query: 113 LSDTYVDHNVSLSNENNEREGMLTMGIGGLKFKSRRT 3
                V  N+    +NNE EG+LT+G+G  K K+RRT
Sbjct: 674 CDG--VQKNLLFVKDNNEEEGLLTIGLGPGKLKTRRT 708


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