BLASTX nr result

ID: Bupleurum21_contig00013625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013625
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV15379.1| AGO2A [Solanum lycopersicum]                            91   7e-17
gb|AFV08637.1| AGO2A2 [Solanum lycopersicum]                           91   7e-17
ref|XP_002520550.1| eukaryotic translation initiation factor 2c,...    88   6e-16
gb|AFV15380.1| AGO3 [Solanum lycopersicum]                             88   8e-16
ref|XP_003607856.1| Protein argonaute [Medicago truncatula] gi|3...    86   2e-15

>gb|AFV15379.1| AGO2A [Solanum lycopersicum]
          Length = 1057

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/58 (70%), Positives = 51/58 (87%)
 Frame = +3

Query: 3    YVLLDDHNFTSDQVQELIYHMCFTSAQCTKPISIVPPVHYADRVATRGRMYQEVLMEM 176
            +VL DD+ F SD +Q+LIY+MCFT A+CTKP+S+VPPV+YAD VA RGRM+QEVLMEM
Sbjct: 967  HVLWDDNGFNSDSLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRMFQEVLMEM 1024


>gb|AFV08637.1| AGO2A2 [Solanum lycopersicum]
          Length = 1042

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/58 (70%), Positives = 51/58 (87%)
 Frame = +3

Query: 3    YVLLDDHNFTSDQVQELIYHMCFTSAQCTKPISIVPPVHYADRVATRGRMYQEVLMEM 176
            +VL DD+ F SD +Q+LIY+MCFT A+CTKP+S+VPPV+YAD VA RGRM+QEVLMEM
Sbjct: 952  HVLWDDNGFNSDSLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRMFQEVLMEM 1009


>ref|XP_002520550.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540264|gb|EEF41836.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 492

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/91 (47%), Positives = 58/91 (63%)
 Frame = +3

Query: 3   YVLLDDHNFTSDQVQELIYHMCFTSAQCTKPISIVPPVHYADRVATRGRMYQEVLMEMQX 182
           +VL D+H F+SDQ+Q+LIY+MC+T A+CTKP+S+VPPV+YAD VA RGR+Y E +M+ Q 
Sbjct: 393 HVLWDEHGFSSDQLQKLIYNMCYTFARCTKPVSLVPPVYYADLVAYRGRLYYEAVMDGQ- 451

Query: 183 XXXXXXXXXXXXXXXXXXXXXXFDDAFYKLH 275
                                  DD FY+LH
Sbjct: 452 SPASATSSSSSAASSSLSSAASLDDRFYRLH 482


>gb|AFV15380.1| AGO3 [Solanum lycopersicum]
          Length = 999

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +3

Query: 3    YVLLDDHNFTSDQVQELIYHMCFTSAQCTKPISIVPPVHYADRVATRGRMYQEVLMEMQ 179
            +VL DD+ F S  +Q LIY+MCFT A+CTKP+S+VPPV+YAD VA RGRM+QEVLMEM+
Sbjct: 901  HVLYDDNGFISVDLQRLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRMFQEVLMEMK 959


>ref|XP_003607856.1| Protein argonaute [Medicago truncatula] gi|355508911|gb|AES90053.1|
            Protein argonaute [Medicago truncatula]
          Length = 977

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/94 (46%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3    YVLLDDHNFTSDQVQELIYHMCFTSAQCTKPISIVPPVHYADRVATRGRMYQEVLMEMQX 182
            +VL D+H FTSD +Q+LIY MCFT A+CTKP+S+VPPV+YAD  A RGR+Y E  M  Q 
Sbjct: 875  HVLWDEHRFTSDNLQKLIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRLYYEAKMSTQS 934

Query: 183  XXXXXXXXXXXXXXXXXXXXXXF--DDAFYKLHP 278
                                     D  FYKLHP
Sbjct: 935  PYSTVSSSSSPLASSSISSTASISNDPGFYKLHP 968


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