BLASTX nr result

ID: Bupleurum21_contig00013706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013706
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139665.1| PREDICTED: thioredoxin-like protein 4B-like ...   236   3e-60
ref|XP_002885671.1| hypothetical protein ARALYDRAFT_479992 [Arab...   229   4e-58
ref|XP_002265712.1| PREDICTED: thioredoxin-like protein 4B isofo...   229   6e-58
dbj|BAD43912.1| hypothetical protein [Arabidopsis thaliana]           228   1e-57
ref|NP_189117.2| mRNA splicing factor, thioredoxin-like U5 snRNP...   228   1e-57

>ref|XP_004139665.1| PREDICTED: thioredoxin-like protein 4B-like isoform 1 [Cucumis
           sativus] gi|449443802|ref|XP_004139666.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 2 [Cucumis
           sativus] gi|449475408|ref|XP_004154445.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 1 [Cucumis
           sativus] gi|449475410|ref|XP_004154446.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 2 [Cucumis
           sativus]
          Length = 151

 Score =  236 bits (603), Expect = 3e-60
 Identities = 114/151 (75%), Positives = 128/151 (84%)
 Frame = +1

Query: 88  MSYVLKTLKKKEQVDSVIRDTIDKVLVLRFGTXXXXXXXXXXXXXXXXERDVSKFASIAL 267
           MSY+L+TL KK +VDS+IRDTIDKVL+LRFG                  R+VSKFAS+AL
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 60

Query: 268 VDVDSEEIQVYVKYFDITFIPSTVFFFNAHHMKMDSGSADHTKWVGAFHRKQDFVDVVEE 447
           VD+DSEEIQVYVKYFDIT IPSTVFFFNAHHMKMDSG+ADHTKWVGAFH+KQDF+DVVE 
Sbjct: 61  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 120

Query: 448 IYRGAMKGKLIVNCPLPPERIPKFELLYKDV 540
           I+RGAMKGKLIVNCPLPPERIPK++L YKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 151


>ref|XP_002885671.1| hypothetical protein ARALYDRAFT_479992 [Arabidopsis lyrata subsp.
           lyrata] gi|297331511|gb|EFH61930.1| hypothetical protein
           ARALYDRAFT_479992 [Arabidopsis lyrata subsp. lyrata]
          Length = 151

 Score =  229 bits (585), Expect = 4e-58
 Identities = 108/151 (71%), Positives = 125/151 (82%)
 Frame = +1

Query: 88  MSYVLKTLKKKEQVDSVIRDTIDKVLVLRFGTXXXXXXXXXXXXXXXXERDVSKFASIAL 267
           MSY+LKTL KKE++D +IRDTID+VLVLRFG                  RDVSKFA +AL
Sbjct: 1   MSYLLKTLTKKEEIDRIIRDTIDEVLVLRFGRFSDDVCLQHDEILAKSVRDVSKFAKVAL 60

Query: 268 VDVDSEEIQVYVKYFDITFIPSTVFFFNAHHMKMDSGSADHTKWVGAFHRKQDFVDVVEE 447
           VDVDSEE+QVYVKYFDIT  PST+FFFNAHHMK+DSG+ADHTKW+GAFH KQDF++VVE 
Sbjct: 61  VDVDSEEVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWIGAFHIKQDFINVVEA 120

Query: 448 IYRGAMKGKLIVNCPLPPERIPKFELLYKDV 540
           IYRGAMKGK+IV CP+PPERIPK++LLYKDV
Sbjct: 121 IYRGAMKGKMIVQCPIPPERIPKYQLLYKDV 151


>ref|XP_002265712.1| PREDICTED: thioredoxin-like protein 4B isoform 1 [Vitis vinifera]
           gi|359480353|ref|XP_003632435.1| PREDICTED:
           thioredoxin-like protein 4B isoform 2 [Vitis vinifera]
           gi|297744299|emb|CBI37269.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  229 bits (583), Expect = 6e-58
 Identities = 109/151 (72%), Positives = 128/151 (84%)
 Frame = +1

Query: 88  MSYVLKTLKKKEQVDSVIRDTIDKVLVLRFGTXXXXXXXXXXXXXXXXERDVSKFASIAL 267
           MS+++ TL++K++VDS+IRDTIDKVLVLRFG                  R+VSKFA++AL
Sbjct: 1   MSFLMTTLREKKEVDSIIRDTIDKVLVLRFGRSTDSVCLHLDDILSKSAREVSKFATVAL 60

Query: 268 VDVDSEEIQVYVKYFDITFIPSTVFFFNAHHMKMDSGSADHTKWVGAFHRKQDFVDVVEE 447
           VD+DSE+IQVYVKYFDIT IPSTVFFFNAHHMKMDSGSADHTKWVGAF RKQDF+DVVE 
Sbjct: 61  VDIDSEDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGSADHTKWVGAFDRKQDFIDVVEA 120

Query: 448 IYRGAMKGKLIVNCPLPPERIPKFELLYKDV 540
           I+RGAMKGKLIV CPLPPERIPK++LLY+D+
Sbjct: 121 IFRGAMKGKLIVTCPLPPERIPKYQLLYRDL 151


>dbj|BAD43912.1| hypothetical protein [Arabidopsis thaliana]
          Length = 151

 Score =  228 bits (580), Expect = 1e-57
 Identities = 108/151 (71%), Positives = 124/151 (82%)
 Frame = +1

Query: 88  MSYVLKTLKKKEQVDSVIRDTIDKVLVLRFGTXXXXXXXXXXXXXXXXERDVSKFASIAL 267
           MSY+LKTL  KE++D VIRDTID+VLVLRFG                  RDVSKFA +AL
Sbjct: 1   MSYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVAL 60

Query: 268 VDVDSEEIQVYVKYFDITFIPSTVFFFNAHHMKMDSGSADHTKWVGAFHRKQDFVDVVEE 447
           VDVDSE++QVYVKYFDIT  PST+FFFNAHHMK+DSG+ADHTKWVGAFH KQDF+DVVE 
Sbjct: 61  VDVDSEDVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDVVEA 120

Query: 448 IYRGAMKGKLIVNCPLPPERIPKFELLYKDV 540
           IYRGAMKGK+IV CP+PPERIPK++L+YKDV
Sbjct: 121 IYRGAMKGKMIVQCPIPPERIPKYQLVYKDV 151


>ref|NP_189117.2| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis
           thaliana] gi|44917529|gb|AAS49089.1| At3g24730
           [Arabidopsis thaliana] gi|332643419|gb|AEE76940.1| mRNA
           splicing factor, thioredoxin-like U5 snRNP [Arabidopsis
           thaliana]
          Length = 159

 Score =  228 bits (580), Expect = 1e-57
 Identities = 108/151 (71%), Positives = 124/151 (82%)
 Frame = +1

Query: 88  MSYVLKTLKKKEQVDSVIRDTIDKVLVLRFGTXXXXXXXXXXXXXXXXERDVSKFASIAL 267
           MSY+LKTL  KE++D VIRDTID+VLVLRFG                  RDVSKFA +AL
Sbjct: 9   MSYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVAL 68

Query: 268 VDVDSEEIQVYVKYFDITFIPSTVFFFNAHHMKMDSGSADHTKWVGAFHRKQDFVDVVEE 447
           VDVDSE++QVYVKYFDIT  PST+FFFNAHHMK+DSG+ADHTKWVGAFH KQDF+DVVE 
Sbjct: 69  VDVDSEDVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDVVEA 128

Query: 448 IYRGAMKGKLIVNCPLPPERIPKFELLYKDV 540
           IYRGAMKGK+IV CP+PPERIPK++L+YKDV
Sbjct: 129 IYRGAMKGKMIVQCPIPPERIPKYQLVYKDV 159


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