BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013737
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38005.1| putative polyprotein [Oryza sativa Japonica Group...   231   5e-59
gb|AAS01944.1| putative retrotransposon protein [Oryza sativa Ja...   229   2e-58
gb|ABB46939.2| retrotransposon protein, putative, Ty1-copia subc...   212   4e-53
gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subc...   207   7e-52
gb|AAM74293.1|AC083944_11 Putative transposable element [Oryza s...   207   1e-51

>gb|AAT38005.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|49328115|gb|AAT58813.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1198

 Score =  231 bits (590), Expect = 5e-59
 Identities = 110/222 (49%), Positives = 146/222 (65%), Gaps = 35/222 (15%)
 Frame = -2

Query: 563  DAMNSSESRHWKGAVKSEIDSIVSHGTWELVDLPPGSSTIGCKWIFKKKLNPDDSIDKYK 384
            +A  S ++ +WK AV+SE+DSI+++GTWE+ D P G   +GCKW+FKKKL PD +I+KYK
Sbjct: 730  EAYASPDADYWKEAVRSEMDSIIANGTWEMTDQPYGCKPVGCKWVFKKKLRPDGTIEKYK 789

Query: 383  ARLVAKGFRQREGIDYFDTYSPVARMTT-------------------------------- 300
            ARL+AKG+ Q+EG D+FDTYSPVAR+TT                                
Sbjct: 790  ARLIAKGYTQKEGEDFFDTYSPVARLTTIRPHMIFSFIKWTLRQLFLMELDEEIYMDQPD 849

Query: 299  ---ASGNERKVCKLIKSIYGLKQVPKDWHKELVSKVAPFGFIVNDSDKCLYYCVKGSDYI 129
                   E KVCKL+KS+YGLKQ PK WH++    +   GF VN++DKC+YY   G + +
Sbjct: 850  EFVVESQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSVGFAVNEADKCVYYRHGGGEGV 909

Query: 128  IMCVYVDDILLFGTNIEIINAAKTFLKANFDMKDMGEAKVIL 3
            I+C+YVDDIL+FGTN+E+IN  K+FL  NFDMKD+G A VIL
Sbjct: 910  ILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVIL 951


>gb|AAS01944.1| putative retrotransposon protein [Oryza sativa Japonica Group]
           gi|108709426|gb|ABF97221.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 710

 Score =  229 bits (584), Expect = 2e-58
 Identities = 107/214 (50%), Positives = 148/214 (69%), Gaps = 27/214 (12%)
 Frame = -2

Query: 563 DAMNSSESRHWKGAVKSEIDSIVSHGTWELVDLPPGSSTIGCKWIFKKKLNPDDSIDKYK 384
           +A +S ++ +WK AV+SE+DSI+S+GTWE+V+ P G   +GCKW+FKKKL PD +I+KYK
Sbjct: 290 EAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYK 349

Query: 383 ARLVAKGFRQREGIDYFDTYSPVARMTT---------------------------ASGNE 285
           ARLVAKG+ Q+EG D+FDTYSPVAR+TT                             G E
Sbjct: 350 ARLVAKGYTQKEGEDFFDTYSPVARLTTIRMDVKTAFLNGELEEEIYMDQPDGYVLEGQE 409

Query: 284 RKVCKLIKSIYGLKQVPKDWHKELVSKVAPFGFIVNDSDKCLYYCVKGSDYIIMCVYVDD 105
             VCKL+KS+YGLKQ PK WH++  + +   GF+VN++DKC+YY   G + +I+C+YVDD
Sbjct: 410 GMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGEGVILCLYVDD 469

Query: 104 ILLFGTNIEIINAAKTFLKANFDMKDMGEAKVIL 3
           IL+FGT++ +I   K +L  +F+MKD+GEA VIL
Sbjct: 470 ILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVIL 503


>gb|ABB46939.2| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1085

 Score =  212 bits (539), Expect = 4e-53
 Identities = 103/210 (49%), Positives = 141/210 (67%), Gaps = 23/210 (10%)
 Frame = -2

Query: 563  DAMNSSESRHWKGAVKSEIDSIVSHGTWELVDLPPGSSTIGCKWIFKKKLNPDDSIDKYK 384
            +A +S ++ +WK AV SE+DSI+S+GTWE+ + P G   +GCKW+FKKKL  D +I+KYK
Sbjct: 771  EAYSSLDADYWKEAVCSEMDSIMSNGTWEVAERPYGCKPVGCKWVFKKKLRSDGTIEKYK 830

Query: 383  ARLVAKGFRQREGIDYFDTYSPVARMTT-----------------------ASGNERKVC 273
            ARLVAKG+ Q+EG D+FDTYSPVAR+TT                         G E  VC
Sbjct: 831  ARLVAKGYTQKEGDDFFDTYSPVARLTTIRTAFLNGELEDEIYMDQPDGYVLEGQEGMVC 890

Query: 272  KLIKSIYGLKQVPKDWHKELVSKVAPFGFIVNDSDKCLYYCVKGSDYIIMCVYVDDILLF 93
            KL+KS+YGL Q  K WH++  + +   GFIVN++DKC+YY   G + +I+C+YVDDIL+F
Sbjct: 891  KLLKSLYGLIQELKQWHEKFDNTLTSAGFIVNEADKCVYYRYGGGEGVILCLYVDDILIF 950

Query: 92   GTNIEIINAAKTFLKANFDMKDMGEAKVIL 3
            GT++ +I   K FL  +F+MKD+  A VIL
Sbjct: 951  GTSLNVIGEVKDFLSKSFEMKDLEVADVIL 980


>gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1186

 Score =  207 bits (528), Expect = 7e-52
 Identities = 94/187 (50%), Positives = 135/187 (72%)
 Frame = -2

Query: 563  DAMNSSESRHWKGAVKSEIDSIVSHGTWELVDLPPGSSTIGCKWIFKKKLNPDDSIDKYK 384
            +A +S ++ +WK AV+SE+DSI+S+GTWE+V+ P G   +GCKW+FKKKL PD +I+KYK
Sbjct: 888  EAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYK 947

Query: 383  ARLVAKGFRQREGIDYFDTYSPVARMTTASGNERKVCKLIKSIYGLKQVPKDWHKELVSK 204
            ARLVAKG+ Q+E  D+FDTYSPVAR+TT                 ++Q PK WH++  + 
Sbjct: 948  ARLVAKGYTQKESEDFFDTYSPVARLTT-----------------IRQAPKQWHEKFDTT 990

Query: 203  VAPFGFIVNDSDKCLYYCVKGSDYIIMCVYVDDILLFGTNIEIINAAKTFLKANFDMKDM 24
            +   GF+VN++DKC+YY   G + +I+C+YVDDIL+FGT++ +I   K +L  +F+MKD+
Sbjct: 991  LTSAGFVVNEADKCVYYRYGGGEGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDL 1050

Query: 23   GEAKVIL 3
            GEA VIL
Sbjct: 1051 GEADVIL 1057


>gb|AAM74293.1|AC083944_11 Putative transposable element [Oryza sativa Japonica Group]
          Length = 1169

 Score =  207 bits (526), Expect = 1e-51
 Identities = 103/223 (46%), Positives = 141/223 (63%), Gaps = 36/223 (16%)
 Frame = -2

Query: 563  DAMNSSESRHWKGAVKSEIDSIVSHGTWELVDLPPGSSTIGCKWIFKKKLNPDDSIDKYK 384
            +A +S ++ +WK AV SE+DSI+S+GTWE+ + P G   +GCKW+FKKKL  D +I+KYK
Sbjct: 842  EAYSSLDADYWKEAVCSEMDSIMSNGTWEVAERPYGCKPVGCKWVFKKKLRSDGTIEKYK 901

Query: 383  ARLVAKGFRQREGIDYFDTYSPVARMTT-------------------------------- 300
            ARLVAKG+ Q+EG D+FDTYSPVAR+TT                                
Sbjct: 902  ARLVAKGYTQKEGDDFFDTYSPVARLTTIRPLMVYSSIRWMLKTAFLNGELEDEIYMDQP 961

Query: 299  ----ASGNERKVCKLIKSIYGLKQVPKDWHKELVSKVAPFGFIVNDSDKCLYYCVKGSDY 132
                  G E  VCKL+KS+YGL Q  K WH++  + +   GFIVN++DKC+YY   G + 
Sbjct: 962  DGYVLEGQEGMVCKLLKSLYGLIQELKQWHEKFDNTLTSAGFIVNEADKCVYYRYGGGEG 1021

Query: 131  IIMCVYVDDILLFGTNIEIINAAKTFLKANFDMKDMGEAKVIL 3
            +I+C+YVDDIL+FGT++ +I   K FL  +F+MKD+  A VIL
Sbjct: 1022 VILCLYVDDILIFGTSLNVIGEVKDFLSKSFEMKDLEVADVIL 1064