BLASTX nr result

ID: Bupleurum21_contig00013608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013608
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16805.3| unnamed protein product [Vitis vinifera]              188   1e-45
ref|XP_004135491.1| PREDICTED: uncharacterized protein LOC101214...   186   7e-45
ref|XP_002315658.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
ref|XP_002892725.1| hypothetical protein ARALYDRAFT_471456 [Arab...   171   3e-40
ref|XP_002312668.1| predicted protein [Populus trichocarpa] gi|2...   169   7e-40

>emb|CBI16805.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  188 bits (478), Expect = 1e-45
 Identities = 115/307 (37%), Positives = 170/307 (55%), Gaps = 32/307 (10%)
 Frame = -3

Query: 936  ILARPGHIRFDPLDEDEAVQKSQESMGTFQGNEITTGMKEQRWGTEKISSTQRKDNVNIN 757
            I+ RPGHIRF+PL +D+ +Q++  S+ TFQ N  T+  K Q+WG EK+S  +R D  + N
Sbjct: 342  IVIRPGHIRFEPLGKDQTIQQNPVSVETFQWNGTTSKKKGQKWGKEKMSC-RRNDYKDFN 400

Query: 756  KDHSDTSNIEKDIRISAPIESDKLPPLPGNLPKEGYIIAYRLLQLSSAWTTDPSESRVGR 577
            + HS+T  +E+      P++ DKLP L  + PKEG +IAYRL++LSS WT + S  RVG+
Sbjct: 401  QQHSETFAVEEGTPPKDPMDFDKLPSLTSS-PKEGDMIAYRLIELSSTWTPELSTFRVGK 459

Query: 576  VLWYRPVSRRIMLAPVPEYPLILE-KFDGDKFASQ--PDTSRYNDDGSLEIDFRALLDVR 406
            +  Y P S +++L  VPE P++ E + D D  A +  PDTS Y +DGSLEIDF +L+DVR
Sbjct: 460  ISSYDPESNKLILISVPESPIVAETRIDEDASALEPDPDTSLYREDGSLEIDFSSLIDVR 519

Query: 405  LVAHTDANSGNDATVEVGEGILAKDVASNLVKDGDKQ----------------------E 292
            ++   +++     T  V   +  +D  S  VK  +K                       E
Sbjct: 520  IIKSGNSHLEKAVTARVEAPVDTQDAVSG-VKPNNKNSGMSTSLPGGELNITQVSVAGVE 578

Query: 291  HTPNK-------GNGEPNMWDHFTKALDTENSELSENKWGSWSERASKKSWPSYRAWKGS 133
            H  N+        NG+ N WD   K L  + ++LS+    S  E   +  W SY+A +GS
Sbjct: 579  HNINREMTAPPPENGKVNAWDEIDKVLSAKKAQLSQEDGSSKKESPGRSPW-SYKALRGS 637

Query: 132  SAGPAMA 112
            + GP M+
Sbjct: 638  ALGPTMS 644


>ref|XP_004135491.1| PREDICTED: uncharacterized protein LOC101214537 [Cucumis sativus]
          Length = 612

 Score =  186 bits (472), Expect = 7e-45
 Identities = 109/290 (37%), Positives = 166/290 (57%), Gaps = 10/290 (3%)
 Frame = -3

Query: 951  EDNNTILARPGHIRFDPLDEDEAVQKSQESMG-----TFQGNEITTGMKEQRWGTEKISS 787
            +D   ++ +PGHIRF+P+ +    Q  QE        T   N IT   K Q+WG EK  S
Sbjct: 320  DDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFLKETLHWNGITNKKKGQKWGKEKTPS 379

Query: 786  TQRKDNVNINKDH----SDTSNIEKDIRISAPIESDKLPPLPGNLPKEGYIIAYRLLQLS 619
             +R ++ + + +     S+T   +  + +   I  D+L P  G LP+EG +IAYRL++LS
Sbjct: 380  WKRNNSNDCSSEPLQLLSETEQPKTPVPVVGSINFDELRPYTG-LPQEGDLIAYRLIELS 438

Query: 618  SAWTTDPSESRVGRVLWYRPVSRRIMLAPVPEYPLILEKFDGDKFASQPDTSRYNDDGSL 439
            S WT + S  R G+V WY   S RIML PVPEYPL ++K   +    QPDT+ Y +DGSL
Sbjct: 439  STWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSL 498

Query: 438  EIDFRALLDVRLVAHTDANSGNDATVEVGEGILAKDVA-SNLVKDGDKQEHTPNKGNGEP 262
            +IDF +L+D+R++   + +S   A   V + I +K +A S+     +   +   +GNG+ 
Sbjct: 499  KIDFASLVDLRIIRQGNLDSSRTA---VNQEITSKQIAESSKHVHNNVDANNTRQGNGKV 555

Query: 261  NMWDHFTKALDTENSELSENKWGSWSERASKKSWPSYRAWKGSSAGPAMA 112
            + WD  ++AL  +  ELS+N   +  + + +KSW SYRA +GS+ GP MA
Sbjct: 556  SAWDEISEALSAKKVELSKNNGWNQEDSSGRKSW-SYRALRGSALGPTMA 604


>ref|XP_002315658.1| predicted protein [Populus trichocarpa] gi|222864698|gb|EEF01829.1|
            predicted protein [Populus trichocarpa]
          Length = 746

 Score =  177 bits (450), Expect = 3e-42
 Identities = 110/287 (38%), Positives = 159/287 (55%), Gaps = 12/287 (4%)
 Frame = -3

Query: 936  ILARPGHIRFDPL-------DEDEAVQKSQESMGTFQGNEITTGMKEQRWGTEKISSTQR 778
            ++ RPGHIRF+PL       D D AV ++  S+  FQ N IT+  K Q+WG EK+ S +R
Sbjct: 454  VVIRPGHIRFEPLKKGLMLGDSDHAVPQNHVSIERFQWNGITSKKKGQKWGKEKVVSCKR 513

Query: 777  KDNVNINKDHSDTSNIEKDIRISAPIESDKLPPLPGNLPKEGYIIAYRLLQLSSAWTTDP 598
             D  N  K+   +  IE+   +      ++ P L  +LPKEG +IAYRL++LSS+WT + 
Sbjct: 514  NDYNNFKKESYSSLTIEEQTPVYDCTNFEEFP-LYASLPKEGDVIAYRLVELSSSWTPEL 572

Query: 597  SESRVGRVLWYRPVSRRIMLAPVPEYPLILEKFDGDKFASQPDTSRYNDDGSLE----ID 430
            S  RVG+V  Y   S  +MLA VPEYP+I EK D +   + P+TS Y DDGSLE    I 
Sbjct: 573  SSYRVGKVSKYDLESNIVMLAQVPEYPVIPEKIDDEASDALPETSPYQDDGSLEVGVSIK 632

Query: 429  FRALLDVRLVAHTDANSGNDATVEVGE-GILAKDVASNLVKDGDKQEHTPNKGNGEPNMW 253
            F AL +VRLV H +  S    T    E  +  +D  +    + + +  T  + NG+ N W
Sbjct: 633  FSALFEVRLVHHGNIKSAKSVTGGSNEVHVRDQDSGTGFKLNNNHEAGTSAQENGKHNPW 692

Query: 252  DHFTKALDTENSELSENKWGSWSERASKKSWPSYRAWKGSSAGPAMA 112
            +   +AL  + + LS+       E + +  W SY+A +GS+ GP +A
Sbjct: 693  EETNQALTAQKAWLSQEDSCKKPESSGRSPW-SYKALRGSALGPTVA 738


>ref|XP_002892725.1| hypothetical protein ARALYDRAFT_471456 [Arabidopsis lyrata subsp.
            lyrata] gi|297338567|gb|EFH68984.1| hypothetical protein
            ARALYDRAFT_471456 [Arabidopsis lyrata subsp. lyrata]
          Length = 605

 Score =  171 bits (432), Expect = 3e-40
 Identities = 105/275 (38%), Positives = 158/275 (57%), Gaps = 4/275 (1%)
 Frame = -3

Query: 927  RPGHIRFDPLD-EDEAVQKSQESMGTFQGNEITTGMKEQRWGTEKISSTQRKDNVNINKD 751
            RPGHIRF PL   DEA  +S+  +  F  N   T  K Q+WGTEK   ++R    + N+D
Sbjct: 328  RPGHIRFKPLTGTDEAPLESEPLVEKFLWNGNMTKKKGQKWGTEKSGFSKRYAQ-DFNED 386

Query: 750  HS-DTSNIEKDIRISAPIESDKLPPLPGNLPKEGYIIAYRLLQLSSAWTTDPSESRVGRV 574
             +  T   E +     PI+ ++L    G++ K+G +IAYRL++L+S+WT + S  RVG++
Sbjct: 387  TTYQTQPTEAETPAKGPIDYEQLVAYTGSV-KKGDVIAYRLIELTSSWTPEVSSFRVGKI 445

Query: 573  LWYRPVSRRIMLAPVPEYPLILEKFDGDKFASQPDTSRYNDDGSLEIDFRALLDVRLVAH 394
             +Y P S+++ L PV E+P+  +  + D F+ +PDT+ Y +DGSLEI+F ALLDVR V  
Sbjct: 446  SYYDPDSKKVTLMPVQEFPIEKKTEEDDDFSMEPDTALYKEDGSLEIEFSALLDVRSVKT 505

Query: 393  TDANSGNDATVEVGEGILAKDVASNLVKDGDKQEHTPNKGNGEPNMWDHFTKALDTENSE 214
            + ++S   A     E       A+ L    +K   TP K NG+ N W+  ++AL  + +E
Sbjct: 506  SSSDSAEVAKSAPPE---PDQSATKLKLSANKDLQTPIKENGKVNPWEELSEALSAKKAE 562

Query: 213  LSE--NKWGSWSERASKKSWPSYRAWKGSSAGPAM 115
            LS+  N W      +   SW SY+A +GS+ GP M
Sbjct: 563  LSQANNGWNKKGSSSGGGSW-SYKALRGSAMGPVM 596


>ref|XP_002312668.1| predicted protein [Populus trichocarpa] gi|222852488|gb|EEE90035.1|
            predicted protein [Populus trichocarpa]
          Length = 479

 Score =  169 bits (429), Expect = 7e-40
 Identities = 102/279 (36%), Positives = 156/279 (55%), Gaps = 4/279 (1%)
 Frame = -3

Query: 936  ILARPGHIRFDPLD---EDEAVQKSQESMGTFQGNEITTGMKEQRWGTEKISSTQRKDNV 766
            I+ RPGHIRF+PL    +D+AV ++     +F  N IT+  K Q+WG EK  S +R D  
Sbjct: 195  IVIRPGHIRFEPLKKGGDDQAVLQNHIPTESFHWNGITSKKKGQKWGKEKAVSCKRNDYN 254

Query: 765  NINKDHSDTSNIEKDIRISAPIESDKLPPLPGNLPKEGYIIAYRLLQLSSAWTTDPSESR 586
            N  K+ S + +IE+   +      ++LP L  +LPKEG +IAYR+++LS +WT + S  R
Sbjct: 255  NFRKESSSSLSIEEQTPVYDCTNFEELP-LYASLPKEGDVIAYRVVELSLSWTPELSSYR 313

Query: 585  VGRVLWYRPVSRRIMLAPVPEYPLILEKFDGDKFASQPDTSRYNDDGSLEIDFRALLDVR 406
            VG++  Y   S  ++L  VP YP++ EK D +  A+ P+TS Y +DGSLEI F  L +VR
Sbjct: 314  VGKISKYDLESNIVILVQVPGYPVVPEKIDDEASAALPETSPYGEDGSLEIKFSTLHEVR 373

Query: 405  LVAHTDANSGNDATVEVGE-GILAKDVASNLVKDGDKQEHTPNKGNGEPNMWDHFTKALD 229
            LV H +  S         E  +  +D  +    + + + +T  + N + N W+   +AL 
Sbjct: 374  LVRHGNLESAKSIVSGSNEVHVRDQDSGTGFSPNNNHEANTSAQENEKRNPWEEINQALT 433

Query: 228  TENSELSENKWGSWSERASKKSWPSYRAWKGSSAGPAMA 112
             +   LS+      +E +S+  W SY+A +GSS G  MA
Sbjct: 434  AKKELLSQEDGWKKTESSSRSPW-SYKALRGSSLGRTMA 471


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