BLASTX nr result

ID: Bupleurum21_contig00013622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013622
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74476.1| unknown [Paeonia suffruticosa]                         107   8e-22
ref|XP_002314858.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
ref|XP_002531622.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
ref|XP_002312400.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266...    86   2e-15

>gb|ABW74476.1| unknown [Paeonia suffruticosa]
          Length = 183

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/91 (60%), Positives = 72/91 (79%), Gaps = 3/91 (3%)
 Frame = -2

Query: 264 MTNCAIQ--NASTTWEEMRSSFTVSVSVSDKRDTVVCPKPRRLNLINTSIHEPISPLRWQ 91
           M +CAIQ  N     EEMRS   VS+ +SD+RD+VVCPKPRR+ L++++I +PI PLRW 
Sbjct: 1   MNHCAIQQQNVYAAREEMRSP--VSIPMSDRRDSVVCPKPRRMGLLDSTISDPIRPLRWH 58

Query: 90  MS-HQSEFCDSKAGNELLDIILSRGGYTVEQ 1
           +S HQSE+ DS+AG +LLDIILS+GGY+VEQ
Sbjct: 59  LSHHQSEYSDSRAGTDLLDIILSKGGYSVEQ 89


>ref|XP_002314858.1| predicted protein [Populus trichocarpa] gi|222863898|gb|EEF01029.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
 Frame = -2

Query: 264 MTNCAIQ-NASTTWEEMRSSFTVSVSVSDKRDTVVCPKPRRLNLINTSIHEPISPLRWQM 88
           M +CAIQ NA +T EE+RSS  VSV VSD+RD VVCPKPRRL L+N   + P   +R+Q+
Sbjct: 1   MNHCAIQQNAFSTREEIRSS--VSVPVSDRRDPVVCPKPRRLGLLN---NYPARSIRFQL 55

Query: 87  SHQSEFCDSKAGNELLDIILSRGGYTVE 4
           SHQSE CDSKAGNE LDIIL++GGY V+
Sbjct: 56  SHQSELCDSKAGNEFLDIILAKGGYGVD 83


>ref|XP_002531622.1| conserved hypothetical protein [Ricinus communis]
           gi|223528740|gb|EEF30750.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  100 bits (249), Expect = 1e-19
 Identities = 54/91 (59%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
 Frame = -2

Query: 264 MTNCAIQ-NASTTWEEMRSSFTVSVSVSDKRDTVVCPKPRRLNLINTSIHE-PISPLRWQ 91
           M  CAIQ +A +T EE+RSS  VS ++S++RD VVCPKPRR  L N S+++ P+  LRW 
Sbjct: 1   MKQCAIQTSAFSTREEIRSS--VSGTMSERRDPVVCPKPRRFGLFNASVNDHPVRSLRWH 58

Query: 90  MSHQSEFCDSKAGNELLDIILSRGG-YTVEQ 1
           +SHQ+E C+SKAGN+LLDIIL++GG Y VEQ
Sbjct: 59  LSHQTEICESKAGNDLLDIILTKGGCYGVEQ 89


>ref|XP_002312400.1| predicted protein [Populus trichocarpa] gi|222852220|gb|EEE89767.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/88 (54%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = -2

Query: 264 MTNCAIQ-NASTTWEEMRSSFTVSVSVSDKRDTVVCPKPRRLNLINTSIHEPISPLRWQM 88
           M +CAIQ NA +T EE+R+S  VS+ +S++RD VVCPKPRRL L+N     P   LR+Q+
Sbjct: 1   MNHCAIQQNAFSTREEIRNS--VSIPISERRDPVVCPKPRRLGLLND---HPARSLRFQL 55

Query: 87  SHQSEFCDSKAGNELLDIILSRGGYTVE 4
           SHQSE CDS AG + L+IIL++G Y ++
Sbjct: 56  SHQSELCDSIAGTDFLEIILAKGCYGMD 83


>ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera]
           gi|297737814|emb|CBI27015.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = -2

Query: 225 EEMRSSFTVSVSVSDKRDTVVCPKPRRLNLINTSIHEPISPLRWQMSHQSEFCDSKAGNE 46
           EEMR S    V  S++R  VVCPKPRRL L+N +I +P+ P+RW +S+Q+E  DSK+G +
Sbjct: 11  EEMRRS----VPASERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTELSDSKSGTD 66

Query: 45  LLDIILSRGGYTVE 4
           LLDIIL++GGY  E
Sbjct: 67  LLDIILAKGGYGAE 80


Top