BLASTX nr result

ID: Bupleurum21_contig00013720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013720
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    75   6e-12
gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana ta...    69   7e-10

>ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 312

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 53/134 (39%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +3

Query: 6   NSCPVCRFKMPS-ESSSGGIKVXXXXXXFGNARFIGDDEFYGFGSTLRHIARRHRLVFPV 182
           NSCP+CRF++P+ E    G         FG+   + D E +G GSTLRHIARR+RLVFP 
Sbjct: 184 NSCPLCRFRLPTDEGEDSGDAGATVTMTFGD--LMEDHELFGLGSTLRHIARRNRLVFPA 241

Query: 183 SRRXXXXXXXXXXXXXXTMLMSPTQVAEAEMGALERENSVETVSSGWPSWPIDGEGGDQE 362
                               +S    A+A+  +L  +NSVETVSS WP   + G GG   
Sbjct: 242 --------------------LSAEGQAQAQGESLGPDNSVETVSS-WPRQVLVGGGG--- 277

Query: 363 VGASGRGNDGTGAV 404
            G  G  + G GAV
Sbjct: 278 -GGGGDADFGAGAV 290


>gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana tabacum]
          Length = 302

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 47/137 (34%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
 Frame = +3

Query: 3   HNSCPVCRFKMPSESSSGGIKVXXXXXXFGNARF----IGDDEFYGFGSTLRHIARRHRL 170
           +NSCPVCRFK+P+E       +       G  R       +++ +GF  TLR +ARRH+L
Sbjct: 181 NNSCPVCRFKLPTEEEDDEECIRRRERFLGAMRLGEILAEEEDLFGFRRTLRRVARRHQL 240

Query: 171 VFPVSRRXXXXXXXXXXXXXXTMLMSPTQVAEAEMGALERENSVETVSSGWPSWPID-GE 347
               S                         A   +G + R NSVETVSS WPSWP++ G 
Sbjct: 241 DGGESTIGQ---------------------AGQGVGVVARANSVETVSS-WPSWPVENGS 278

Query: 348 GGDQEVGASGRGNDGTG 398
            GD+  G+  R   G G
Sbjct: 279 DGDEVGGSDNRLGGGQG 295


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