BLASTX nr result

ID: Bupleurum21_contig00013623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013623
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25992.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kD...   167   1e-39
ref|XP_004147903.1| PREDICTED: signal recognition particle 19 kD...   164   1e-38
emb|CBI25945.3| unnamed protein product [Vitis vinifera]              164   1e-38
ref|XP_002519304.1| signal recognition particle 19 kD protein, p...   164   1e-38

>emb|CBI25992.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  167 bits (423), Expect = 1e-39
 Identities = 76/93 (81%), Positives = 85/93 (91%)
 Frame = -1

Query: 574 YINSKKTIAEGRRIGAAKACENPTCVEIADCCSHFKIPNAVELDKAYPRDFMQRGRVRFS 395
           YINSKKTIAEGRR+  +KACENPTCVEI DCCSH K+P A+E+DKAYPRDFMQRGRVR  
Sbjct: 95  YINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVL 154

Query: 394 LKRDDGTLYNPAISSKKQLMLHVAELVPRHPGR 296
           LK++DGTLYNPAISS+K+LM HVAELVPRHPGR
Sbjct: 155 LKKEDGTLYNPAISSRKELMRHVAELVPRHPGR 187


>ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kDa protein [Vitis
           vinifera]
          Length = 135

 Score =  167 bits (423), Expect = 1e-39
 Identities = 76/93 (81%), Positives = 85/93 (91%)
 Frame = -1

Query: 574 YINSKKTIAEGRRIGAAKACENPTCVEIADCCSHFKIPNAVELDKAYPRDFMQRGRVRFS 395
           YINSKKTIAEGRR+  +KACENPTCVEI DCCSH K+P A+E+DKAYPRDFMQRGRVR  
Sbjct: 18  YINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVL 77

Query: 394 LKRDDGTLYNPAISSKKQLMLHVAELVPRHPGR 296
           LK++DGTLYNPAISS+K+LM HVAELVPRHPGR
Sbjct: 78  LKKEDGTLYNPAISSRKELMRHVAELVPRHPGR 110


>ref|XP_004147903.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
           1 [Cucumis sativus] gi|449460341|ref|XP_004147904.1|
           PREDICTED: signal recognition particle 19 kDa
           protein-like isoform 2 [Cucumis sativus]
          Length = 135

 Score =  164 bits (415), Expect = 1e-38
 Identities = 75/93 (80%), Positives = 84/93 (90%)
 Frame = -1

Query: 574 YINSKKTIAEGRRIGAAKACENPTCVEIADCCSHFKIPNAVELDKAYPRDFMQRGRVRFS 395
           YINSKKTIAEGRRIG +KACENPTCVEI DCC H K+P A+E+DKAYPRDFMQRGRVR  
Sbjct: 18  YINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVL 77

Query: 394 LKRDDGTLYNPAISSKKQLMLHVAELVPRHPGR 296
           LK++DGTL NPAI+S+KQLML +AELVPRHPGR
Sbjct: 78  LKKEDGTLSNPAITSRKQLMLRIAELVPRHPGR 110


>emb|CBI25945.3| unnamed protein product [Vitis vinifera]
          Length = 169

 Score =  164 bits (414), Expect = 1e-38
 Identities = 75/93 (80%), Positives = 82/93 (88%)
 Frame = -1

Query: 574 YINSKKTIAEGRRIGAAKACENPTCVEIADCCSHFKIPNAVELDKAYPRDFMQRGRVRFS 395
           YINSKKTIAEGRR+  +KACENPTC EI DCCSH K+P A+E+DKAYPRDFMQRGRVR  
Sbjct: 52  YINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVL 111

Query: 394 LKRDDGTLYNPAISSKKQLMLHVAELVPRHPGR 296
           LK++DGTLYNPAISS K LM HVAELVPRHPGR
Sbjct: 112 LKKEDGTLYNPAISSHKDLMRHVAELVPRHPGR 144


>ref|XP_002519304.1| signal recognition particle 19 kD protein, putative [Ricinus
           communis] gi|223541619|gb|EEF43168.1| signal recognition
           particle 19 kD protein, putative [Ricinus communis]
          Length = 136

 Score =  164 bits (414), Expect = 1e-38
 Identities = 76/93 (81%), Positives = 83/93 (89%)
 Frame = -1

Query: 574 YINSKKTIAEGRRIGAAKACENPTCVEIADCCSHFKIPNAVELDKAYPRDFMQRGRVRFS 395
           YINSKKTIA+GRRI   KACENPTCVEI DCCSH K+P A+E+DKAYPRDFMQ GRVR  
Sbjct: 19  YINSKKTIAQGRRICTTKACENPTCVEIGDCCSHLKLPFAIEIDKAYPRDFMQIGRVRVL 78

Query: 394 LKRDDGTLYNPAISSKKQLMLHVAELVPRHPGR 296
           LKR+DGTLYNPAI ++KQLMLHVAELVPRHPGR
Sbjct: 79  LKREDGTLYNPAIPTRKQLMLHVAELVPRHPGR 111


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