BLASTX nr result

ID: Bupleurum21_contig00013692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013692
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...   105   6e-36
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...    96   7e-30
ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
gb|EEC84673.1| hypothetical protein OsI_31582 [Oryza sativa Indi...    60   6e-07

>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score =  105 bits (262), Expect(2) = 6e-36
 Identities = 55/102 (53%), Positives = 75/102 (73%)
 Frame = -2

Query: 606 MALSLQRYTGSSETHPLTQLLKQRIKKQKERLMLISLEKIDHLPENLIFEILSWLSVKDV 427
           MALSL RY  S     LT +LK+R +K++E  ++++      LPE+++ EILS L VK++
Sbjct: 1   MALSLSRYA-SPYRERLTSILKERDQKEREMSVVMATMTGHPLPEDVVIEILSRLPVKNL 59

Query: 426 LQFKSVCKSWYAIISSPNFVSKHLNNYYNNNDDWAGCLFVQH 301
           LQFK VCKSWYAII+SPNF+SKHL NYY+ +DD + CL VQ+
Sbjct: 60  LQFKCVCKSWYAIITSPNFISKHLRNYYSKSDD-SDCLLVQY 100



 Score = 72.0 bits (175), Expect(2) = 6e-36
 Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
 Frame = -1

Query: 187 VQHYISHA-ELKLYELLLDETPRVLAYDMLDDMPRHNCYVCGPCDGLYYLYHTDCWD-RA 14
           VQ+ ++ A EL+  ELLLDETP+VL+Y  L +MP H+ ++CGPCDG++Y+Y  D +D RA
Sbjct: 98  VQYCVTQAGELESLELLLDETPKVLSYASLGNMPFHSPFLCGPCDGIFYMYR-DYYDFRA 156

Query: 13  LWNP 2
            WNP
Sbjct: 157 FWNP 160


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 95.9 bits (237), Expect(2) = 7e-30
 Identities = 56/106 (52%), Positives = 73/106 (68%), Gaps = 4/106 (3%)
 Frame = -2

Query: 606 MALSLQRYTGSS--ETHPLTQLLKQRIKKQKERLMLISLEKI--DHLPENLIFEILSWLS 439
           MALSL+RY   S      L  +L++R   QKER M I++E +  D LPE++I EILS L 
Sbjct: 1   MALSLRRYAWPSYHNLDDLNCILRER--SQKEREMSIAMETMTGDPLPEDVIIEILSRLP 58

Query: 438 VKDVLQFKSVCKSWYAIISSPNFVSKHLNNYYNNNDDWAGCLFVQH 301
           VK++LQFK VCKSW+AII+SP  +SKHL NYY+ ND  + CL  Q+
Sbjct: 59  VKNLLQFKCVCKSWHAIITSPKLISKHLRNYYDKND--SDCLLAQY 102



 Score = 61.2 bits (147), Expect(2) = 7e-30
 Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -1

Query: 184 QHYISHA-ELKLYELLLDETP-RVLAYDMLDDMPRHNCYVCGPCDGLYYLYHTDCWDRAL 11
           Q+ ++ A E+  +ELL+DETP R L+Y +LD MP  + Y+ GPCDG++YLY       AL
Sbjct: 101 QYRVTQAGEIASFELLVDETPTRALSYGLLDRMPFQSPYIYGPCDGIFYLYGHFYDFHAL 160

Query: 10  WNP 2
           WNP
Sbjct: 161 WNP 163


>ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = -2

Query: 480 LPENLIFEILSWLSVKDVLQFKSVCKSWYAIISSPNFVSKHLNNYYNN 337
           LPE++I EILS L VK +LQFK VCKSWY II+S NF+S HLNN+YNN
Sbjct: 9   LPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNN 56


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = -2

Query: 480 LPENLIFEILSWLSVKDVLQFKSVCKSWYAIISSPNFVSKHLNNYYNN 337
           LPE++I EILS L VK +LQFK VCKSWY II+S NF+S HLNN+YNN
Sbjct: 9   LPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNN 56


>gb|EEC84673.1| hypothetical protein OsI_31582 [Oryza sativa Indica Group]
          Length = 459

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
 Frame = -2

Query: 603 ALSLQRYTGSSETHPLTQLLKQRIKKQKERLMLISLEKI-------------DHLPENLI 463
           A  + R   +S+ H + QL ++ +  Q+  L+     K+              ++P++++
Sbjct: 42  AAGIVRRDSTSDGHEVNQL-ERLLSWQRNNLVTTRPRKVMRIVINSWSRFMPPYIPDDVM 100

Query: 462 FEILSWLSVKDVLQFKSVCKSWYAIISSPNFVSKHL 355
           F ILSWL  K +++FKSVCK+W+A+ISSP F   HL
Sbjct: 101 FNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHL 136


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