BLASTX nr result

ID: Bupleurum21_contig00013555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013555
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoli...    78   7e-13
ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like pr...    75   7e-12
ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Popu...    74   1e-11
ref|XP_002318746.1| hypothetical protein POPTRDRAFT_570289 [Popu...    73   3e-11
ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like pr...    72   6e-11

>gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoliata]
          Length = 379

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/126 (33%), Positives = 60/126 (47%)
 Frame = -2

Query: 380 EPLSHAGSFFPGHQGTRMFQFYNPQADSNTTVGNPMWAGMVKTEEDTKLYNHPSHSQLPD 201
           +PLS  G+F   +QG  +  F +     + TV  P W G+V TE D + YN      LPD
Sbjct: 165 DPLSRTGTFLSNYQGASLLPFSSSHMYPSATVVKPTWTGVVNTEADARCYNEHHRLNLPD 224

Query: 200 KHNPYSEYSLSRDKREKQHSFMNNTNLVLSNQSSAEASVCQPLLXXXXXXXXXXXXSRMF 21
           + N +     S  K  KQ +F+   N   ++Q+S EASV QPLL              +F
Sbjct: 225 ERNLFLRSPSSSYKTGKQFTFLQGDNSTFNSQTSPEASVSQPLLGTANLSDRSGASHNVF 284

Query: 20  YDGFST 3
           +D  +T
Sbjct: 285 HDRSTT 290


>ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like protein 16 [Vitis
           vinifera] gi|147820985|emb|CAN63524.1| hypothetical
           protein VITISV_001644 [Vitis vinifera]
          Length = 389

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/126 (38%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
 Frame = -2

Query: 380 EPLS-HAGSFFPGHQGTRMFQFYNPQADSNTTVGNPMWAGMVKTEEDTKLYNHPSHSQLP 204
           EPLS  +G F   HQGTR+  F NPQ    +      WAG +KTE D  LYN        
Sbjct: 168 EPLSITSGRFLSSHQGTRLLAFSNPQVFPASAGVTSAWAGNIKTENDAVLYNSHQQLNFM 227

Query: 203 DKHNPYSEYSLSRDKREKQHSFMNNTNLVLSNQSSAEASVCQPLLXXXXXXXXXXXXSRM 24
           D+ N + E S SR  R KQ  F+   N  L        SVCQPLL             +M
Sbjct: 228 DRQNSFPE-SFSRSYRGKQFPFLQGPNPTLPG-----TSVCQPLLDPSSASGNGSGGQKM 281

Query: 23  FYDGFS 6
           F DG +
Sbjct: 282 FSDGLN 287


>ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Populus trichocarpa]
           gi|222869269|gb|EEF06400.1| hypothetical protein
           POPTRDRAFT_733659 [Populus trichocarpa]
          Length = 381

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/104 (41%), Positives = 60/104 (57%)
 Frame = -2

Query: 380 EPLSHAGSFFPGHQGTRMFQFYNPQADSNTTVGNPMWAGMVKTEEDTKLYNHPSHSQLPD 201
           +P S   SF   +QGT++F F +     ++TV NP W+G+  TE D +   H +  QLPD
Sbjct: 171 DPHSRPPSFLSNYQGTQLFPFSSSHVYPSSTVLNPTWSGVASTEADGR---HHNLHQLPD 227

Query: 200 KHNPYSEYSLSRDKREKQHSFMNNTNLVLSNQSSAEASVCQPLL 69
           K N +   S S     KQ  F++  +  L+NQ+S EASVCQPLL
Sbjct: 228 KQNLFFGSSSSSYHGVKQFPFLHWHSPGLNNQTSPEASVCQPLL 271


>ref|XP_002318746.1| hypothetical protein POPTRDRAFT_570289 [Populus trichocarpa]
           gi|222859419|gb|EEE96966.1| hypothetical protein
           POPTRDRAFT_570289 [Populus trichocarpa]
          Length = 346

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/103 (42%), Positives = 56/103 (54%)
 Frame = -2

Query: 380 EPLSHAGSFFPGHQGTRMFQFYNPQADSNTTVGNPMWAGMVKTEEDTKLYNHPSHSQLPD 201
           +P SH  SF P HQGT++F F +     +T V N  W+G+  TE D   YN     QLPD
Sbjct: 187 DPFSHPPSFLPNHQGTQIFPFSSSHVYHSTAVVNSTWSGVANTEADGGHYN---LHQLPD 243

Query: 200 KHNPYSEYSLSRDKREKQHSFMNNTNLVLSNQSSAEASVCQPL 72
           K N +   S +  K  K   F+   N  L+NQ+S EASVC PL
Sbjct: 244 KQNLFLGSSSNSYKGGKLFPFLQCDNPCLNNQTS-EASVCLPL 285


>ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like protein 13 [Vitis
           vinifera] gi|147837620|emb|CAN77059.1| hypothetical
           protein VITISV_022138 [Vitis vinifera]
           gi|297734432|emb|CBI15679.3| unnamed protein product
           [Vitis vinifera]
          Length = 377

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 49/125 (39%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
 Frame = -2

Query: 380 EPLSHAGSFFPGHQGTRMFQFYNPQADSNTTVGNPMW-AGMVKTEEDTKLYNHPSHSQLP 204
           EPLS  GSF   +QG+ +  F +P     T + +P W AG+VKTEE   LYN   H QLP
Sbjct: 170 EPLSRPGSFLTNYQGSGLLPFSSPHLYPTTAMMSPNWGAGLVKTEEGAILYNQ--HQQLP 227

Query: 203 --DKHNPYSEYSLSRDKREKQHSFMNNTNLVLSNQSSAEASVCQPLLXXXXXXXXXXXXS 30
             +K + +   S S  K  KQ +F+   +  LSN +++EA VCQPL              
Sbjct: 228 LLEKQHLHLGSSSSFYKGGKQLTFLQADHPSLSNYTTSEAPVCQPL---------AGHGC 278

Query: 29  RMFYD 15
           +MFYD
Sbjct: 279 KMFYD 283


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