BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013548
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              402   e-110
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   393   e-107
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   388   e-105
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   387   e-105
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   382   e-104

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  402 bits (1034), Expect = e-110
 Identities = 198/302 (65%), Positives = 242/302 (80%)
 Frame = +2

Query: 5    DTLGTTIQVQSSGLAAEVSVRSSTVNTGFALQFSFKDLKARRDHRMSKLKAISSSREGIK 184
            D  G    VQ + +  +  + SS +     LQFSF++L+ RR  R+S+L++ S       
Sbjct: 533  DLSGVASAVQDTPVL-DTPMPSSDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGRTT 591

Query: 185  SEACYTAATLELSQQGNSSGKEXXXXXXTNELERHFNKKDFGRMKVIGQFNLGFIVGKLD 364
            +E CY+AATLE SQ  N   K       T ELE+ F K+DFGRMKVIGQFNLGFI+GKLD
Sbjct: 592  TERCYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLD 651

Query: 365  KDLFIVDQHAADEKHNYERLSLSTILNQQPLLRPMMVELSPEEEIVVTMHMDTIRKNGFA 544
            +DLFIVDQHAADEK+N+E L+ ST+LNQQPLLRP+ ++LSPEEE++ ++HMD IRKNGFA
Sbjct: 652  QDLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFA 711

Query: 545  LEEDLHAPLGKRFKLRAVPFSKNITFGVSDVKELISILADSQGECSMIGSYRMDTPDSVC 724
            LEEDLHAP G+RFKL+AVPFSKNITFGV DVKELIS LAD QGECS++G+Y+MDT DS+C
Sbjct: 712  LEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSIC 771

Query: 725  PPRVRSMLASRACKSSVMIGDPLSRNEMQKIVKHLADLKSPWNCPHGRPTMRHLVDLTTL 904
            P RVR+MLASRAC+SSVMIGDPL R EMQ+I++HL+DLKSPWNCPHGRPTMRHLVDLTT+
Sbjct: 772  PSRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTI 831

Query: 905  HK 910
            +K
Sbjct: 832  YK 833


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
            gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
            pms2, putative [Ricinus communis]
          Length = 924

 Score =  393 bits (1009), Expect = e-107
 Identities = 205/313 (65%), Positives = 240/313 (76%), Gaps = 2/313 (0%)
 Frame = +2

Query: 5    DTLGTTIQVQSSGLAAEVSVRSSTVNTGFALQFSFKDLKARRDHRMSKLKAISSSREGIK 184
            D + T   +QSS    +V  + S       LQF+F++LKA+R  R S L+    +  G+K
Sbjct: 613  DLILTAPPLQSSSALLDVP-KPSAHEICSTLQFNFQELKAKRQQRRSILQFSGYASGGMK 671

Query: 185  --SEACYTAATLELSQQGNSSGKEXXXXXXTNELERHFNKKDFGRMKVIGQFNLGFIVGK 358
              S   Y AATLELSQ  N   K       T ELER F K+DFGRMKVIGQFNLGFI+GK
Sbjct: 672  MKSHRTYAAATLELSQPDNEERKARALAAATTELERIFRKQDFGRMKVIGQFNLGFIIGK 731

Query: 359  LDKDLFIVDQHAADEKHNYERLSLSTILNQQPLLRPMMVELSPEEEIVVTMHMDTIRKNG 538
            LD+DLFIVDQHAADEK+N+E L  STILNQQPLLR + +ELSPEEE+V +M+M+ IRKNG
Sbjct: 732  LDQDLFIVDQHAADEKYNFEHLCQSTILNQQPLLRSLRLELSPEEEVVASMNMELIRKNG 791

Query: 539  FALEEDLHAPLGKRFKLRAVPFSKNITFGVSDVKELISILADSQGECSMIGSYRMDTPDS 718
            FALEED HAP G RFKL+AVPFSKNITFGV DVK+LIS LADSQG+CS+IGSY+MD  DS
Sbjct: 792  FALEEDPHAPPGHRFKLKAVPFSKNITFGVEDVKDLISTLADSQGDCSIIGSYKMDKSDS 851

Query: 719  VCPPRVRSMLASRACKSSVMIGDPLSRNEMQKIVKHLADLKSPWNCPHGRPTMRHLVDLT 898
            VCP RVR+MLASRAC+SSVMIGDPL RNEMQKI++HLADL SPWNCPHGRPTMRHLVD+T
Sbjct: 852  VCPSRVRTMLASRACRSSVMIGDPLGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDMT 911

Query: 899  TLHKRLDPEDEEL 937
            +++KR    D  L
Sbjct: 912  SIYKRSYENDLSL 924


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  388 bits (996), Expect = e-105
 Identities = 194/303 (64%), Positives = 233/303 (76%), Gaps = 22/303 (7%)
 Frame = +2

Query: 68   SSTVNTGFALQFSFKDLKARRDHRMSKLKAISSSREGIKSEACYTAATLELSQQGNSSGK 247
            SS +     LQFSF++L+ RR  R+S+L++ S       +E CY+AATLE SQ  N   K
Sbjct: 3353 SSDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGRTTTERCYSAATLEFSQPENEERK 3412

Query: 248  EXXXXXXTNELERHFNKKDFGRMKVIGQFNLGFIVGKLDKDLFIVDQHAADEKHNYERLS 427
                   T ELE+ F K+DFGRMKVIGQFNLGFI+GKLD+DLFIVDQHAADEK+N+E L+
Sbjct: 3413 VRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLA 3472

Query: 428  LSTILNQQPLLR----------------------PMMVELSPEEEIVVTMHMDTIRKNGF 541
             ST+LNQQPLLR                      P+ ++LSPEEE++  +HMD IRKNGF
Sbjct: 3473 QSTVLNQQPLLRYGVQNIHEVTSIELLCVSYTIGPLRLDLSPEEEVIAFIHMDIIRKNGF 3532

Query: 542  ALEEDLHAPLGKRFKLRAVPFSKNITFGVSDVKELISILADSQGECSMIGSYRMDTPDSV 721
            ALEEDLHAP G+RFKL+AVPFSKNITFGV DVKELIS LAD QGECS++G+Y+MDT DS+
Sbjct: 3533 ALEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSI 3592

Query: 722  CPPRVRSMLASRACKSSVMIGDPLSRNEMQKIVKHLADLKSPWNCPHGRPTMRHLVDLTT 901
            CP RVR+MLASRAC+SSVMIGDPL R EMQ+I++HL+DLKSPWNCPHGRPTMRHLVDLTT
Sbjct: 3593 CPSRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTT 3652

Query: 902  LHK 910
            ++K
Sbjct: 3653 IYK 3655


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  387 bits (995), Expect = e-105
 Identities = 194/302 (64%), Positives = 233/302 (77%)
 Frame = +2

Query: 5    DTLGTTIQVQSSGLAAEVSVRSSTVNTGFALQFSFKDLKARRDHRMSKLKAISSSREGIK 184
            D  G    VQ + +  +  + SS +     LQFSF++L+ RR  R               
Sbjct: 634  DLSGVASAVQDTPVL-DTPMPSSDLKICSTLQFSFEELRTRRHQR--------------- 677

Query: 185  SEACYTAATLELSQQGNSSGKEXXXXXXTNELERHFNKKDFGRMKVIGQFNLGFIVGKLD 364
               CY+AATLE SQ  N   K       T ELE+ F K+DFGRMKVIGQFNLGFI+GKLD
Sbjct: 678  ---CYSAATLEFSQPENEERKVRALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLD 734

Query: 365  KDLFIVDQHAADEKHNYERLSLSTILNQQPLLRPMMVELSPEEEIVVTMHMDTIRKNGFA 544
            +DLFIVDQHAADEK+N+E L+ ST+LNQQPLLRP+ ++LSPEEE++ ++HMD IRKNGFA
Sbjct: 735  QDLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFA 794

Query: 545  LEEDLHAPLGKRFKLRAVPFSKNITFGVSDVKELISILADSQGECSMIGSYRMDTPDSVC 724
            LEEDLHAP G+RFKL+AVPFSKNITFGV DVKELIS LAD QGECS++G+Y+MDT DS+C
Sbjct: 795  LEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSIC 854

Query: 725  PPRVRSMLASRACKSSVMIGDPLSRNEMQKIVKHLADLKSPWNCPHGRPTMRHLVDLTTL 904
            P RVR+MLASRAC+SSVMIGDPL R EMQ+I++HL+DLKSPWNCPHGRPTMRHLVDLTT+
Sbjct: 855  PSRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTI 914

Query: 905  HK 910
            +K
Sbjct: 915  YK 916


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  382 bits (982), Expect = e-104
 Identities = 198/303 (65%), Positives = 233/303 (76%), Gaps = 1/303 (0%)
 Frame = +2

Query: 32   QSSGLAAEVSVRSSTVNTGFALQFSFKDLKARRDHRMSKLKAISSSREGIK-SEACYTAA 208
            QSS    +  V  S       LQFSF+DL +RR  R+S+L++   +  G K S   Y AA
Sbjct: 613  QSSIELLDAPVPFSAQQICSTLQFSFQDLHSRRMQRLSRLQSGKFTFGGSKRSHRSYAAA 672

Query: 209  TLELSQQGNSSGKEXXXXXXTNELERHFNKKDFGRMKVIGQFNLGFIVGKLDKDLFIVDQ 388
            TLELSQ  N   K       T ELER F K+DFGRMKVIGQFNLGFI+GKLD+DLFIVDQ
Sbjct: 673  TLELSQPDNEERKLRALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQ 732

Query: 389  HAADEKHNYERLSLSTILNQQPLLRPMMVELSPEEEIVVTMHMDTIRKNGFALEEDLHAP 568
            HAADEK+N+ERL  STILNQQPLLRP+ +ELSPEEE+V +M++D IRKNGFALEED HA 
Sbjct: 733  HAADEKYNFERLCQSTILNQQPLLRPLRLELSPEEEVVASMNLDIIRKNGFALEEDPHAL 792

Query: 569  LGKRFKLRAVPFSKNITFGVSDVKELISILADSQGECSMIGSYRMDTPDSVCPPRVRSML 748
             G  FKL+AVPFSKNITFGV DVK+LIS LADSQGECS+I  Y+MDT DSVCP RV +M 
Sbjct: 793  PGHHFKLKAVPFSKNITFGVEDVKDLISTLADSQGECSIISRYKMDTADSVCPSRVHAMF 852

Query: 749  ASRACKSSVMIGDPLSRNEMQKIVKHLADLKSPWNCPHGRPTMRHLVDLTTLHKRLDPED 928
            ASRAC+SSVMIGD L RNEMQKI++HL DLKSPWNCPHGRPTMRHL+D++++++R D  +
Sbjct: 853  ASRACRSSVMIGDALGRNEMQKILEHLVDLKSPWNCPHGRPTMRHLIDMSSIYERPDETE 912

Query: 929  EEL 937
              L
Sbjct: 913  AGL 915