BLASTX nr result

ID: Bupleurum21_contig00013620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013620
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517962.1| Peroxisomal membrane protein, putative [Rici...   406   e-111
emb|CBI20352.3| unnamed protein product [Vitis vinifera]              405   e-110
ref|XP_002284644.1| PREDICTED: uncharacterized protein LOC100253...   405   e-110
ref|XP_002874865.1| hypothetical protein ARALYDRAFT_490222 [Arab...   401   e-109
ref|NP_974505.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) famil...   400   e-109

>ref|XP_002517962.1| Peroxisomal membrane protein, putative [Ricinus communis]
            gi|223542944|gb|EEF44480.1| Peroxisomal membrane protein,
            putative [Ricinus communis]
          Length = 344

 Score =  406 bits (1044), Expect = e-111
 Identities = 182/230 (79%), Positives = 208/230 (90%)
 Frame = -2

Query: 1193 GSDPDPDKFMSRAVNASVVLIAGTFAITKLLTVDHDYWQGWTIYEILRYAPEHNWVAYEE 1014
            G + D +K M+RA+NAS+VL  GT A++KLLT+DHDYW GWT+YE+LRY PEHNW+AYE+
Sbjct: 93   GDNNDKEKLMTRAINASIVLGFGTLAVSKLLTIDHDYWHGWTLYEVLRYVPEHNWIAYEQ 152

Query: 1013 ALKTHPVLAKMVISGIVYSVGDWIAQCYEGKPLLEFDRARVFRSGLVGFSLHGSLSHYYY 834
            ALK++PVL KM ISGIVYS+GDWIAQCYEGKP+ EFDR R+FRSGLVGF+LHGSLSHYYY
Sbjct: 153  ALKSNPVLTKMAISGIVYSIGDWIAQCYEGKPIFEFDRTRMFRSGLVGFTLHGSLSHYYY 212

Query: 833  QFCEALFPSRDWWVVIGKVAFDQTVWAAIWNSIYYVVLGFLRFDSPGIIFSELKASFIPL 654
            QFCEALFP  DWWVV  KVAFDQTVWAAIWNSIY++VLGFLRF+SP  IFSEL A+F P+
Sbjct: 213  QFCEALFPFEDWWVVPAKVAFDQTVWAAIWNSIYFLVLGFLRFESPANIFSELTATFWPM 272

Query: 653  LTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTFSNDKSETR 504
            LTAGWKLWPF+HLITYGVIPVEQRLLWVDCVELIWVTILST+SN+KSE R
Sbjct: 273  LTAGWKLWPFSHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEAR 322


>emb|CBI20352.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  405 bits (1041), Expect = e-110
 Identities = 181/232 (78%), Positives = 210/232 (90%)
 Frame = -2

Query: 1193 GSDPDPDKFMSRAVNASVVLIAGTFAITKLLTVDHDYWQGWTIYEILRYAPEHNWVAYEE 1014
            G   D ++ + R++NA++VL AG+FA+TKLLT+D DYW GWTI+EILRYAP+HNW AYEE
Sbjct: 13   GEAEDVERLIDRSINATIVLAAGSFAVTKLLTIDADYWHGWTIFEILRYAPQHNWSAYEE 72

Query: 1013 ALKTHPVLAKMVISGIVYSVGDWIAQCYEGKPLLEFDRARVFRSGLVGFSLHGSLSHYYY 834
            ALKT+PV AKMVISG+VYS+GDWIAQCYEGKPL EFDRAR+ RSGLVGF+LHGSLSHYYY
Sbjct: 73   ALKTNPVFAKMVISGVVYSLGDWIAQCYEGKPLFEFDRARMLRSGLVGFTLHGSLSHYYY 132

Query: 833  QFCEALFPSRDWWVVIGKVAFDQTVWAAIWNSIYYVVLGFLRFDSPGIIFSELKASFIPL 654
            QFCEALFP +DWWVV  KVAFDQT+WAA+WNSIYY V+GFLRFDSP  +F EL+A+F P+
Sbjct: 133  QFCEALFPFQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANVFGELRATFWPM 192

Query: 653  LTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTFSNDKSETRIA 498
            LTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILST+SN+KSE R++
Sbjct: 193  LTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARVS 244


>ref|XP_002284644.1| PREDICTED: uncharacterized protein LOC100253839 [Vitis vinifera]
          Length = 371

 Score =  405 bits (1041), Expect = e-110
 Identities = 181/232 (78%), Positives = 210/232 (90%)
 Frame = -2

Query: 1193 GSDPDPDKFMSRAVNASVVLIAGTFAITKLLTVDHDYWQGWTIYEILRYAPEHNWVAYEE 1014
            G   D ++ + R++NA++VL AG+FA+TKLLT+D DYW GWTI+EILRYAP+HNW AYEE
Sbjct: 122  GEAEDVERLIDRSINATIVLAAGSFAVTKLLTIDADYWHGWTIFEILRYAPQHNWSAYEE 181

Query: 1013 ALKTHPVLAKMVISGIVYSVGDWIAQCYEGKPLLEFDRARVFRSGLVGFSLHGSLSHYYY 834
            ALKT+PV AKMVISG+VYS+GDWIAQCYEGKPL EFDRAR+ RSGLVGF+LHGSLSHYYY
Sbjct: 182  ALKTNPVFAKMVISGVVYSLGDWIAQCYEGKPLFEFDRARMLRSGLVGFTLHGSLSHYYY 241

Query: 833  QFCEALFPSRDWWVVIGKVAFDQTVWAAIWNSIYYVVLGFLRFDSPGIIFSELKASFIPL 654
            QFCEALFP +DWWVV  KVAFDQT+WAA+WNSIYY V+GFLRFDSP  +F EL+A+F P+
Sbjct: 242  QFCEALFPFQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANVFGELRATFWPM 301

Query: 653  LTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTFSNDKSETRIA 498
            LTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILST+SN+KSE R++
Sbjct: 302  LTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARVS 353


>ref|XP_002874865.1| hypothetical protein ARALYDRAFT_490222 [Arabidopsis lyrata subsp.
            lyrata] gi|297320702|gb|EFH51124.1| hypothetical protein
            ARALYDRAFT_490222 [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score =  401 bits (1031), Expect = e-109
 Identities = 179/226 (79%), Positives = 205/226 (90%)
 Frame = -2

Query: 1181 DPDKFMSRAVNASVVLIAGTFAITKLLTVDHDYWQGWTIYEILRYAPEHNWVAYEEALKT 1002
            D D+ MSR +NA++VL AGT A+TKLLT+DHDYWQGWT+YEILRYAPEHNWVAYE+ LKT
Sbjct: 73   DTDQLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWVAYEQILKT 132

Query: 1001 HPVLAKMVISGIVYSVGDWIAQCYEGKPLLEFDRARVFRSGLVGFSLHGSLSHYYYQFCE 822
            +PVLAKM ISGIVYS+GDWIAQCYEGKPL EFDRARV RSGLVGF+LHGSLSHYYYQFCE
Sbjct: 133  NPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRARVLRSGLVGFTLHGSLSHYYYQFCE 192

Query: 821  ALFPSRDWWVVIGKVAFDQTVWAAIWNSIYYVVLGFLRFDSPGIIFSELKASFIPLLTAG 642
            ALFP ++WWVV  KVAFDQT+W+AIWNSIY+ VLG LRF SP  IFSE+K +F P+LTAG
Sbjct: 193  ALFPFQEWWVVPAKVAFDQTIWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFWPMLTAG 252

Query: 641  WKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTFSNDKSETR 504
            WKLWP AHL+TYGVIPV+QRLLWVDC+ELIWVTILST+SN+K+E +
Sbjct: 253  WKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQ 298


>ref|NP_974505.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis
            thaliana] gi|332656916|gb|AEE82316.1| Peroxisomal
            membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis
            thaliana]
          Length = 361

 Score =  400 bits (1029), Expect = e-109
 Identities = 178/226 (78%), Positives = 204/226 (90%)
 Frame = -2

Query: 1181 DPDKFMSRAVNASVVLIAGTFAITKLLTVDHDYWQGWTIYEILRYAPEHNWVAYEEALKT 1002
            D D+ MSR +NA++VL AGT A+TKLLT+DHDYWQGWT+YEILRYAPEHNW AYE+ LKT
Sbjct: 78   DTDRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAYEQILKT 137

Query: 1001 HPVLAKMVISGIVYSVGDWIAQCYEGKPLLEFDRARVFRSGLVGFSLHGSLSHYYYQFCE 822
            +PVLAKM ISGIVYS+GDWIAQCYEGKPL EFDR RV RSGLVGF+LHGSLSHYYYQFCE
Sbjct: 138  NPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQFCE 197

Query: 821  ALFPSRDWWVVIGKVAFDQTVWAAIWNSIYYVVLGFLRFDSPGIIFSELKASFIPLLTAG 642
            ALFP ++WWVV  KVAFDQTVW+AIWNSIY+ VLG LRF SP  IFSE+K +F+P+LTAG
Sbjct: 198  ALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTAG 257

Query: 641  WKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTFSNDKSETR 504
            WKLWP AHL+TYGVIPV+QRLLWVDC+ELIWVTILST+SN+K+E +
Sbjct: 258  WKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQ 303


Top