BLASTX nr result

ID: Bupleurum21_contig00013586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013586
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   160   1e-37
ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   152   4e-35
emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]   143   2e-32

>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 548

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/107 (75%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
 Frame = -1

Query: 333 LTYADAVIGTAGSNISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQTAQQLVQNFM 154
           L+YADAVIGTAG++ISYIRRASGATVTIQETRGVPGEMTVEI+GTASQVQTAQQL+QNFM
Sbjct: 434 LSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 493

Query: 153 AEAGAGSQTNTGGSIDQGYNSFATPGSAY-TPPLNTEYTGQIGNYGA 16
           AEAGA +Q  TGGS DQGYN +A  GS Y +PP N  + G  G YG+
Sbjct: 494 AEAGAPTQAQTGGSTDQGYNPYAAHGSVYASPPSNPGHAGHTGGYGS 540


>ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|222857463|gb|EEE95010.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  155 bits (391), Expect = 4e-36
 Identities = 77/106 (72%), Positives = 89/106 (83%)
 Frame = -1

Query: 333 LTYADAVIGTAGSNISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQTAQQLVQNFM 154
           L+YADAVIGTAG++ISYIRRASGATVTIQETRGVPG MTVEI+GTASQVQTAQQL+QNFM
Sbjct: 279 LSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQLIQNFM 338

Query: 153 AEAGAGSQTNTGGSIDQGYNSFATPGSAYTPPLNTEYTGQIGNYGA 16
           AEAGA +Q  TGG+ DQGYN ++      +PP N E+TG  G YG+
Sbjct: 339 AEAGAPAQPQTGGAADQGYNPYSHSSVYASPPSNPEHTGHAGGYGS 384


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/106 (73%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
 Frame = -1

Query: 333 LTYADAVIGTAGSNISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQTAQQLVQNFM 154
           L+YADAVIGTAG++ISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQ AQQL+QNFM
Sbjct: 397 LSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM 456

Query: 153 AEAGAGSQTNTGGSIDQGYNSFATPGSAY-TPPLNTEYTGQIGNYG 19
           AEA A +Q   GGS DQGYNS+A  GS Y +P  N  +    G YG
Sbjct: 457 AEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGGYG 502


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/106 (73%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
 Frame = -1

Query: 333 LTYADAVIGTAGSNISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQTAQQLVQNFM 154
           L+YADAVIGTAG++ISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQ AQQL+QNFM
Sbjct: 328 LSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM 387

Query: 153 AEAGAGSQTNTGGSIDQGYNSFATPGSAY-TPPLNTEYTGQIGNYG 19
           AEA A +Q   GGS DQGYNS+A  GS Y +P  N  +    G YG
Sbjct: 388 AEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGGYG 433


>emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
          Length = 534

 Score =  143 bits (360), Expect = 2e-32
 Identities = 78/118 (66%), Positives = 86/118 (72%), Gaps = 13/118 (11%)
 Frame = -1

Query: 333 LTYADAVIGTAGSNISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQTAQQLVQ--- 163
           L+YADAVIGTAG++ISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQ AQQL+Q   
Sbjct: 408 LSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQALF 467

Query: 162 ---------NFMAEAGAGSQTNTGGSIDQGYNSFATPGSAY-TPPLNTEYTGQIGNYG 19
                    NFMAEA A +Q   GGS DQGYNS+A  GS Y +P  N  +    G YG
Sbjct: 468 LPVFDTKLLNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGGYG 525


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