BLASTX nr result

ID: Bupleurum21_contig00013624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013624
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV15379.1| AGO2A [Solanum lycopersicum]                           241   8e-62
gb|AFV08637.1| AGO2A2 [Solanum lycopersicum]                          241   8e-62
ref|XP_002520550.1| eukaryotic translation initiation factor 2c,...   239   4e-61
ref|XP_002332150.1| argonaute protein group [Populus trichocarpa...   235   8e-60
gb|AFV15380.1| AGO3 [Solanum lycopersicum]                            234   2e-59

>gb|AFV15379.1| AGO2A [Solanum lycopersicum]
          Length = 1057

 Score =  241 bits (616), Expect = 8e-62
 Identities = 122/193 (63%), Positives = 141/193 (73%)
 Frame = -3

Query: 723  GVGESQFDMVLNEELNDLKAALYEEHYKPTITLVVAQKRHHTRLFLEDQGGDKRRNISPG 544
            GV E QFDMVLNEEL DL  A+Y+ +Y+P ITLVVAQKRHHTRLF E  GG    N+ PG
Sbjct: 879  GVSEGQFDMVLNEELLDLAKAIYDSNYQPAITLVVAQKRHHTRLFPE--GGPA--NVPPG 934

Query: 543  TVVDTVVVHPFEYDFYLCSHYGQLGTSKPTHYYVLSDDHNFTSDQLQKLIYQMCFTFARC 364
            TVVDT++VHP ++DFYLCSH+G LGTSKPTHY+VL DD+ F SD LQKLIY MCFTFARC
Sbjct: 935  TVVDTIIVHPSDFDFYLCSHFGGLGTSKPTHYHVLWDDNGFNSDSLQKLIYNMCFTFARC 994

Query: 363  TKPISIVPPVYYADLVATRGRMFQEVLMEMQXXXXXXXXXXXXXXXXXXXXXXXXXXTFY 184
            TKP+S+VPPVYYADLVA RGRMFQEVLMEM                            FY
Sbjct: 995  TKPVSLVPPVYYADLVAYRGRMFQEVLMEMN----------SPSSATSSSPTASFQQKFY 1044

Query: 183  KLHTELQDIMFFI 145
             LH++LQ++MFF+
Sbjct: 1045 DLHSDLQNVMFFV 1057


>gb|AFV08637.1| AGO2A2 [Solanum lycopersicum]
          Length = 1042

 Score =  241 bits (616), Expect = 8e-62
 Identities = 122/193 (63%), Positives = 141/193 (73%)
 Frame = -3

Query: 723  GVGESQFDMVLNEELNDLKAALYEEHYKPTITLVVAQKRHHTRLFLEDQGGDKRRNISPG 544
            GV E QFDMVLNEEL DL  A+Y+ +Y+P ITLVVAQKRHHTRLF E  GG    N+ PG
Sbjct: 864  GVSEGQFDMVLNEELLDLAKAIYDSNYQPAITLVVAQKRHHTRLFPE--GGPA--NVPPG 919

Query: 543  TVVDTVVVHPFEYDFYLCSHYGQLGTSKPTHYYVLSDDHNFTSDQLQKLIYQMCFTFARC 364
            TVVDT++VHP ++DFYLCSH+G LGTSKPTHY+VL DD+ F SD LQKLIY MCFTFARC
Sbjct: 920  TVVDTIIVHPSDFDFYLCSHFGGLGTSKPTHYHVLWDDNGFNSDSLQKLIYNMCFTFARC 979

Query: 363  TKPISIVPPVYYADLVATRGRMFQEVLMEMQXXXXXXXXXXXXXXXXXXXXXXXXXXTFY 184
            TKP+S+VPPVYYADLVA RGRMFQEVLMEM                            FY
Sbjct: 980  TKPVSLVPPVYYADLVAYRGRMFQEVLMEMN----------SPSSATSSSPTASFQQKFY 1029

Query: 183  KLHTELQDIMFFI 145
             LH++LQ++MFF+
Sbjct: 1030 DLHSDLQNVMFFV 1042


>ref|XP_002520550.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540264|gb|EEF41836.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 492

 Score =  239 bits (610), Expect = 4e-61
 Identities = 116/193 (60%), Positives = 137/193 (70%)
 Frame = -3

Query: 723 GVGESQFDMVLNEELNDLKAALYEEHYKPTITLVVAQKRHHTRLFLEDQGGDKRRNISPG 544
           GV E QFDMVLNEEL DLK A    +Y PT+TL+VAQKRH TRLF     G    N++PG
Sbjct: 301 GVSEGQFDMVLNEELIDLKRAFQSVNYTPTVTLIVAQKRHQTRLFPARSDGSSNGNVTPG 360

Query: 543 TVVDTVVVHPFEYDFYLCSHYGQLGTSKPTHYYVLSDDHNFTSDQLQKLIYQMCFTFARC 364
           TVVDT +VHPFE+DFYLCSHYG LGTSKPTHY+VL D+H F+SDQLQKLIY MC+TFARC
Sbjct: 361 TVVDTKIVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHGFSSDQLQKLIYNMCYTFARC 420

Query: 363 TKPISIVPPVYYADLVATRGRMFQEVLMEMQXXXXXXXXXXXXXXXXXXXXXXXXXXTFY 184
           TKP+S+VPPVYYADLVA RGR++ E +M+ Q                           FY
Sbjct: 421 TKPVSLVPPVYYADLVAYRGRLYYEAVMDGQ-SPASATSSSSSAASSSLSSAASLDDRFY 479

Query: 183 KLHTELQDIMFFI 145
           +LH EL++IMFF+
Sbjct: 480 RLHAELENIMFFV 492


>ref|XP_002332150.1| argonaute protein group [Populus trichocarpa]
            gi|222875200|gb|EEF12331.1| argonaute protein group
            [Populus trichocarpa]
          Length = 1020

 Score =  235 bits (599), Expect = 8e-60
 Identities = 118/193 (61%), Positives = 137/193 (70%)
 Frame = -3

Query: 723  GVGESQFDMVLNEELNDLKAALYEEHYKPTITLVVAQKRHHTRLFLEDQGGDKRRNISPG 544
            GV E QFDMVLN+EL D+K A     Y PTITL+VAQKRH TRLFLED  G +  N+SPG
Sbjct: 831  GVSEGQFDMVLNDELMDIKRAFRSIMYTPTITLIVAQKRHQTRLFLED--GGRIGNVSPG 888

Query: 543  TVVDTVVVHPFEYDFYLCSHYGQLGTSKPTHYYVLSDDHNFTSDQLQKLIYQMCFTFARC 364
            TVVDT +VHPFEYDFYLCSHYG LGTSKPTHY+VL D+H  +SDQLQKLIY MCFTFARC
Sbjct: 889  TVVDTKIVHPFEYDFYLCSHYGSLGTSKPTHYHVLWDEHGLSSDQLQKLIYDMCFTFARC 948

Query: 363  TKPISIVPPVYYADLVATRGRMFQEVLMEMQXXXXXXXXXXXXXXXXXXXXXXXXXXTFY 184
            TKP+S+VPPVYYADLVA RGR++ E +ME Q                           F 
Sbjct: 949  TKPVSLVPPVYYADLVAYRGRLYHEAVMEGQ-SPSSVSSSSSSRTSSSLSVGASLEERFC 1007

Query: 183  KLHTELQDIMFFI 145
             LH +L++IM+F+
Sbjct: 1008 MLHADLENIMYFV 1020


>gb|AFV15380.1| AGO3 [Solanum lycopersicum]
          Length = 999

 Score =  234 bits (596), Expect = 2e-59
 Identities = 122/194 (62%), Positives = 138/194 (71%), Gaps = 1/194 (0%)
 Frame = -3

Query: 723  GVGESQFDMVLNEELNDLKAALYEEH-YKPTITLVVAQKRHHTRLFLEDQGGDKRRNISP 547
            GV +SQFDMVLNEEL DL  A+YE + Y+P ITLVVAQKRHHTRLF       K  N+SP
Sbjct: 814  GVSDSQFDMVLNEELTDLANAIYESNKYQPAITLVVAQKRHHTRLF------PKEGNVSP 867

Query: 546  GTVVDTVVVHPFEYDFYLCSHYGQLGTSKPTHYYVLSDDHNFTSDQLQKLIYQMCFTFAR 367
            GTVVDT +VHP  +DFYLCSHYGQLGTSK THY+VL DD+ F S  LQ+LIY MCFTFAR
Sbjct: 868  GTVVDTQIVHPSGFDFYLCSHYGQLGTSKATHYHVLYDDNGFISVDLQRLIYNMCFTFAR 927

Query: 366  CTKPISIVPPVYYADLVATRGRMFQEVLMEMQXXXXXXXXXXXXXXXXXXXXXXXXXXTF 187
            CTKP+S+VPPVYYADLVA RGRMFQEVLMEM+                           F
Sbjct: 928  CTKPVSLVPPVYYADLVAYRGRMFQEVLMEMK--SPRSTTSSSEASSSSSSPIDSFAQEF 985

Query: 186  YKLHTELQDIMFFI 145
            Y LH +L+DIMFF+
Sbjct: 986  YDLHHDLKDIMFFV 999


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