BLASTX nr result

ID: Bupleurum21_contig00013676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013676
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]   139   4e-31
ref|XP_002298461.1| f-box family protein [Populus trichocarpa] g...   137   1e-30
emb|CBI24276.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vit...   135   3e-30
ref|XP_003529497.1| PREDICTED: F-box protein At2g32560-like [Gly...   135   5e-30

>emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]
          Length = 364

 Score =  139 bits (349), Expect = 4e-31
 Identities = 54/88 (61%), Positives = 75/88 (85%)
 Frame = -1

Query: 515 IAGWWYGVVGHLGPCNGCELHCQCHSSETVIIEFKQFTPGSQWSKTIISRKDHSEIGDEA 336
           IAGWWYG+VGHL  C+G E +C+CH+SETV++EF Q+TPGS+W +T I+RKDH E G+EA
Sbjct: 276 IAGWWYGIVGHLESCDGNESYCRCHNSETVVLEFNQYTPGSRWRRTSINRKDHREEGNEA 335

Query: 335 EGFYGGLKKIYNEDEISMWQQIWPTKVI 252
           +GFYGG++K+   DEIS+W+Q+WP +V+
Sbjct: 336 DGFYGGIRKLCRNDEISVWKQLWPAEVL 363


>ref|XP_002298461.1| f-box family protein [Populus trichocarpa]
           gi|222845719|gb|EEE83266.1| f-box family protein
           [Populus trichocarpa]
          Length = 368

 Score =  137 bits (344), Expect = 1e-30
 Identities = 52/86 (60%), Positives = 74/86 (86%)
 Frame = -1

Query: 509 GWWYGVVGHLGPCNGCELHCQCHSSETVIIEFKQFTPGSQWSKTIISRKDHSEIGDEAEG 330
           GWWYGVVGHL  C+G E +C+CH+S+TV++EF Q+TPGS+W  T ++RK+H E GDEA+G
Sbjct: 282 GWWYGVVGHLELCDGNENYCRCHNSDTVVLEFHQYTPGSRWRSTAVNRKEHREEGDEADG 341

Query: 329 FYGGLKKIYNEDEISMWQQIWPTKVI 252
           FYGG++K+YN +EIS W+++WPT+V+
Sbjct: 342 FYGGIRKLYNNEEISRWKRLWPTEVL 367


>emb|CBI24276.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  135 bits (341), Expect = 3e-30
 Identities = 52/86 (60%), Positives = 73/86 (84%)
 Frame = -1

Query: 509 GWWYGVVGHLGPCNGCELHCQCHSSETVIIEFKQFTPGSQWSKTIISRKDHSEIGDEAEG 330
           GWWYG+VGHL  C+G E +C+CH+SETV++EF Q+TPGS+W +T I+RKDH E G+EA+G
Sbjct: 289 GWWYGIVGHLESCDGNESYCRCHNSETVVLEFNQYTPGSRWRRTSINRKDHREEGNEADG 348

Query: 329 FYGGLKKIYNEDEISMWQQIWPTKVI 252
           FYGG++K+   DEIS+W+Q+WP +V+
Sbjct: 349 FYGGIRKLCRNDEISVWKQLWPAEVL 374


>ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera]
          Length = 396

 Score =  135 bits (341), Expect = 3e-30
 Identities = 52/86 (60%), Positives = 73/86 (84%)
 Frame = -1

Query: 509 GWWYGVVGHLGPCNGCELHCQCHSSETVIIEFKQFTPGSQWSKTIISRKDHSEIGDEAEG 330
           GWWYG+VGHL  C+G E +C+CH+SETV++EF Q+TPGS+W +T I+RKDH E G+EA+G
Sbjct: 310 GWWYGIVGHLESCDGNESYCRCHNSETVVLEFNQYTPGSRWRRTSINRKDHREEGNEADG 369

Query: 329 FYGGLKKIYNEDEISMWQQIWPTKVI 252
           FYGG++K+   DEIS+W+Q+WP +V+
Sbjct: 370 FYGGIRKLCRNDEISVWKQLWPAEVL 395


>ref|XP_003529497.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 399

 Score =  135 bits (339), Expect = 5e-30
 Identities = 54/86 (62%), Positives = 71/86 (82%)
 Frame = -1

Query: 509 GWWYGVVGHLGPCNGCELHCQCHSSETVIIEFKQFTPGSQWSKTIISRKDHSEIGDEAEG 330
           GWWYGVVGHL  CNG E +C+CHSS+TV++EF  +TPGSQW +T ISRKDH E G+EA+G
Sbjct: 313 GWWYGVVGHLESCNGSENYCRCHSSDTVVLEFNHYTPGSQWRQTTISRKDHREEGNEADG 372

Query: 329 FYGGLKKIYNEDEISMWQQIWPTKVI 252
           FYGG++KI +E EI+ W+ +WP +V+
Sbjct: 373 FYGGIRKIKSEAEITTWKHLWPLEVL 398


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