BLASTX nr result

ID: Bupleurum21_contig00013646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013646
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protei...   117   7e-25
ref|XP_002528138.1| conserved hypothetical protein [Ricinus comm...   110   1e-22
ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protei...   108   4e-22
ref|XP_004154171.1| PREDICTED: mitochondral 37S ribosomal protei...   108   4e-22
ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protei...   108   4e-22

>ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protein S27 [Vitis vinifera]
           gi|297738035|emb|CBI27236.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/57 (98%), Positives = 56/57 (98%)
 Frame = +1

Query: 1   IFGHVLNPTGQRSPHKILRKKLIGEKVASWYPYDIKKDDPLVMARQEQERLSKLEML 171
           IFGHVLNPTGQRSPHKILRKKLIGEKVA WYPYDIKKDDPLVMARQEQERLSKLEML
Sbjct: 25  IFGHVLNPTGQRSPHKILRKKLIGEKVAQWYPYDIKKDDPLVMARQEQERLSKLEML 81


>ref|XP_002528138.1| conserved hypothetical protein [Ricinus communis]
           gi|223532436|gb|EEF34229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 105

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   IFGHVLNPTGQRSPHKILRKKLIGEKVASWYPYDIKKDDPLVMARQEQERLSKLEML 171
           IFGH+LNPTG +SPHKILRKKLIGEKVA WYP+DIK+DDPLVMARQEQERLSKLEML
Sbjct: 26  IFGHILNPTGLKSPHKILRKKLIGEKVAQWYPHDIKRDDPLVMARQEQERLSKLEML 82


>ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protein S27-like [Cucumis
           sativus]
          Length = 141

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/57 (87%), Positives = 54/57 (94%)
 Frame = +1

Query: 1   IFGHVLNPTGQRSPHKILRKKLIGEKVASWYPYDIKKDDPLVMARQEQERLSKLEML 171
           IFGH+LNPTGQRS HK+LRKKLIG+KV+ WYPYDIKKDDPLVMAR EQERLSKLEML
Sbjct: 64  IFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPLVMARLEQERLSKLEML 120


>ref|XP_004154171.1| PREDICTED: mitochondral 37S ribosomal protein S27-like [Cucumis
           sativus]
          Length = 94

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/57 (87%), Positives = 54/57 (94%)
 Frame = +1

Query: 1   IFGHVLNPTGQRSPHKILRKKLIGEKVASWYPYDIKKDDPLVMARQEQERLSKLEML 171
           IFGH+LNPTGQRS HK+LRKKLIG+KV+ WYPYDIKKDDPLVMAR EQERLSKLEML
Sbjct: 17  IFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPLVMARLEQERLSKLEML 73


>ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protein S27-like isoform 1
           [Cucumis sativus] gi|449454786|ref|XP_004145135.1|
           PREDICTED: mitochondral 37S ribosomal protein S27-like
           isoform 2 [Cucumis sativus]
           gi|449454788|ref|XP_004145136.1| PREDICTED: mitochondral
           37S ribosomal protein S27-like isoform 3 [Cucumis
           sativus]
          Length = 102

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/57 (87%), Positives = 54/57 (94%)
 Frame = +1

Query: 1   IFGHVLNPTGQRSPHKILRKKLIGEKVASWYPYDIKKDDPLVMARQEQERLSKLEML 171
           IFGH+LNPTGQRS HK+LRKKLIG+KV+ WYPYDIKKDDPLVMAR EQERLSKLEML
Sbjct: 25  IFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPLVMARLEQERLSKLEML 81


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