BLASTX nr result

ID: Bupleurum21_contig00013537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013537
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   100   9e-20
ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cuc...    95   5e-18
dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]...    93   3e-17
ref|XP_002302948.1| high mobility group family [Populus trichoca...    92   6e-17
gb|ACJ83992.1| unknown [Medicago truncatula] gi|388511479|gb|AFK...    91   1e-16

>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/74 (66%), Positives = 59/74 (79%)
 Frame = +3

Query: 144 MATEEVSKPPSLPPYPEMIMAAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 323
           MATEEV+KPPSLPPYPEM+M A+DA  ++  G  K+AISKY+ESTYGELP GH  L+  H
Sbjct: 1   MATEEVNKPPSLPPYPEMVMKALDAL-NEPSGSNKSAISKYIESTYGELPDGHATLLAHH 59

Query: 324 LNTMKQNGDLVLLK 365
           LN MK +G+LV LK
Sbjct: 60  LNKMKDSGELVFLK 73


>ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
           gi|449484561|ref|XP_004156916.1| PREDICTED:
           HMG-Y-related protein A-like [Cucumis sativus]
          Length = 180

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = +3

Query: 144 MATEEVSKPPSLPPYPEMIMAAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 323
           MAT+EV+KPPSLPPYPEMI  A++A  +  +G  K+ ISKY+ESTYG LP GH +L+T H
Sbjct: 1   MATQEVNKPPSLPPYPEMIFRAIEAL-NSDNGSNKSTISKYIESTYGNLPTGHSSLLTHH 59

Query: 324 LNTMKQNGDLVLLK 365
           LN MK +GDLV  K
Sbjct: 60  LNMMKASGDLVFWK 73


>dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]
           gi|1483175|dbj|BAA13134.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/74 (62%), Positives = 58/74 (78%)
 Frame = +3

Query: 144 MATEEVSKPPSLPPYPEMIMAAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 323
           MATEEV+KPPSLPPY EMI  A+D+  ++ +G  K+AISKY+EST GELP GH  L+  H
Sbjct: 1   MATEEVNKPPSLPPYTEMITKALDSL-NEPNGSNKSAISKYIESTCGELPDGHSTLLAHH 59

Query: 324 LNTMKQNGDLVLLK 365
           LN MK++G+LV LK
Sbjct: 60  LNKMKESGELVFLK 73


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/74 (58%), Positives = 58/74 (78%)
 Frame = +3

Query: 144 MATEEVSKPPSLPPYPEMIMAAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 323
           MA EE++KPPSLPPYPEMI++A++A  ++ +G  K +ISKY+ES YG+LPAGH  L++ H
Sbjct: 1   MAAEEINKPPSLPPYPEMILSAIEAL-NEANGCNKTSISKYIESKYGDLPAGHTALLSHH 59

Query: 324 LNTMKQNGDLVLLK 365
           LN MK  G+LV  K
Sbjct: 60  LNRMKDTGELVFWK 73


>gb|ACJ83992.1| unknown [Medicago truncatula] gi|388511479|gb|AFK43801.1| unknown
           [Medicago truncatula]
          Length = 193

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/74 (59%), Positives = 56/74 (75%)
 Frame = +3

Query: 144 MATEEVSKPPSLPPYPEMIMAAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 323
           MAT+EV+KP SLPPYPEMIM A++A  ++ +G  K++IS Y+ES YGELP GH  ++  H
Sbjct: 1   MATQEVNKPLSLPPYPEMIMKALEAL-NEPNGSNKSSISNYIESIYGELPEGHSIVLANH 59

Query: 324 LNTMKQNGDLVLLK 365
           LN MK NGDLV  K
Sbjct: 60  LNQMKDNGDLVFAK 73


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