BLASTX nr result

ID: Bupleurum21_contig00013774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013774
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298235.1| predicted protein [Populus trichocarpa] gi|2...   172   9e-63
ref|XP_002515996.1| conserved hypothetical protein [Ricinus comm...   167   4e-61
emb|CAN70334.1| hypothetical protein VITISV_011432 [Vitis vinifera]   164   7e-58
ref|XP_002284183.1| PREDICTED: VHS domain-containing protein At3...   164   7e-58
ref|XP_003530129.1| PREDICTED: VHS domain-containing protein At3...   149   3e-45

>ref|XP_002298235.1| predicted protein [Populus trichocarpa] gi|222845493|gb|EEE83040.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  172 bits (436), Expect(2) = 9e-63
 Identities = 91/188 (48%), Positives = 120/188 (63%), Gaps = 1/188 (0%)
 Frame = +2

Query: 2   ETNKDDDPFADVSFHTNNDKEHVDDIFSGMTTDNY-GAGGTHLTSTQNGDELFDIFGSNS 178
           E  K++DPFADVSFHT+  +EH DD+FSGMT D+  GA   H+ + +NG ELFDIFGSNS
Sbjct: 451 EEQKNEDPFADVSFHTSEGREHGDDLFSGMTFDDKPGADENHMPANENGPELFDIFGSNS 510

Query: 179 DTSVVHANNNKDVNDLMSTLSIKEKDVKQNGTSSELLSEKIFTISGTNLNNQITNDTIDK 358
           +      N+   V+ LM+++SI +   K   TS  + SE +F+   +N ++Q+TND ++ 
Sbjct: 511 EFLKGQENSETGVSGLMASMSINDNVSKLQVTSPAVFSESLFSDLTSNPSHQVTNDALNG 570

Query: 359 IYGSQTAGISTNPMFPGGTGLSTTTMFPVGTVPYNLSPGLMFNPASPSQPINYAAMGNLL 538
             G    GI+ NP+ P             GTVPYN+ PG+M NPA  SQPINYAAMGN L
Sbjct: 571 SLGLSATGINVNPLHPS------------GTVPYNMHPGIMLNPAFHSQPINYAAMGNFL 618

Query: 539 AQQHFLAT 562
           AQQ FLAT
Sbjct: 619 AQQQFLAT 626



 Score = 95.1 bits (235), Expect(2) = 9e-63
 Identities = 45/64 (70%), Positives = 52/64 (81%)
 Frame = +1

Query: 667 QNYGLSQALETQGGGYSSALADVFNSGHPSQTPTSVMSSSKKEETRAFDFISDHLAAVRD 846
           QN G+S A  T GGGYSSAL D+F S  P+Q PTS M+SSKKE+TRAFDFISDH+AA RD
Sbjct: 639 QNAGVSHASGTDGGGYSSALPDIFQSNFPNQAPTSTMNSSKKEDTRAFDFISDHVAAARD 698

Query: 847 PKKV 858
           PK+V
Sbjct: 699 PKRV 702


>ref|XP_002515996.1| conserved hypothetical protein [Ricinus communis]
           gi|223544901|gb|EEF46416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 699

 Score =  167 bits (424), Expect(2) = 4e-61
 Identities = 92/190 (48%), Positives = 115/190 (60%), Gaps = 3/190 (1%)
 Frame = +2

Query: 2   ETNKDDDPFADVSFHTNNDKEHVDDIFSGMTTDNY-GAGGTHLTSTQNGDELFDIFGSNS 178
           E   DDDPFADVSFHT+  +EH DD+FSGMT D+  G    HL + +N  E FDIFGSNS
Sbjct: 445 EQKNDDDPFADVSFHTSESREHGDDLFSGMTIDSKPGTNENHLPTNKNVSEPFDIFGSNS 504

Query: 179 DTSVVHANNNKDVNDLMSTLSIKEK--DVKQNGTSSELLSEKIFTISGTNLNNQITNDTI 352
           +  +   N   DVNDLMS +SI E     KQ  T++  L E IF+ S  +  +Q +ND +
Sbjct: 505 ELPLEQENYKTDVNDLMSGMSINENVSKSKQPDTAAGGLPENIFSDSSNHSGHQSSNDAL 564

Query: 353 DKIYGSQTAGISTNPMFPGGTGLSTTTMFPVGTVPYNLSPGLMFNPASPSQPINYAAMGN 532
             I GSQ   ++ NPMFP GT            +PYN+ PG+M N A  +QPINY AMGN
Sbjct: 565 TSILGSQATAMNLNPMFPSGT------------MPYNIPPGIMLNTAFQTQPINYGAMGN 612

Query: 533 LLAQQHFLAT 562
            LA Q FLA+
Sbjct: 613 FLAHQQFLAS 622



 Score = 94.4 bits (233), Expect(2) = 4e-61
 Identities = 43/64 (67%), Positives = 53/64 (82%)
 Frame = +1

Query: 667 QNYGLSQALETQGGGYSSALADVFNSGHPSQTPTSVMSSSKKEETRAFDFISDHLAAVRD 846
           QN G+  A+ T GGGYSSAL D+F   +P+Q PTS+M++SKKE+TRAFDFISDHLAA RD
Sbjct: 635 QNPGVDPAVGTNGGGYSSALPDIFQPNYPNQAPTSIMNNSKKEDTRAFDFISDHLAAARD 694

Query: 847 PKKV 858
           PK+V
Sbjct: 695 PKRV 698


>emb|CAN70334.1| hypothetical protein VITISV_011432 [Vitis vinifera]
          Length = 1694

 Score =  164 bits (416), Expect(2) = 7e-58
 Identities = 91/189 (48%), Positives = 118/189 (62%), Gaps = 3/189 (1%)
 Frame = +2

Query: 2    ETNKDDDPFADVSFHTNNDKEHVDDIFSGMTTDN-YGAGGTHLTSTQNGDELFDIFGSNS 178
            E   DDDPFADVSF +   +E VDD+FSGMT D+  GA      +T N  ELFDIFGSN+
Sbjct: 1441 EQKNDDDPFADVSFLSGEAREQVDDLFSGMTVDDKVGANEIPKAATSNEPELFDIFGSNA 1500

Query: 179  DTSVVHANNNKDVNDLMSTLSIKEK--DVKQNGTSSELLSEKIFTISGTNLNNQITNDTI 352
            +      N+ KDVNDLM+ LSI     +  Q G     LSE +F+ S +    Q++ND +
Sbjct: 1501 ELPQEQENHKKDVNDLMAGLSINGNVSNTTQKGMLPGALSEXVFSDSNSYSPKQVSNDAL 1560

Query: 353  DKIYGSQTAGISTNPMFPGGTGLSTTTMFPVGTVPYNLSPGLMFNPASPSQPINYAAMGN 532
            +  +GS+TAG++ N             MFP+G++PYN+ PG+MFNPA PSQP+NY AMGN
Sbjct: 1561 NG-FGSETAGMNAN------------AMFPLGSMPYNIPPGIMFNPAFPSQPMNYGAMGN 1607

Query: 533  LLAQQHFLA 559
              AQQ FLA
Sbjct: 1608 FFAQQQFLA 1616



 Score = 86.7 bits (213), Expect(2) = 7e-58
 Identities = 42/65 (64%), Positives = 52/65 (80%)
 Frame = +1

Query: 667  QNYGLSQALETQGGGYSSALADVFNSGHPSQTPTSVMSSSKKEETRAFDFISDHLAAVRD 846
            Q+ G+  A  T  GGYSS L D+F+   P+Q+PT+VM+SSKKEET+AFDFISDHLAA RD
Sbjct: 1630 QSAGMGHAGGTMEGGYSSPLPDIFHPHIPTQSPTAVMTSSKKEETKAFDFISDHLAAARD 1689

Query: 847  PKKVI 861
            PK+VI
Sbjct: 1690 PKRVI 1694


>ref|XP_002284183.1| PREDICTED: VHS domain-containing protein At3g16270 [Vitis vinifera]
           gi|297743233|emb|CBI36100.3| unnamed protein product
           [Vitis vinifera]
          Length = 709

 Score =  164 bits (416), Expect(2) = 7e-58
 Identities = 91/189 (48%), Positives = 118/189 (62%), Gaps = 3/189 (1%)
 Frame = +2

Query: 2   ETNKDDDPFADVSFHTNNDKEHVDDIFSGMTTDN-YGAGGTHLTSTQNGDELFDIFGSNS 178
           E   DDDPFADVSF +   +E VDD+FSGMT D+  GA      +T N  ELFDIFGSN+
Sbjct: 456 EQKNDDDPFADVSFLSGEAREQVDDLFSGMTVDDKVGANEIPKAATSNEPELFDIFGSNA 515

Query: 179 DTSVVHANNNKDVNDLMSTLSIKEK--DVKQNGTSSELLSEKIFTISGTNLNNQITNDTI 352
           +      N+ KDVNDLM+ LSI     +  Q G     LSE +F+ S +    Q++ND +
Sbjct: 516 ELPQEQENHKKDVNDLMAGLSINGNVSNTTQKGMLPGALSETVFSDSNSYSPKQVSNDAL 575

Query: 353 DKIYGSQTAGISTNPMFPGGTGLSTTTMFPVGTVPYNLSPGLMFNPASPSQPINYAAMGN 532
           +  +GS+TAG++ N             MFP+G++PYN+ PG+MFNPA PSQP+NY AMGN
Sbjct: 576 NG-FGSETAGMNAN------------AMFPLGSMPYNIPPGIMFNPAFPSQPMNYGAMGN 622

Query: 533 LLAQQHFLA 559
             AQQ FLA
Sbjct: 623 FFAQQQFLA 631



 Score = 86.7 bits (213), Expect(2) = 7e-58
 Identities = 42/65 (64%), Positives = 52/65 (80%)
 Frame = +1

Query: 667 QNYGLSQALETQGGGYSSALADVFNSGHPSQTPTSVMSSSKKEETRAFDFISDHLAAVRD 846
           Q+ G+  A  T  GGYSS L D+F+   P+Q+PT+VM+SSKKEET+AFDFISDHLAA RD
Sbjct: 645 QSAGMGHAGGTMEGGYSSPLPDIFHPHIPTQSPTAVMTSSKKEETKAFDFISDHLAAARD 704

Query: 847 PKKVI 861
           PK+VI
Sbjct: 705 PKRVI 709


>ref|XP_003530129.1| PREDICTED: VHS domain-containing protein At3g16270-like [Glycine
           max]
          Length = 701

 Score =  149 bits (377), Expect(2) = 3e-45
 Identities = 87/188 (46%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
 Frame = +2

Query: 11  KDDDPFADVSFHTNNDKEHVDDIFSGMT--TDNYGAGGTHLTSTQNGDELFDIFGSNSDT 184
           K+DDPFADVSFHTN +KEH DD+FSGMT  ++  G   +H        +LFDIF SNS+ 
Sbjct: 460 KNDDPFADVSFHTNENKEHADDLFSGMTVGSNKQGDHESHRQGNITEPQLFDIFASNSE- 518

Query: 185 SVVHANNNKDVNDLMSTLSIKEK--DVKQNGTSSELLSEKIFTISGTNLNNQITNDTIDK 358
                N+ + V+DLM+ LS+ E     KQ GTS  + SE +F+     LNN I ++T   
Sbjct: 519 ---QGNHKEPVSDLMAGLSMDENTSSTKQKGTSPFMQSESLFS----GLNNHIPDNTSGG 571

Query: 359 IYGSQTAGISTNPMFPGGTGLSTTTMFPVGTVPYNLSPGLMFNPASPSQPINYAAMGNLL 538
           +  SQ  G + NPMFP             G +PYN+ PG M N    SQP+NY AMG LL
Sbjct: 572 MLSSQPMGFNVNPMFP------------TGPMPYNIQPGFMLNQPYSSQPLNYGAMGTLL 619

Query: 539 AQQHFLAT 562
           AQQ FLAT
Sbjct: 620 AQQQFLAT 627



 Score = 59.3 bits (142), Expect(2) = 3e-45
 Identities = 28/65 (43%), Positives = 46/65 (70%)
 Frame = +1

Query: 667 QNYGLSQALETQGGGYSSALADVFNSGHPSQTPTSVMSSSKKEETRAFDFISDHLAAVRD 846
           Q+ G++Q     G    S L D+F     +QTP+S++++S+KEET+AFDFISDH+++ RD
Sbjct: 640 QDDGVAQMAGPNG---RSPLPDIFQPNFQTQTPSSMINTSRKEETKAFDFISDHMSSARD 696

Query: 847 PKKVI 861
            +++I
Sbjct: 697 SRRMI 701


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