BLASTX nr result

ID: Bupleurum21_contig00013574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013574
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521646.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_002324710.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_002332110.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11
ref|XP_003615134.1| Serine protease htrA-like protein [Medicago ...    68   1e-09
ref|XP_002324128.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07

>ref|XP_002521646.1| conserved hypothetical protein [Ricinus communis]
           gi|223539158|gb|EEF40753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 434

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 58/166 (34%), Positives = 87/166 (52%)
 Frame = -1

Query: 526 MSKSPGEHVFWNSGTVIECEEDAATHKFISXXXXXXXIFVRTNGVQPQDIKVDVHLFDGR 347
           +S S G+ +F  SGTVIE ++   T   I          +  N +    IKV VHL D  
Sbjct: 88  ISYSGGDEIFQGSGTVIESDD---TGGIILTSADLIRSPLSGNSIADA-IKVVVHLSDDV 143

Query: 346 VCQGKVFACDFHYNLAAIRIETDSALQTPTLKRLDDIVSIDPPELLHLSQDRSFQLRSHL 167
           +  G++ A DFHYN+  ++I+T + L    L+ LDD +++DP E++   QD+ FQLR H 
Sbjct: 144 LLDGQIVAFDFHYNIVVVKIQTKAPLTIACLRHLDDSITVDPSEVV---QDKPFQLRPHS 200

Query: 166 NLFKIFPGTKIITIERSIRSDVTLHVSSGVFSTNLFDPELDCNELY 29
           N + + PG ++I + R       L  + G FS N    E  C EL+
Sbjct: 201 NSYNLIPGDRVIALGRYFVKPHALMAAPGEFSIN--QCEYQCKELF 244


>ref|XP_002324710.1| predicted protein [Populus trichocarpa] gi|222866144|gb|EEF03275.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 53/163 (32%), Positives = 75/163 (46%)
 Frame = -1

Query: 520 KSPGEHVFWNSGTVIECEEDAATHKFISXXXXXXXIFVRTNGVQPQDIKVDVHLFDGRVC 341
           +  GE  F  +GT++ECE  A                + +    P +I V+VHL DG   
Sbjct: 44  RGSGEKCFACTGTIVECEGAAGDDGKFDATILTSASLLHSYR-DPSEITVEVHLSDGSSY 102

Query: 340 QGKVFACDFHYNLAAIRIETDSALQTPTLKRLDDIVSIDPPELLHLSQDRSFQLRSHLNL 161
           +G V A D HYN+A ++ + D   Q   LK +DD +S+ P        D +       N 
Sbjct: 103 EGDVSAFDLHYNIATVKFKPDKPPQKACLKWIDDSMSLQP------DNDHTM---VEANF 153

Query: 160 FKIFPGTKIITIERSIRSDVTLHVSSGVFSTNLFDPELDCNEL 32
           F + PG K+I + R       L VSSG FS  ++   LDC EL
Sbjct: 154 FNLCPGDKVIALARVQDHHHQLLVSSGDFS--IYCCGLDCQEL 194


>ref|XP_002332110.1| predicted protein [Populus trichocarpa] gi|222874930|gb|EEF12061.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
 Frame = -1

Query: 526 MSKSPGEHVFWNSGTVIECEEDAATH------KFI-----SXXXXXXXIFVRTNGVQPQD 380
           +S++ G+++   SGTV+ECE    +       +F+     S        + R   + P D
Sbjct: 59  LSRTGGKNLCRCSGTVVECERKQESGGGGGGGEFVATILTSANLLRFPSYSRYTFLAP-D 117

Query: 379 IKVDVHLFDGRVCQGKVFACDFHYNLAAIRIETDSALQTPTLKRLDDIVSIDPPELLHLS 200
           I V+V+L  G+  +G+V   DFHYNLA I+I TD  L T  L  +D  + + P  L  L+
Sbjct: 118 ITVEVYLSKGKPLKGQVLGYDFHYNLAIIQITTDYPLPTAILTDIDVSMPLTPTPL--LT 175

Query: 199 QDRSFQLRSHL---NLFKIFPGTKIITIERSIRSDVTLHVSSGVFSTNLFDPELDCNELY 29
             + F LR H    +LFK+  G K+I + R++     L V SG  S       L C EL 
Sbjct: 176 DSKPFGLRPHTVDSSLFKLRGGDKVIALARTLTCQCLL-VESGTLSI-YKSSGLHCQELL 233

Query: 28  Y 26
           Y
Sbjct: 234 Y 234


>ref|XP_003615134.1| Serine protease htrA-like protein [Medicago truncatula]
           gi|355516469|gb|AES98092.1| Serine protease htrA-like
           protein [Medicago truncatula]
          Length = 419

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/118 (31%), Positives = 63/118 (53%)
 Frame = -1

Query: 382 DIKVDVHLFDGRVCQGKVFACDFHYNLAAIRIETDSALQTPTLKRLDDIVSIDPPELLHL 203
           ++KV + L+DGR  +G+V A DFH+N+A I+ ++D +L T  L+++DD ++++P      
Sbjct: 139 NLKVKIFLYDGRSYEGQVRAYDFHFNIAWIQFQSDRSLPTAILRQVDDYINVNPAVAKLF 198

Query: 202 SQDRSFQLRSHLNLFKIFPGTKIITIERSIRSDVTLHVSSGVFSTNLFDPELDCNELY 29
                   R H + F + PG  I+ + R       L  + G F+    D   DC EL+
Sbjct: 199 RHH-----RRHSSRFNLVPGHPIVAVGRYFAKPFDLMAAPGQFTLGRCD--FDCKELF 249


>ref|XP_002324128.1| predicted protein [Populus trichocarpa] gi|222865562|gb|EEF02693.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
 Frame = -1

Query: 490 SGTVI--ECEEDAA-THKFISXXXXXXXIFVRTNGVQPQ-----DIKVDVHLFDGRVCQG 335
           SGT+I  + EE+ + TH  ++           T+   P       IKV V+L  G   +G
Sbjct: 91  SGTIIGSKLEENGSFTHTILTSANLLITRAASTSEDHPPLAPEPGIKVYVYLSSGDSFEG 150

Query: 334 KVFACDFHYNLAAIRIETDSALQTPTLKRLDDIVSIDPPELLHLSQDRSFQLRSHL---N 164
           ++F  +FHYN+A I+ ++ S   T  LK +D  + +     L   Q  SF LR H    +
Sbjct: 151 EIFGFNFHYNIAIIKFKSSSRFPTAILKHIDGSIPLTTKAEL---QYTSFGLRPHAEPSD 207

Query: 163 LFKIFPGTKIITIERSIRSDVTLHVSSGVFSTNLFDPEL 47
           LF + PG K+I + R   S  +L V+ G F   +  P L
Sbjct: 208 LFNLCPGEKVIALGRHYLSH-SLMVAPGAFRPGVRRPGL 245


Top