BLASTX nr result
ID: Bupleurum21_contig00013653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00013653
(1044 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002890770.1| ATP binding protein [Arabidopsis lyrata subs... 409 e-112
ref|NP_174157.4| nucleotidyl transferase domain-containing prote... 407 e-111
ref|XP_003588447.1| Tyrosyl-tRNA synthetase [Medicago truncatula... 401 e-109
ref|XP_003517240.1| PREDICTED: tyrosyl-tRNA synthetase-like [Gly... 370 e-100
emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum] 369 e-100
>ref|XP_002890770.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297336612|gb|EFH67029.1| ATP binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 780
Score = 409 bits (1050), Expect = e-112
Identities = 200/349 (57%), Positives = 266/349 (76%), Gaps = 2/349 (0%)
Frame = -3
Query: 1042 GDMNKIQVVGKYFVEIFKALGVNLEDEKLELLWASKETDAQSDVYWPLVLNIARGNTVAR 863
GD+ KI+VVG+Y+ EIF+A G+N E +E LW+S E +A+ D YWPLV++IA N++A+
Sbjct: 121 GDLKKIRVVGEYYKEIFQAAGMN--SENVEFLWSSDEINARGDEYWPLVMDIACRNSLAQ 178
Query: 862 VERCIRIMGLFEHDELNASHIVYTIMQCADILFLEADICQTSMDQKEVYVLTREYCDKIE 683
++RC+ IMGL E +EL+A+HI+Y MQCAD FLEADICQ MDQ+ V +L R+YCD ++
Sbjct: 179 IKRCMPIMGLSETEELSAAHILYVCMQCADTFFLEADICQLGMDQQTVNLLARDYCDAVK 238
Query: 682 RESKPLILSHHVVSALQQGQEK--KNDPLSFIYMDDEEADVNVKIKKAYCPPNVVDANPC 509
R +KP+ILSHH++ LQQGQ+K K+DP S I+M+DEEA+VNVKIKKAYCPP++V+ NPC
Sbjct: 239 RGNKPVILSHHMLLGLQQGQKKMSKSDPSSAIFMEDEEAEVNVKIKKAYCPPDIVEGNPC 298
Query: 508 MEYIRYIIFPWFNEFVVERGEKNGGNKSFVNFEELISDYESGKLHPGDLKPALTKAINKI 329
+EY++YII PWF+EF VER +K GGN++F +FE++ +DYESG+LHP DLK AL+KA+NKI
Sbjct: 299 LEYVKYIILPWFSEFTVERDDKYGGNRTFKSFEDIATDYESGELHPKDLKDALSKALNKI 358
Query: 328 LQPVRDHFKKDATARDLLKRVKSYKITKDPPTEKHSASSDMESLSINXXXXXXXXXXXXX 149
LQPVRDHFK ++ A++LLK+VK YKIT+ PT ++S+D E LS+N
Sbjct: 359 LQPVRDHFKTNSRAKNLLKQVKGYKITRVMPT---ASSTDKEDLSVN----TSSAASSSD 411
Query: 148 XXXXXSPEVRKKFDTITSIGEECIKPDELGNLLTMKPEPIAYDGFEPSG 2
S E K+ T+ SIGEECI+ DEL NLL KP PI YDGFEPSG
Sbjct: 412 TGLQVSEETEMKYKTVRSIGEECIQEDELKNLLAKKPAPICYDGFEPSG 460
Score = 315 bits (808), Expect = 9e-84
Identities = 152/266 (57%), Positives = 208/266 (78%), Gaps = 2/266 (0%)
Frame = -3
Query: 1042 GDMNKIQVVGKYFVEIFKALGVNLEDEKLELLWASKETDAQSDVYWPLVLNIARGNTVAR 863
GD+ +I+VVG+YF EI++A G+N ++K+ LWAS E + + + YWPLV++IAR N + R
Sbjct: 501 GDLERIRVVGEYFKEIWQAGGMN--NDKVAFLWASDEINDKGNKYWPLVMDIARRNNLRR 558
Query: 862 VERCIRIMGLFEHDELNASHIVYTIMQCADILFLEADICQTSMDQKEVYVLTREYCDKIE 683
+ RC +IMG E + L+A+ I+Y MQCADI LEADICQ MDQ++V +L REYC I+
Sbjct: 559 ILRCGQIMGRSETEVLSAAQILYPCMQCADIFLLEADICQLGMDQRKVNMLAREYCADIK 618
Query: 682 RESKPLILSHHVVSALQQGQEK--KNDPLSFIYMDDEEADVNVKIKKAYCPPNVVDANPC 509
R++KP+ILSHH++ LQQGQEK K+DP S I+M+DEEADVN KI KAYCPP V+ NPC
Sbjct: 619 RKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIFMEDEEADVNEKINKAYCPPKTVEGNPC 678
Query: 508 MEYIRYIIFPWFNEFVVERGEKNGGNKSFVNFEELISDYESGKLHPGDLKPALTKAINKI 329
+EY++YI+ P FNEF VE E NGGNK+F +FE++++DYESG++HP DLK AL KA+N
Sbjct: 679 LEYVKYIVLPRFNEFKVE-SENNGGNKTFKSFEDIVADYESGEMHPEDLKKALMKALNIT 737
Query: 328 LQPVRDHFKKDATARDLLKRVKSYKI 251
LQPVRDHFK + A++LL++VKS+++
Sbjct: 738 LQPVRDHFKTNERAKNLLEQVKSHQV 763
>ref|NP_174157.4| nucleotidyl transferase domain-containing protein [Arabidopsis
thaliana] gi|332192840|gb|AEE30961.1| nucleotidyl
transferase domain-containing protein [Arabidopsis
thaliana]
Length = 748
Score = 407 bits (1046), Expect = e-111
Identities = 200/349 (57%), Positives = 266/349 (76%), Gaps = 2/349 (0%)
Frame = -3
Query: 1042 GDMNKIQVVGKYFVEIFKALGVNLEDEKLELLWASKETDAQSDVYWPLVLNIARGNTVAR 863
GD+ KI+VVG+YF EIF+A G+N E +E LW+S E +A+ D YWPLV++IA N++A+
Sbjct: 106 GDLKKIRVVGEYFKEIFQAAGMN--SENVEFLWSSDEINAKGDEYWPLVMDIACRNSLAQ 163
Query: 862 VERCIRIMGLFEHDELNASHIVYTIMQCADILFLEADICQTSMDQKEVYVLTREYCDKIE 683
++RC+ IMGL E++EL+A+HI+Y MQCAD FLEADICQ MDQ+ V +L R+YCD ++
Sbjct: 164 IKRCMPIMGLSENEELSAAHILYVCMQCADTFFLEADICQLGMDQQTVNLLARDYCDVVK 223
Query: 682 RESKPLILSHHVVSALQQGQEK--KNDPLSFIYMDDEEADVNVKIKKAYCPPNVVDANPC 509
RE+KP+ILSHH++ LQQGQ+K K+DP S I+M+DEEA+VNVKIKKAYCPP++V+ NPC
Sbjct: 224 RENKPVILSHHMLPGLQQGQKKMSKSDPSSAIFMEDEEAEVNVKIKKAYCPPDIVEGNPC 283
Query: 508 MEYIRYIIFPWFNEFVVERGEKNGGNKSFVNFEELISDYESGKLHPGDLKPALTKAINKI 329
+EY+++II PWF+EF VER EK GGN++F +FE++ +DYESG+LHP DLK AL+KA+NKI
Sbjct: 284 LEYVKHIILPWFSEFTVERDEKYGGNRTFKSFEDITTDYESGQLHPKDLKDALSKALNKI 343
Query: 328 LQPVRDHFKKDATARDLLKRVKSYKITKDPPTEKHSASSDMESLSINXXXXXXXXXXXXX 149
LQPVRDHFK ++ A++LLK+VK YK+T+ PT ++S+ E LSIN
Sbjct: 344 LQPVRDHFKTNSRAKNLLKQVKGYKVTRVIPT---ASSTKEEDLSIN------TSASSSA 394
Query: 148 XXXXXSPEVRKKFDTITSIGEECIKPDELGNLLTMKPEPIAYDGFEPSG 2
S E K+ + SIGEECI+ DEL NLL KP PI YDGFEPSG
Sbjct: 395 AGLQMSEEAEMKYKIVRSIGEECIQEDELKNLLAKKPAPICYDGFEPSG 443
Score = 322 bits (824), Expect = 1e-85
Identities = 154/268 (57%), Positives = 211/268 (78%), Gaps = 2/268 (0%)
Frame = -3
Query: 1042 GDMNKIQVVGKYFVEIFKALGVNLEDEKLELLWASKETDAQSDVYWPLVLNIARGNTVAR 863
GD+ +I+VVG+YF EI++A G+N ++K+E LWAS E + + YWPLV++IAR N + R
Sbjct: 484 GDLERIRVVGEYFKEIWQAGGMN--NDKVEFLWASDEINGKGSKYWPLVMDIARRNNLRR 541
Query: 862 VERCIRIMGLFEHDELNASHIVYTIMQCADILFLEADICQTSMDQKEVYVLTREYCDKIE 683
+ RC +IMG E + L+A+ I+Y MQCADI LEADICQ MDQ++V +L REYC I+
Sbjct: 542 ILRCGQIMGRSETEVLSAAQILYPCMQCADIFLLEADICQLGMDQRKVNMLAREYCADIK 601
Query: 682 RESKPLILSHHVVSALQQGQEK--KNDPLSFIYMDDEEADVNVKIKKAYCPPNVVDANPC 509
R++KP+ILSHH++ LQQGQEK K+DP S I+M+DEEADVN KI KAYCPP V+ NPC
Sbjct: 602 RKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIFMEDEEADVNEKISKAYCPPKTVEGNPC 661
Query: 508 MEYIRYIIFPWFNEFVVERGEKNGGNKSFVNFEELISDYESGKLHPGDLKPALTKAINKI 329
+EY++YI+ P FNEF VE EKNGGNK+F +FE++++DYE+G+LHP DLK AL KA+N
Sbjct: 662 LEYVKYIVLPRFNEFKVE-SEKNGGNKTFNSFEDIVADYETGELHPEDLKKALMKALNIT 720
Query: 328 LQPVRDHFKKDATARDLLKRVKSYKITK 245
LQPVRDHFK + A++LL++VK++++T+
Sbjct: 721 LQPVRDHFKTNERAKNLLEQVKAFRVTR 748
>ref|XP_003588447.1| Tyrosyl-tRNA synthetase [Medicago truncatula]
gi|355477495|gb|AES58698.1| Tyrosyl-tRNA synthetase
[Medicago truncatula]
Length = 720
Score = 401 bits (1031), Expect = e-109
Identities = 191/350 (54%), Positives = 266/350 (76%), Gaps = 3/350 (0%)
Frame = -3
Query: 1042 GDMNKIQVVGKYFVEIFKALGVNLEDEKLELLWASKETDAQSDVYWPLVLNIARGNTVAR 863
GD+NKI+ VG+YF+EI+KA G++ E K+E LW+SKE + +D YWP VL+IA+ N++ R
Sbjct: 105 GDLNKIKTVGQYFIEIWKATGMDFEGGKVEFLWSSKEINGGADKYWPCVLDIAQNNSLKR 164
Query: 862 VERCIRIMGLFEHDELNASHIVYTIMQCADILFLEADICQTSMDQKEVYVLTREYCDKIE 683
+ RC +IMG E ++L AS I Y MQCADI FL+ADICQ MDQ++V VL REYCD I+
Sbjct: 165 IVRCSQIMGRSEQEDLTASQIFYPCMQCADIFFLQADICQLGMDQRKVNVLAREYCDVIK 224
Query: 682 RESKPLILSHHVVSALQQGQEK--KNDPLSFIYMDDEEADVNVKIKKAYCPPNVVDANPC 509
R +KP+ILSHH++ LQQGQEK K++PLS IYM+DEEA+VN+KI+KAYCPP +V ANPC
Sbjct: 225 RRNKPIILSHHMLPGLQQGQEKMSKSNPLSSIYMEDEEAEVNLKIEKAYCPPKIVQANPC 284
Query: 508 MEYIRYIIFPWFNEFVVERGEKNGGNKSFVNFEELISDYESGKLHPGDLKPALTKAINKI 329
+EYIRY+IFPWF EF +E G NGGNK+F +FE+L+ DYESG+++P DLKPAL+K++NKI
Sbjct: 285 LEYIRYLIFPWFKEFTMECGADNGGNKTFKSFEKLVVDYESGEVNPEDLKPALSKSLNKI 344
Query: 328 LQPVRDHFKKDATARDLLKRVKSYKITKDPPTEKHSASSD-MESLSINXXXXXXXXXXXX 152
L+ +R+HF+KD A++LLK VK+Y++T++P + +A ++ +E+LS++
Sbjct: 345 LESIREHFRKDKNAKELLKEVKAYRVTREPISIGEAADAEALETLSMD----------ES 394
Query: 151 XXXXXXSPEVRKKFDTITSIGEECIKPDELGNLLTMKPEPIAYDGFEPSG 2
S + ++F+T+ S+GEEC + DEL N+L KPEP+ YDGFE SG
Sbjct: 395 SNSNATSQQSLQRFETVKSVGEECTQEDELLNILANKPEPVCYDGFELSG 444
Score = 286 bits (731), Expect = 8e-75
Identities = 138/267 (51%), Positives = 194/267 (72%), Gaps = 2/267 (0%)
Frame = -3
Query: 1039 DMNKIQVVGKYFVEIFKALGVNLEDEKLELLWASKETDAQSDVYWPLVLNIARGNTVARV 860
D K + +G+Y +E++KA+G+++E K+E LW+SKE DA++D YWPLVL+IA+ +V R+
Sbjct: 474 DWFKTETIGRYMIEVWKAIGMDMEGGKVEFLWSSKEIDARADEYWPLVLDIAQKFSVQRI 533
Query: 859 ERCIRIMGLFEHDELNASHIVYTIMQCADILFLEADICQTSMDQKEVYVLTREYCDKIER 680
C IMG E+ + + Y+I + VL R+YCD I+R
Sbjct: 534 LSCSEIMGRSENMKNPLVLLKYSI--------------------HALNVLARDYCDIIKR 573
Query: 679 ESKPLILSHHVVSALQQGQEK--KNDPLSFIYMDDEEADVNVKIKKAYCPPNVVDANPCM 506
++KP+ILSH+++ QQGQEK K+DPLS I+M+DEEADVNVKIKKAYCPP + + NPC+
Sbjct: 574 KNKPVILSHNMLPGPQQGQEKMSKSDPLSCIFMEDEEADVNVKIKKAYCPPKITEGNPCL 633
Query: 505 EYIRYIIFPWFNEFVVERGEKNGGNKSFVNFEELISDYESGKLHPGDLKPALTKAINKIL 326
+YI+ ++ PWFNEF VER NGGNK+F +FEEL++DYE G+LHP DLKPAL+K++NKIL
Sbjct: 634 DYIKQLVLPWFNEFTVERSADNGGNKTFKSFEELVADYEIGELHPADLKPALSKSLNKIL 693
Query: 325 QPVRDHFKKDATARDLLKRVKSYKITK 245
+PVR HF+ + A++LLK+VK+YKITK
Sbjct: 694 EPVRLHFRTNKEAKELLKKVKAYKITK 720
>ref|XP_003517240.1| PREDICTED: tyrosyl-tRNA synthetase-like [Glycine max]
Length = 381
Score = 370 bits (949), Expect = e-100
Identities = 169/268 (63%), Positives = 221/268 (82%), Gaps = 2/268 (0%)
Frame = -3
Query: 1042 GDMNKIQVVGKYFVEIFKALGVNLEDEKLELLWASKETDAQSDVYWPLVLNIARGNTVAR 863
GD+ KI+ VG+Y +EI+KA+G++LE K+E LW+SKE +A++D YWPLVL+IA+ N + R
Sbjct: 114 GDLKKIETVGRYLIEIWKAVGMDLESGKVEFLWSSKEINARADEYWPLVLDIAQKNNLKR 173
Query: 862 VERCIRIMGLFEHDELNASHIVYTIMQCADILFLEADICQTSMDQKEVYVLTREYCDKIE 683
+ RC +IMG E DEL A+ I Y MQCADI FL+ADICQ MDQ++V VL REYCD I+
Sbjct: 174 IIRCSQIMGRSEQDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK 233
Query: 682 RESKPLILSHHVVSALQQGQEK--KNDPLSFIYMDDEEADVNVKIKKAYCPPNVVDANPC 509
R++KP+ILSHH++ LQQGQEK K+DP S I+M+DEEA+VNVKIKKAYCPP V+ NPC
Sbjct: 234 RKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDEEAEVNVKIKKAYCPPKTVEGNPC 293
Query: 508 MEYIRYIIFPWFNEFVVERGEKNGGNKSFVNFEELISDYESGKLHPGDLKPALTKAINKI 329
+EYI+Y++ PWFNEF VER NGGNK+F +F EL + YESG+LHPGDLKPAL K++NKI
Sbjct: 294 LEYIKYLVLPWFNEFTVERSADNGGNKTFTSFAELTAAYESGELHPGDLKPALAKSLNKI 353
Query: 328 LQPVRDHFKKDATARDLLKRVKSYKITK 245
L+PVR+HF+KD+ A++LLKRVK+Y++TK
Sbjct: 354 LEPVREHFRKDSNAKELLKRVKAYRVTK 381
Score = 63.2 bits (152), Expect = 1e-07
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -3
Query: 118 KKFDTITSIGEECIKPDELGNLLTMKPEPIAYDGFEPSG 2
+KF + S+GEECI+ DEL NLLT KPEP+ YDGFEPSG
Sbjct: 35 EKFQIVRSVGEECIQEDELLNLLTKKPEPVCYDGFEPSG 73
>emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
Length = 408
Score = 369 bits (947), Expect = e-100
Identities = 170/268 (63%), Positives = 219/268 (81%), Gaps = 2/268 (0%)
Frame = -3
Query: 1042 GDMNKIQVVGKYFVEIFKALGVNLEDEKLELLWASKETDAQSDVYWPLVLNIARGNTVAR 863
GD+ KI+VVG+Y +EI+KA+G+NLE +E LW+SKE ++++ YWPLV+++AR N + R
Sbjct: 141 GDLKKIEVVGQYLIEIWKAVGMNLEGGHVEFLWSSKEINSRAHEYWPLVMDVARRNKLPR 200
Query: 862 VERCIRIMGLFEHDELNASHIVYTIMQCADILFLEADICQTSMDQKEVYVLTREYCDKIE 683
+ RC +IMG E DEL A+ I Y MQCADI FL+ADICQ MDQ++V VL REYCD I
Sbjct: 201 ILRCCQIMGRSEQDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIR 260
Query: 682 RESKPLILSHHVVSALQQGQEK--KNDPLSFIYMDDEEADVNVKIKKAYCPPNVVDANPC 509
R++KP+ILSHH++ LQ+GQEK K+DP S IYM+DEEADVN+KIKKA+CPP VV+ NPC
Sbjct: 261 RKNKPIILSHHMLPGLQEGQEKMSKSDPSSSIYMEDEEADVNLKIKKAFCPPKVVEKNPC 320
Query: 508 MEYIRYIIFPWFNEFVVERGEKNGGNKSFVNFEELISDYESGKLHPGDLKPALTKAINKI 329
+EYI+YI+ PWFNEF +ER +NG +K++ NFEEL +DYESG LHP DLKPAL+KAINKI
Sbjct: 321 LEYIKYIVLPWFNEFKIERSAENGADKTYKNFEELAADYESGNLHPADLKPALSKAINKI 380
Query: 328 LQPVRDHFKKDATARDLLKRVKSYKITK 245
LQPVRDHFK D A+DL+KRVKS+K+T+
Sbjct: 381 LQPVRDHFKNDQKAKDLMKRVKSFKVTR 408
Score = 60.8 bits (146), Expect = 5e-07
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -3
Query: 124 VRKKFDTITSIGEECIKPDELGNLLTMKPEPIAYDGFEPSG 2
+ +KF + SIGEECI+ DEL NLL KP+P+ YDGFEPSG
Sbjct: 60 LEEKFKIVRSIGEECIQEDELMNLLAKKPQPVCYDGFEPSG 100