BLASTX nr result

ID: Bupleurum21_contig00013563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013563
         (1511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchor...   600   e-169
emb|CBI19031.3| unnamed protein product [Vitis vinifera]              592   e-167
ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|2...   592   e-167
gb|ACD56618.1| peptidoglycan-binding LysM domain-containing rela...   583   e-164
ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchor...   582   e-163

>ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchored protein 1 [Vitis
            vinifera]
          Length = 418

 Score =  600 bits (1547), Expect = e-169
 Identities = 292/358 (81%), Positives = 324/358 (90%), Gaps = 1/358 (0%)
 Frame = +1

Query: 145  KSTIEPCSNSDSCNSLLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVENHILP 324
            KSTIEPCSNSDSCN+++GYTLYTDLKVSEVA+LFQ+DPIA+LTANAIDISYPDVENHILP
Sbjct: 27   KSTIEPCSNSDSCNAMVGYTLYTDLKVSEVATLFQVDPIAILTANAIDISYPDVENHILP 86

Query: 325  SQLFLKIPISCSCVDGIRKSVSTHYKTRPSDTLSTIADSIYGGLVSADQLKEANSVSDPS 504
            SQLFLKIPI CSCVDGIRKSV+T YKTRPSDTLS+IADSIY GLVSADQL+EANS+SDPS
Sbjct: 87   SQLFLKIPIYCSCVDGIRKSVTTRYKTRPSDTLSSIADSIYAGLVSADQLREANSISDPS 146

Query: 505  VLDVGQNLVVPLPCTCFNGTDNNLPAIYMSYVVKTVDTLSNIALRYSTTLTDLMTVNALG 684
            VLDVGQ LVVPLPCTCFNGTDN LPA Y+SYVVK  DTL+ IA RYSTT++DLMTVNA+G
Sbjct: 147  VLDVGQTLVVPLPCTCFNGTDNLLPATYLSYVVKVDDTLTGIASRYSTTISDLMTVNAMG 206

Query: 685  GPAIKDGDILAIPLSACPSSFPRYASDYALMVPNGSYAITASHCVQCSCVPGSRNLYCMP 864
             PAIK GDILA+PL AC S+FP+YASDY L VPNGSYAITASHCVQCSC PGS NLYCMP
Sbjct: 207  SPAIKAGDILAVPLPACASNFPKYASDYGLAVPNGSYAITASHCVQCSCGPGSLNLYCMP 266

Query: 865  ASLAVSCSSMQCKNSNLMLGNVTMQQSSAGCNVTSCNYGGFVNGTIITTLSASLQPRCPG 1044
            ASLAVSCSSMQC+N+NLMLGNVTMQ+SSAGCNVTSC+YGGFVNGTII TL+ SLQPRCPG
Sbjct: 267  ASLAVSCSSMQCRNTNLMLGNVTMQKSSAGCNVTSCSYGGFVNGTIIATLTTSLQPRCPG 326

Query: 1045 PQLFPPLIAPPTVVGPDLLFSPAPSPMQSGGPGASIPN-NVVPSTGTVLGFPPANGPT 1215
             Q FPPLIAPP+ V  D  ++P+PSP QS G G +IP+ +VVPSTG++ GF PANGPT
Sbjct: 327  IQQFPPLIAPPSSVIRDSFYAPSPSPSQSDGAGTTIPSPSVVPSTGSIPGFAPANGPT 384


>emb|CBI19031.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score =  592 bits (1527), Expect = e-167
 Identities = 287/355 (80%), Positives = 321/355 (90%), Gaps = 1/355 (0%)
 Frame = +1

Query: 154  IEPCSNSDSCNSLLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVENHILPSQL 333
            ++PCSNSDSCN+++GYTLYTDLKVSEVA+LFQ+DPIA+LTANAIDISYPDVENHILPSQL
Sbjct: 20   MDPCSNSDSCNAMVGYTLYTDLKVSEVATLFQVDPIAILTANAIDISYPDVENHILPSQL 79

Query: 334  FLKIPISCSCVDGIRKSVSTHYKTRPSDTLSTIADSIYGGLVSADQLKEANSVSDPSVLD 513
            FLKIPI CSCVDGIRKSV+T YKTRPSDTLS+IADSIY GLVSADQL+EANS+SDPSVLD
Sbjct: 80   FLKIPIYCSCVDGIRKSVTTRYKTRPSDTLSSIADSIYAGLVSADQLREANSISDPSVLD 139

Query: 514  VGQNLVVPLPCTCFNGTDNNLPAIYMSYVVKTVDTLSNIALRYSTTLTDLMTVNALGGPA 693
            VGQ LVVPLPCTCFNGTDN LPA Y+SYVVK  DTL+ IA RYSTT++DLMTVNA+G PA
Sbjct: 140  VGQTLVVPLPCTCFNGTDNLLPATYLSYVVKVDDTLTGIASRYSTTISDLMTVNAMGSPA 199

Query: 694  IKDGDILAIPLSACPSSFPRYASDYALMVPNGSYAITASHCVQCSCVPGSRNLYCMPASL 873
            IK GDILA+PL AC S+FP+YASDY L VPNGSYAITASHCVQCSC PGS NLYCMPASL
Sbjct: 200  IKAGDILAVPLPACASNFPKYASDYGLAVPNGSYAITASHCVQCSCGPGSLNLYCMPASL 259

Query: 874  AVSCSSMQCKNSNLMLGNVTMQQSSAGCNVTSCNYGGFVNGTIITTLSASLQPRCPGPQL 1053
            AVSCSSMQC+N+NLMLGNVTMQ+SSAGCNVTSC+YGGFVNGTII TL+ SLQPRCPG Q 
Sbjct: 260  AVSCSSMQCRNTNLMLGNVTMQKSSAGCNVTSCSYGGFVNGTIIATLTTSLQPRCPGIQQ 319

Query: 1054 FPPLIAPPTVVGPDLLFSPAPSPMQSGGPGASIPN-NVVPSTGTVLGFPPANGPT 1215
            FPPLIAPP+ V  D  ++P+PSP QS G G +IP+ +VVPSTG++ GF PANGPT
Sbjct: 320  FPPLIAPPSSVIRDSFYAPSPSPSQSDGAGTTIPSPSVVPSTGSIPGFAPANGPT 374


>ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|222842720|gb|EEE80267.1|
            predicted protein [Populus trichocarpa]
          Length = 412

 Score =  592 bits (1526), Expect = e-167
 Identities = 289/361 (80%), Positives = 317/361 (87%), Gaps = 2/361 (0%)
 Frame = +1

Query: 136  VVPKSTIEPCSNSDSCNSLLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVENH 315
            V  KSTIEPC+NSDSCN+LL YTLYTDLKVSEVASLFQIDPIALLT NAIDISYPDVENH
Sbjct: 20   VTSKSTIEPCTNSDSCNALLAYTLYTDLKVSEVASLFQIDPIALLTTNAIDISYPDVENH 79

Query: 316  ILPSQLFLKIPISCSCVDGIRKSVSTHYKTRPSDTLSTIADSIYGGLVSADQLKEANSVS 495
            ILPSQLFLKIPI+CSCVDGIRKSVSTHYKTRPSDTLS+IADSIY GLVSADQ+KEANS+ 
Sbjct: 80   ILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYAGLVSADQIKEANSID 139

Query: 496  DPSVLDVGQNLVVPLPCTCFNGTDNNLPAIYMSYVVKTVDTLSNIALRYSTTLTDLMTVN 675
            DPSVLDVGQ+LVVPLPCTCFNGTDN+LPAIY+SYVVK VDTL+ IA RY TTLTDLM VN
Sbjct: 140  DPSVLDVGQSLVVPLPCTCFNGTDNSLPAIYLSYVVKEVDTLAAIAARYETTLTDLMNVN 199

Query: 676  ALGGPAIKDGDILAIPLSACPSSFPRYASDYALMVPNGSYAITASHCVQCSCVPGSRNLY 855
            A+G  AIK GDILA+PL AC S FPRYASD+ L+VPNGSYAI+ASHCVQCSC PG+ NLY
Sbjct: 200  AMGSAAIKAGDILAVPLPACASKFPRYASDFGLIVPNGSYAISASHCVQCSCGPGNLNLY 259

Query: 856  CMPASLAVSCSSMQCKNSNLMLGNVTMQQSSAGCNVTSCNYGGFVNGTIITTLSASLQPR 1035
            CMPASLAVSCSSMQC+NSNLMLGNVT+QQSSAGCNVTSCNYGG+VNGTI+TTLS  LQPR
Sbjct: 260  CMPASLAVSCSSMQCRNSNLMLGNVTVQQSSAGCNVTSCNYGGYVNGTIMTTLSTYLQPR 319

Query: 1036 CPGPQLFPPLIAPPTVVGPDLLFSPAPSPMQSGG--PGASIPNNVVPSTGTVLGFPPANG 1209
            CPG Q FPPL+ PPT V  D  F+PAP+P   G   P  +    VVP+TG++ G PPA+G
Sbjct: 320  CPGSQQFPPLVVPPTTVIRDSTFAPAPAPQSDGSSTPTPTPKTEVVPATGSLPGLPPASG 379

Query: 1210 P 1212
            P
Sbjct: 380  P 380


>gb|ACD56618.1| peptidoglycan-binding LysM domain-containing related protein
            [Gossypioides kirkii]
          Length = 453

 Score =  583 bits (1503), Expect = e-164
 Identities = 284/359 (79%), Positives = 315/359 (87%)
 Frame = +1

Query: 136  VVPKSTIEPCSNSDSCNSLLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVENH 315
            V  KSTIEPCSNSDSCN+LLGYTLYTDLKV+EVASLFQ+DPI++LTANAIDISYPDVENH
Sbjct: 26   VTSKSTIEPCSNSDSCNALLGYTLYTDLKVAEVASLFQVDPISILTANAIDISYPDVENH 85

Query: 316  ILPSQLFLKIPISCSCVDGIRKSVSTHYKTRPSDTLSTIADSIYGGLVSADQLKEANSVS 495
            ILPS+LFLKIPI CSCVDGIRKSVST YKTRP DTLS+IADSIY GLVSADQ++EANS+S
Sbjct: 86   ILPSKLFLKIPILCSCVDGIRKSVSTKYKTRPQDTLSSIADSIYAGLVSADQIREANSIS 145

Query: 496  DPSVLDVGQNLVVPLPCTCFNGTDNNLPAIYMSYVVKTVDTLSNIALRYSTTLTDLMTVN 675
            DPSVLDVG+NLVVPLPCTCFNGTDN LPAIY+SYVVK VDTL+ IA  YSTT+TDLM VN
Sbjct: 146  DPSVLDVGENLVVPLPCTCFNGTDNGLPAIYLSYVVKAVDTLAGIAASYSTTITDLMNVN 205

Query: 676  ALGGPAIKDGDILAIPLSACPSSFPRYASDYALMVPNGSYAITASHCVQCSCVPGSRNLY 855
            A+G  +IK GDILA+PLSAC S+FPRYASDY L+VPNGSYAITASHCVQCSC  GSRNLY
Sbjct: 206  AMGSTSIKAGDILAVPLSACASNFPRYASDYGLIVPNGSYAITASHCVQCSCGLGSRNLY 265

Query: 856  CMPASLAVSCSSMQCKNSNLMLGNVTMQQSSAGCNVTSCNYGGFVNGTIITTLSASLQPR 1035
            CMP+SLAVSCSSMQCK+SNL LGNVT+QQS+AGCNVTSC YGG+ NGTIIT LS+SLQPR
Sbjct: 266  CMPSSLAVSCSSMQCKSSNLKLGNVTVQQSTAGCNVTSCAYGGYANGTIITWLSSSLQPR 325

Query: 1036 CPGPQLFPPLIAPPTVVGPDLLFSPAPSPMQSGGPGASIPNNVVPSTGTVLGFPPANGP 1212
            CPGPQ FPPL+APPT V  D  F+PAP+P   GG   ++P   VPSTG+  G  PA  P
Sbjct: 326  CPGPQQFPPLVAPPTHVTRDSAFAPAPAPQSDGGTTTTVP-KTVPSTGSHPGLGPAGAP 383


>ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
            [Cucumis sativus] gi|449528597|ref|XP_004171290.1|
            PREDICTED: lysM domain-containing GPI-anchored protein
            1-like [Cucumis sativus]
          Length = 432

 Score =  582 bits (1499), Expect = e-163
 Identities = 280/360 (77%), Positives = 316/360 (87%), Gaps = 1/360 (0%)
 Frame = +1

Query: 136  VVPKSTIEPCSNSDSCNSLLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVENH 315
            V  KSTIEPCSNSDSCN+LLGYTLYTDLKVSEV SLFQ+DPI++LTANAID+SYPDVENH
Sbjct: 31   VSAKSTIEPCSNSDSCNALLGYTLYTDLKVSEVGSLFQVDPISILTANAIDVSYPDVENH 90

Query: 316  ILPSQLFLKIPISCSCVDGIRKSVSTHYKTRPSDTLSTIADSIYGGLVSADQLKEANSVS 495
            ILPSQLF+KIPISCSCVDGIRKSVST YKTRPSDTLS+IADSIY GLVS+DQ++EANS+S
Sbjct: 91   ILPSQLFIKIPISCSCVDGIRKSVSTRYKTRPSDTLSSIADSIYAGLVSSDQIREANSIS 150

Query: 496  DPSVLDVGQNLVVPLPCTCFNGTDNNLPAIYMSYVVKTVDTLSNIALRYSTTLTDLMTVN 675
            DPS+LDVGQ LVVPLPCTCFNGTDN+LPAIY+SYVV+  DTL+ IA RYSTT+TDLM VN
Sbjct: 151  DPSLLDVGQTLVVPLPCTCFNGTDNSLPAIYLSYVVQPEDTLTGIAFRYSTTITDLMDVN 210

Query: 676  ALGGPAIKDGDILAIPLSACPSSFPRYASDYALMVPNGSYAITASHCVQCSCVPGSRNLY 855
            A+G PAIK GDILA+PL AC S FP YASD+ L+VPNGSYAITASHCVQCSC PG+ N+Y
Sbjct: 211  AMGNPAIKAGDILAVPLPACASKFPSYASDFGLIVPNGSYAITASHCVQCSCGPGNLNMY 270

Query: 856  CMPASLAVSCSSMQCKNSNLMLGNVTMQQSSAGCNVTSCNYGGFVNGTIITTLSASLQPR 1035
            CMPA  AVSCSSMQCKNSNLMLGNVT QQSSAGCNVTSC+YGGFVNGTI+T LS++LQPR
Sbjct: 271  CMPAPFAVSCSSMQCKNSNLMLGNVTAQQSSAGCNVTSCSYGGFVNGTILTMLSSNLQPR 330

Query: 1036 CPGPQLFPPLIAPPTVVGPDLLFSPAPSPMQSGGPGASIPNNVVPS-TGTVLGFPPANGP 1212
            CPGPQ FPPL APPT V  D  F+PAP+P   G    +  + ++PS TG++ G PPA+GP
Sbjct: 331  CPGPQQFPPLKAPPTTVSRDKNFAPAPAPQFDGSGSPAPSSGLIPSTTGSLPGLPPASGP 390


Top