BLASTX nr result

ID: Bupleurum21_contig00013596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013596
         (1753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15364.3| unnamed protein product [Vitis vinifera]              275   2e-71
ref|XP_002273441.1| PREDICTED: uncharacterized protein LOC100268...   275   2e-71
ref|XP_002514591.1| zinc finger protein, putative [Ricinus commu...   259   2e-66
ref|XP_003550710.1| PREDICTED: uncharacterized protein LOC100814...   199   2e-48
ref|XP_002871309.1| zinc finger family protein [Arabidopsis lyra...   196   1e-47

>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score =  275 bits (704), Expect = 2e-71
 Identities = 182/439 (41%), Positives = 232/439 (52%), Gaps = 15/439 (3%)
 Frame = -1

Query: 1504 IDTVVALETTPIWS-QSVDGFDFYRSDSDFATTELRTSTVSNQRNQTSGSRILIGDVSDL 1328
            IDT   L++ P W     D F+ + SD       + T  +   R + S     + D+S+ 
Sbjct: 944  IDT---LDSLPYWGLHDFDSFNVFVSDHP--PIAVHTRDLFQTRPERSLHVRAVDDISEP 998

Query: 1327 DPSARNVDLIDRETQANFVMDMFDQRVEQSHPGLNLDLT--------LGGMEGN--TFEV 1178
            D S  NVDL+DRE Q NFV+++F QRVEQSH     DL          G +EGN  T   
Sbjct: 999  D-SITNVDLLDRENQVNFVLNLFHQRVEQSHVMGETDLVSETLDDSGFGVIEGNDETGST 1057

Query: 1177 DVGLDFGLGFSVGS---GXXXXXXXXXXXXXXDYSGFVCADCGDEFYXXXXXXXXXXXXX 1007
             + LD GLGF   +   G                SG        E +             
Sbjct: 1058 YLDLDLGLGFGAETNCLGVENCDFFVSRRVSGSESGESSTVSAAEPFGSSVGYVG----- 1112

Query: 1006 XSLELFENDFFMGGLRVSEMRNGVVDDFAFGIXXXXXXXXXXXXXXXXGLQICLDTFQLE 827
                 FE+D    G  +  +     DDF                     +++C D+ QL+
Sbjct: 1113 -----FESDSDEDGNALEGIDLQAEDDFRLD----------QAHDDDTSIRLCWDSLQLD 1157

Query: 826  DRVDGNNNEDFEWEEVDGAVDEREVLSMFFEAEVDDDASVVPLRDSGEVADGERNLRAVN 647
            D  +   NEDFEWEEVD  +DEREVL+M    + +    ++P+ +  EV  G R    V+
Sbjct: 1158 DHRE--TNEDFEWEEVDDVIDEREVLNMVLGPDEEGPIPLLPVGEPVEVDVG-REENMVS 1214

Query: 646  LEWEVLLDVHNFEVNHGFGHEEEDGGYVDHDEYT-TAENDMLFAQFGENENSFLGRPPAS 470
            L+WEVLL V N +      H+ E     DH +Y  T+E DMLF QF ENEN+  GRPPAS
Sbjct: 1215 LDWEVLLAVGNLDRTLEIEHDSEPY-LADHYDYIYTSEYDMLFGQFAENENALTGRPPAS 1273

Query: 469  KAFVENLNSVLLTEEDVENDNVLCAVCKDEMNVGESAKQLPCSHRYHGDCIVPWLGIRNT 290
            K+ V+NL  V+LT+ DVEN+N LCAVCKDE+NVGE AKQLPCSHRYHGDCI+PWLGIRNT
Sbjct: 1274 KSVVKNLPVVVLTQGDVENNNALCAVCKDEINVGELAKQLPCSHRYHGDCIMPWLGIRNT 1333

Query: 289  CPVCRYELPTDDPDYEHRK 233
            CPVCRYELPTDDP YE R+
Sbjct: 1334 CPVCRYELPTDDPQYEQRR 1352


>ref|XP_002273441.1| PREDICTED: uncharacterized protein LOC100268065 [Vitis vinifera]
          Length = 439

 Score =  275 bits (704), Expect = 2e-71
 Identities = 182/439 (41%), Positives = 232/439 (52%), Gaps = 15/439 (3%)
 Frame = -1

Query: 1504 IDTVVALETTPIWS-QSVDGFDFYRSDSDFATTELRTSTVSNQRNQTSGSRILIGDVSDL 1328
            IDT   L++ P W     D F+ + SD       + T  +   R + S     + D+S+ 
Sbjct: 24   IDT---LDSLPYWGLHDFDSFNVFVSDHP--PIAVHTRDLFQTRPERSLHVRAVDDISEP 78

Query: 1327 DPSARNVDLIDRETQANFVMDMFDQRVEQSHPGLNLDLT--------LGGMEGN--TFEV 1178
            D S  NVDL+DRE Q NFV+++F QRVEQSH     DL          G +EGN  T   
Sbjct: 79   D-SITNVDLLDRENQVNFVLNLFHQRVEQSHVMGETDLVSETLDDSGFGVIEGNDETGST 137

Query: 1177 DVGLDFGLGFSVGS---GXXXXXXXXXXXXXXDYSGFVCADCGDEFYXXXXXXXXXXXXX 1007
             + LD GLGF   +   G                SG        E +             
Sbjct: 138  YLDLDLGLGFGAETNCLGVENCDFFVSRRVSGSESGESSTVSAAEPFGSSVGYVG----- 192

Query: 1006 XSLELFENDFFMGGLRVSEMRNGVVDDFAFGIXXXXXXXXXXXXXXXXGLQICLDTFQLE 827
                 FE+D    G  +  +     DDF                     +++C D+ QL+
Sbjct: 193  -----FESDSDEDGNALEGIDLQAEDDFRLD----------QAHDDDTSIRLCWDSLQLD 237

Query: 826  DRVDGNNNEDFEWEEVDGAVDEREVLSMFFEAEVDDDASVVPLRDSGEVADGERNLRAVN 647
            D  +   NEDFEWEEVD  +DEREVL+M    + +    ++P+ +  EV  G R    V+
Sbjct: 238  DHRE--TNEDFEWEEVDDVIDEREVLNMVLGPDEEGPIPLLPVGEPVEVDVG-REENMVS 294

Query: 646  LEWEVLLDVHNFEVNHGFGHEEEDGGYVDHDEYT-TAENDMLFAQFGENENSFLGRPPAS 470
            L+WEVLL V N +      H+ E     DH +Y  T+E DMLF QF ENEN+  GRPPAS
Sbjct: 295  LDWEVLLAVGNLDRTLEIEHDSEPY-LADHYDYIYTSEYDMLFGQFAENENALTGRPPAS 353

Query: 469  KAFVENLNSVLLTEEDVENDNVLCAVCKDEMNVGESAKQLPCSHRYHGDCIVPWLGIRNT 290
            K+ V+NL  V+LT+ DVEN+N LCAVCKDE+NVGE AKQLPCSHRYHGDCI+PWLGIRNT
Sbjct: 354  KSVVKNLPVVVLTQGDVENNNALCAVCKDEINVGELAKQLPCSHRYHGDCIMPWLGIRNT 413

Query: 289  CPVCRYELPTDDPDYEHRK 233
            CPVCRYELPTDDP YE R+
Sbjct: 414  CPVCRYELPTDDPQYEQRR 432


>ref|XP_002514591.1| zinc finger protein, putative [Ricinus communis]
           gi|223546195|gb|EEF47697.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 479

 Score =  259 bits (662), Expect = 2e-66
 Identities = 134/225 (59%), Positives = 166/225 (73%), Gaps = 8/225 (3%)
 Frame = -1

Query: 859 LQICLDTFQLEDRVDGNNNEDFEWEEVDGAVDEREVLSMFFEAEVDDDASVVPLRDSGEV 680
           + +C D+ QLED  +  NNEDFEWEEVDG VDEREVLSMF +   D++A+ V L  S  +
Sbjct: 256 IPLCWDSLQLEDHRE--NNEDFEWEEVDGRVDEREVLSMFVD---DEEAASVSLSISPVI 310

Query: 679 ADGER-NLRAV----NLEWEVLLDVHNFEVNHGFGHEEEDGG--YVDHDEYT-TAENDML 524
           A  +  N+  V    NLEWEVLL+ +N + +    H++ +    + DHD+Y  TAE +ML
Sbjct: 311 APEDMVNVERVGGFGNLEWEVLLNANNLDSHADHDHDDRNAEPYFGDHDDYIYTAEYEML 370

Query: 523 FAQFGENENSFLGRPPASKAFVENLNSVLLTEEDVENDNVLCAVCKDEMNVGESAKQLPC 344
           F QF ENENS + RPPA+K+ VE L SV+LT+EDVE++N LCAVCKDE+NVGE AKQLPC
Sbjct: 371 FGQFAENENSLIVRPPAAKSVVEKLPSVVLTKEDVESNNALCAVCKDEINVGEKAKQLPC 430

Query: 343 SHRYHGDCIVPWLGIRNTCPVCRYELPTDDPDYEHRKRSHREVQV 209
           +HRYHGDCI+PWLGIRNTCPVCRYELPTDD DYE RK + R V V
Sbjct: 431 THRYHGDCILPWLGIRNTCPVCRYELPTDDADYERRKAAQRAVAV 475


>ref|XP_003550710.1| PREDICTED: uncharacterized protein LOC100814798 [Glycine max]
          Length = 355

 Score =  199 bits (506), Expect = 2e-48
 Identities = 113/216 (52%), Positives = 139/216 (64%), Gaps = 7/216 (3%)
 Frame = -1

Query: 859 LQICLDTFQLEDRVDGNNN-EDFEWEEVDGAVDEREVLSMFFEAEVDDDASV-VPLRDSG 686
           + +C D  QLE+  + NN  EDFEWEEV   +DER+V+SM     +DD  SV + + +  
Sbjct: 149 IPLCWDALQLEENNNNNNTYEDFEWEEV---MDERDVISM-----LDDTVSVSLGIEEET 200

Query: 685 EVADGERNLRAVN--LEWEVLLDVHNFEVNHGFGHEEEDGGYVDHDEYTTAENDMLFAQF 512
           E A  E +  +    LEW+VLL+  N E     G   E       D   TAE +M+F QF
Sbjct: 201 EAAAAEEDAESEVSILEWQVLLNSTNLE-----GPNSEPYFGDSEDFVYTAEYEMMFGQF 255

Query: 511 GENENSFLGRPPASKAFVENLNSVLLTEEDVENDN---VLCAVCKDEMNVGESAKQLPCS 341
             N+N+F G+PPAS + V +L SV++TE DV NDN   V+CAVCKDE  VGE  K LPCS
Sbjct: 256 --NDNAFNGKPPASASIVRSLPSVVVTEADVANDNNVVVVCAVCKDEFGVGEGVKVLPCS 313

Query: 340 HRYHGDCIVPWLGIRNTCPVCRYELPTDDPDYEHRK 233
           HRYHG+CIVPWLGIRNTCPVCRYE PTDD DYE RK
Sbjct: 314 HRYHGECIVPWLGIRNTCPVCRYEFPTDDADYERRK 349


>ref|XP_002871309.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317146|gb|EFH47568.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score =  196 bits (499), Expect = 1e-47
 Identities = 105/217 (48%), Positives = 143/217 (65%), Gaps = 8/217 (3%)
 Frame = -1

Query: 859 LQICLDTFQLEDRVDGNNNEDFEWEEVDGAV---DEREVLSMFFEAEVDDDASVV----P 701
           + +C D+ QLEDR  G   ++F+WEEVDG     DERE+ S F + + +D++SV     P
Sbjct: 162 IPLCWDSLQLEDR--GVTADEFDWEEVDGGGGVGDEREIRSGFAQVDFNDESSVSISVSP 219

Query: 700 LRDSGEVADGERNLRAVNLEWEVLLDVHNFEVNHGFGHEE-EDGGYVDHDEYTTAENDML 524
           +    ++   ER   + NL WEVLL+ H  E+N    + E   GG  DHD+Y   E +M 
Sbjct: 220 IVSLEDLVTRERAEGSGNLGWEVLLN-HTLEINFDVENRELYIGG--DHDDYIQ-EYEMF 275

Query: 523 FAQFGENENSFLGRPPASKAFVENLNSVLLTEEDVENDNVLCAVCKDEMNVGESAKQLPC 344
           F QF + E S +G PP SK+F+++L  V +  E+ ++D V+CAVCKDEMN+G  A QLPC
Sbjct: 276 FEQFADAEISVIGLPPTSKSFLKSLPMVRIGVENDDDDGVVCAVCKDEMNIGNEAVQLPC 335

Query: 343 SHRYHGDCIVPWLGIRNTCPVCRYELPTDDPDYEHRK 233
           +H+YH +CIVPWL +RNTCPVCRYELPTDD +YE RK
Sbjct: 336 NHKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQRK 372


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